Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq430 105 1e-17
>seq430
Length=650307
Score = 105 bits (116), Expect = 1e-17
Identities = 214/306 (70%), Gaps = 14/306 (5%)
Strand=Plus/Minus
Query 35396 GGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACC 35455
|| || |||||||| || || ||||| |||||||| |||| ||||||||| |||| ||
Sbjct 88324 GGTGACTTGGGACCTGTTTATGGATTTCAATGGCGACATTATGGTGCTGAGTATG-TAGA 88266
Query 35456 TGTTCTTCC-GATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCT 35514
||| | | | ||||| ||||||| || ||||||||| | || | | || || |
Sbjct 88265 TGTGCATACTGATTACTCTGGAAAAGGCATTGATCAACTTCAAAACGTCATCAATACAAT 88206
Query 35515 GAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATG-GATCTTC 35573
| | || || || ||||| | ||| |||||| ||||||||||| ||| ||| |
Sbjct 88205 CAAAACTAACCCTGACGATAGGCGAATGCTTATGATCGCATGGAATCC-ATGTGATGT-- 88149
Query 35574 ACCT--TATGGCTCTTCCTCCATGCCACATGACTGCT-CAATTTTATGTGGCTAATGGAG 35630
|||| ||||| | || || || || || ||| | || |||| ||| || ||||
Sbjct 88148 ACCTAAAATGGCCTTACCACCGTGTCA-TTGTCTGGTACAGTTTTTTGTCGCCGATGGCT 88090
Query 35631 AATTGTCGTGCCAGTTGTATCAGCGA--AGCGGAGATGTCGGGTTGGGCGTGCCCTTCAA 35688
| ||||||| || |||| || ||| ||| || ||| || | || || ||||| ||
Sbjct 88089 ATCTGTCGTGTCAAATGTACCAACGATCAGCAGACATG--GGTCTAGGAGTACCCTTTAA 88032
Query 35689 TATTGC 35694
||||||
Sbjct 88031 TATTGC 88026
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989280653848375
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |