Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq430 105 1e-17 >seq430 Length=650307 Score = 105 bits (116), Expect = 1e-17 Identities = 214/306 (70%), Gaps = 14/306 (5%) Strand=Plus/Minus Query 35396 GGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACC 35455 || || |||||||| || || ||||| |||||||| |||| ||||||||| |||| || Sbjct 88324 GGTGACTTGGGACCTGTTTATGGATTTCAATGGCGACATTATGGTGCTGAGTATG-TAGA 88266 Query 35456 TGTTCTTCC-GATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCT 35514 ||| | | | ||||| ||||||| || ||||||||| | || | | || || | Sbjct 88265 TGTGCATACTGATTACTCTGGAAAAGGCATTGATCAACTTCAAAACGTCATCAATACAAT 88206 Query 35515 GAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATG-GATCTTC 35573 | | || || || ||||| | ||| |||||| ||||||||||| ||| ||| | Sbjct 88205 CAAAACTAACCCTGACGATAGGCGAATGCTTATGATCGCATGGAATCC-ATGTGATGT-- 88149 Query 35574 ACCT--TATGGCTCTTCCTCCATGCCACATGACTGCT-CAATTTTATGTGGCTAATGGAG 35630 |||| ||||| | || || || || || ||| | || |||| ||| || |||| Sbjct 88148 ACCTAAAATGGCCTTACCACCGTGTCA-TTGTCTGGTACAGTTTTTTGTCGCCGATGGCT 88090 Query 35631 AATTGTCGTGCCAGTTGTATCAGCGA--AGCGGAGATGTCGGGTTGGGCGTGCCCTTCAA 35688 | ||||||| || |||| || ||| ||| || ||| || | || || ||||| || Sbjct 88089 ATCTGTCGTGTCAAATGTACCAACGATCAGCAGACATG--GGTCTAGGAGTACCCTTTAA 88032 Query 35689 TATTGC 35694 |||||| Sbjct 88031 TATTGC 88026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989280653848375