Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_004678.1
Length=16784
Score E
Sequences producing significant alignments: (Bits) Value
seq2620 865 0.0
seq2572 839 0.0
seq2740 125 8e-25
>seq2620
Length=5891
Score = 865 bits (958), Expect = 0.0
Identities = 1670/2438 (68%), Gaps = 114/2438 (5%)
Strand=Plus/Minus
Query 2774 TAAACGACATCATAAACTATTACAAGGAG--CAAAAACATGGTAAAACAAAATCGTTTAG 2831
|||| || || ||||||||||| |||| || ||||||| |||| | | ||
Sbjct 5510 TAAATGATATTATAAACTATTAT--GGAGGTCATAAACATG----AACAGACT-----AG 5462
Query 2832 ACATGGTAAGAGATTATCAAAATGCTGTCAATCATGTCAGaaaaaaa-aTCCCAGATAAG 2890
|| || | | | |||||||| | | | || || || |||| || || || | |||
Sbjct 5461 ACGAAGTCAAACAATATCAAAACG-TATTAAACAAGTTTCAAAAGAAGATACCCAAAAAG 5403
Query 2891 TATAATCAAATAGAATTAGTTGATGAACTTATGAATGATGATATAGATTATTATATATCT 2950
|| |||||||||||| | | | | ||||||||||| | ||||| |||| || ||||||
Sbjct 5402 TACAATCAAATAGAACTTGCTAACGAACTTATGAACAAAGATATTGATTTTTTAATATCT 5343
Query 2951 ATTTCAAACCGTTCTGATGGAAAATCGTTCAACTATGTTTCATTTTTTATTTATTTAGCT 3010
||||| |||||||| || || ||| | || ||||| ||||||||||||| | || ||
Sbjct 5342 ATTTCCAACCGTTCAGACGGTAAAACATTTAACTACATTTCATTTTTTATGAAACTATCT 5283
Query 3011 ATTAAACTTGATATAAAATTTACTTTATTATCACGTCATTATACATTACGTGACGCTTAC 3070
|| || | | |||||||||| || | ||||||| ||||| ||||| |||| |||
Sbjct 5282 ATCGAATTAGGTATAAAATTTGTATTGATTGCACGTCACTATACCCTACGTAACGCCTAC 5223
Query 3071 CGTGATTTTATTGAAGAAAT---CATAGATGAAAATCCACTATTTAAATCAAAACGTGTC 3127
||||| | || | |||| ||| || | || ||| ||||| |||| | |
Sbjct 5222 CGTGAACTGATAAATAAAATAGCCATGGAGCATGATG-ACT--TTAAAGAAAAA-GACTT 5167
Query 3128 ACGTT--CAGAAGTGCTAGGGACTATTTAGCTATTATCTATCAAGATAAAGAAAT--TG- 3182
| | ||| || | |||||| | | || ||| | |||||||| ||
Sbjct 5166 ATTTATGCAGC-GTACAGATGACTATATTAATGTTGGTTAT---GGTAAAGAAAGCATGT 5111
Query 3183 GTGTGATTACAGATTTGAATAGTGCCACTGATTTAAAATATCATTCTAACTTTTTAAAAC 3242
|| | |||||||| || || | ||| ||||||||||||||||| |||||||||||||||
Sbjct 5110 GTATTATTACAGACTTAAACAATGCGACTGATTTAAAATATCACTCTAACTTTTTAAAAG 5051
Query 3243 ACTATCCTATTATTATATATGATGAGTTTTTAGCACTTGAAGATGATTATTTAATTGATG 3302
| ||||| || ||| |||||||||| || ||||| | ||| |||||| ||| ||||
Sbjct 5050 ATTATCCAATCATTGTATATGATGAATTCCTAGCATTAGAAAGTGATTACTTACCAGATG 4991
Query 3303 AGTGGGATAAGTTAAAAACAATATATGAATCAATCGACCGTAACCATGGTAACGTTGATT 3362
| ||||| || | ||||| |||||||| || || ||||||||||| || || | |
Sbjct 4990 AATGGGACAAACTTAAAACCATATATGAGTCTATAGACCGTAACCACGGGAATATACCCT 4931
Query 3363 ATATTGGATTCCCTAAAATGTTTTTACTAGGTAATGCAGTCAACTTTTCAAGTCCTATAT 3422
|| | | | | |||||||| | || ||||||||||||| |||||||| ||||| ||
Sbjct 4930 ATTTGGAAATACCTAAAATAGTATTGTTAGGTAATGCAGTTAACTTTTCTAGTCCCCTAC 4871
Query 3423 TATCCAATTTAAATATATACAATTTATTACAAAAGCATAAAATGAATACATCAAGACTTT 3482
| | || ||||| |||| |||| | | | || || ||||| || | | | |
Sbjct 4870 TTGCGAACTTAAACATATTCAATAAACTTGAGAAACACAAAATCAACTCTATGCGTCAGT 4811
Query 3483 ACAAAAACAtttttttAGAAATGCGACGAAACGATTACGTGAATGAAAAACGTAACACAC 3542
| || | || | |||||| |||| || || | |||||||||||||| ||
Sbjct 4810 ATGGTAATGTATTACTTGAAATGAGACGTAATGACAATTCAAATGAAAAACGTAATACTA 4751
Query 3543 GTGCGTTTAATTCAAATGAC---GACGCTATGACAACTGGAGAATTTGAATTTAACGAAT 3599
| || || | | |||| || || |||||||| || |||||||| |||||| | |
Sbjct 4750 GGGCTTTCGAC---AGTGACAATGATGCAATGACAACCGGTGAATTTGATTTTAACAATT 4694
Query 3600 ATAATTTGGCGGATGATAATTTAAGAAATCACATCAATCAAAACGGTGATTTCTTCTATA 3659
| ||||| || ||||| ||| | ||||| || | | ||||||||||||||||||| |
Sbjct 4693 ACAATTTAGCCGATGACGGATTACGCAATCATATTAGTAAAAACGGTGATTTCTTCTACA 4634
Query 3660 TCAAAACTGATGATAAATATATTAAAGTCATGTATAATGT-AACTACTTTTATGACA--- 3715
||||||| || ||| |||||||||||| |||||||| || ||| ||| | |||
Sbjct 4633 TCAAAACCGAAGATGCATATATTAAAGTGATGTATAACGTGAACGACTAT----ACAGTT 4578
Query 3716 AATATTATCGTTGTACCATATACAAAACAATATGAATTTTGTACTAAAATTAGGGATATA 3775
||||| | ||| | |||||| || |||||||| ||| ||||| || || | ||| |
Sbjct 4577 AATATGAAAGTTATTCCATATGCAGAACAATATACATTCTGTACAGAAGTTCGTGATGTT 4518
Query 3776 GACAATCATGTTACCTATTTACGTGATGATATGTTTTATAAAGAAA-ACATGGAACGTTA 3834
|| || | | |||||||||| || | || | ||||||||| ||||| || | |
Sbjct 4517 GAGGATAAAGCTACCTATTTAAAAGAAAACATCT---ATAAAGAAACACATGCAAAGAAA 4461
Query 3835 TTACTACAATCCAAGCAATTTACATTTTGACAATGCTTACTCTAAAAATTACGTGGTTGA 3894
| | || || || || ||||||||||| || || || || ||| || | ||| |
Sbjct 4460 T-ATTATAAACCGTCTAACTTACATTTTGATAACGCCTATTCAAAATCATATATTGTTAA 4402
Query 3895 TAATGATAGA-TANNNNNNNNNNNNNNNnaataaaattataaaatttcatataaaaaatg 3953
||| ||| | || || ||| |||||||||| | || | | |
Sbjct 4401 CAAT-ATACAATACATTGATTTAAACATTAACAAAGTTATAAAATTGTACATTACACAAC 4343
Query 3954 aaatgaagaaaaatatgagtgagtttgaaagaaaagaaaaaatatacgaagataactata 4013
| | || ||| | ||| ||||||||| | |||||||| ||||||||||||||||
Sbjct 4342 AGAAAAAATTAAACCCAACTGATTTTGAAAGACACGAAAAAATGTACGAAGATAACTATA 4283
Query 4014 taga--gaa-tacgaaaaag-----TA------------TCTAAT--------GAAACA- 4044
|||| ||| || |||||| || | |||| |||||
Sbjct 4282 TAGAAAGAACTAAGAAAAACCTTGTTAAACAAATGAGATTATAATTGCGTGACGAAACGC 4223
Query 4045 --------ATA--TGGCTTATAA------AAGGTGTGTAAGATTATGGGATTACTAGAAT 4088
||| || |||| | |||| |||||||| ||||||||| | ||
Sbjct 4222 AACGTGATATAATTGTTTTATTAGCAATTAAGGAGTGTAAGAC-ATGGGATTATTGGAGG 4164
Query 4089 GCATGCAATATCATAAACATGAACGTCGAATGATTTTATACTGGGATATAGAAACATTAG 4148
|||||| |||||| |||| ||||| ||||| |||||||| ||||| ||||
Sbjct 4163 CAATGCAAACACATAAAGGCTTACGTAAAATGACGTTATATTGGGATATTGAAACCTTAG 4104
Query 4149 CGTACAATAAAGTTAACGGACGaaaaaaaCCAACCAAATATAAAAACGTTACTTATTCTG 4208
| ||||| || | | ||| ||||| ||||||| | |||||||||||| |||| ||
Sbjct 4103 CATACAACAAGATAGAGGGAAGAAAACAACCAACTGACTATAAAAACGTTGTTTATAGTG 4044
Query 4209 TAGCAATTGGTTGGTTTAATGGTTATGAA--ATTGATGTTGAAGTATTTCCGAGTTTCGA 4266
|||| |||||||| |||| | ||| ||||| ||||| || ||||| ||| |
Sbjct 4043 TAGCTGTTGGTTGGGATAATCA--AGGAACAATTGACGTTGAGGTTTTTCCCTCTTTTAA 3986
Query 4267 ATCTTTTTATGACGCATTTTATACGTATGTGAAAAGACGTGATACAATCACAAAATCAAA 4326
|| || | | | |||| | || ||||| || | || ||||| || |||||
Sbjct 3985 CTCATTCTTTAAAACATTCTTTAAGTATGCAGAACGCAAAGACACAATAACGAAATCTCG 3926
Query 4327 AACAGATATTATCATGATTGCACATAACTGTAATAAATACGATAATCATTTTTTACTTAA 4386
||| ||| |||||||| |||||||||||||| || || ||||| ||||||||| |
Sbjct 3925 TACATCAATTGAAATGATTGCGCATAACTGTAATAAGTATGACAATCACTTTTTACTTCA 3866
Query 4387 AGACACCATGCGTTATTTTGA---TAATATTACACGCGAAAATATATATTTAAAATCTGC 4443
|| | | | || || | |||| | | | |||||| | | | ||||| ||
Sbjct 3865 CGATA---TACAACATATTTACCCTAATGTAAAAGTTGAAAATTTGTTCATGAAATCAGC 3809
Query 4444 AGAAGAAAATGAACACACATTAAAAATGAAAGAGGCTACTATTTTAGCCAAAAATCAAAA 4503
|||| ||||||| |||| | || |||||||| |||| | || ||| | | ||
Sbjct 3808 AGAAACAAATGAAAACACTGTTAATATGAAAGAAGCTAAAACAGACGCTAAAGAAGATAA 3749
Query 4504 TGTAATTTTAGAAAAACGTGTTAAATCTTCAATCAATTTAGATTTAACAATGTTTTTAAA 4563
| | |||||||||||||||||||||||||||| |||||||| | | | || ||| |
Sbjct 3748 TATTGTTTTAGAAAAACGTGTTAAATCTTCAATTAATTTAGACCTTATTTTTTTCTTACA 3689
Query 4564 TGNNNNNNNNTTTAATATTATTGATAACTTTATGAAAACCAATACATCAATTGCAACATT 4623
| ||| || |||||||||| |||||||| | ||||| ||||| |||||
Sbjct 3688 AGGTTTTAAATTTGTCGTTGTTGATAACTTCATGAAAACAACAACATCTATTGCCACATT 3629
Query 4624 AGGTAAGAAATTACTTGATGGTGGTTATTTAACAGAATCACAACTTAAAACAGATTTTAA 4683
||| || ||| | || ||||| ||| | ||| | |||||||||||||| ||| |
Sbjct 3628 AGGAAAAAAACTCAAAGACGGTGGATATCTTACATCAGACCAACTTAAAACAGACTTTCA 3569
Query 4684 TTATACGATTTTTGATAAAGATAATGATATGAATGATAGTGAAGCCTATGACTATGCTGT 4743
||| || ||||||| || | |||||| ||||| ||| |||| || |||
Sbjct 3568 ATATGATATCTTTGATATTGAAGAGGATATGGATGATGTAGAAAGTTATGCTTACGCTTA 3509
Query 4744 GAAATGTTTTGCAAAACTCACACCTGAACAACTTACATACATTCATAATGACGTGATTAT 4803
|||||||| |||||| ||| ||| | || |||||| | |||||||| |||||
Sbjct 3508 TGAATGTTTTAAAAAACTAGATAATGACCAAATGACTTACATTAACAATGACGTTATTAT 3449
Query 4804 ATTAGGTATGTGCCATATTCATTATAGTGATATATTTCCAAATTTTGACTATAACAAATT 4863
|||||| || ||||| |||||| ||||||||| ||||| ||||| ||| ||| |
Sbjct 3448 TTTAGGTCAATGTCATATACATTATTCTGATATATTCCCAAACTTTGATTATTCAAAAAT 3389
Query 4864 AACATTTTCATTGAATATTATGGAATCTTACTTGAATAATGAAATGACACGTTTTCAGTT 4923
|| ||| | || || | ||| ||| |||| ||||| | || ||||||| |
Sbjct 3388 GACGTTTAGTGTAAACATCTTAGAAAGTTATATGAACAATGATTTTACCGGTTTTCAACT 3329
Query 4924 ACTCAACCAATATCAAGATATTAAAATATCTTATACAC--ATTATCATTTCCATGATATG 4981
||| || || || | | || | ||| | |||||| ||||| |||| |||| |
Sbjct 3328 ACTTAA-TAAAAT-AGGCGATGGACGTATTTCATACACAGATTATTATTTTCATGGTCGT 3271
Query 4982 AATTTTTATGACTATATTAAATCATTCTATCGTGGTGGTTTAAATATGTATAACACCAAA 5041
|| ||||||||||||| ||| || || |||||||||||||||||||||| | |||
Sbjct 3270 AACCTTTATGACTATATCAAAGGTTTTTACAATGGTGGTTTAAATATGTATAACCCTAAA 3211
Query 5042 TACA-TAAACAAACTAATTGATGAGCCTTGTTTTTCTATTGACATCAATTCGAGTTATCC 5100
|||| | ||||| | ||| |||||||||||||||||||||| || |||||| |||||
Sbjct 3210 TACATTGGACAAA-TTATTAATGAGCCTTGTTTTTCTATTGATATAAATTCGTCATATCC 3152
Query 5101 TTATGTGATGTATCATGAAAAAATTCCAACATGGTTAT 5138
|||||| ||||||||||| ||||| ||||| | ||||
Sbjct 3151 TTATGTAATGTATCATGAGAAAATACCAACTTACTTAT 3114
Score = 370 bits (410), Expect = 1e-98
Identities = 521/721 (72%), Gaps = 13/721 (2%)
Strand=Plus/Minus
Query 5404 TGAATGTGAATACTTTCATGCACGTGATATTATTTTTCAAAACTATTTTATTAAAACACA 5463
||| |||||||| ||| ||| | ||||| || ||||||||||||||||||||||
Sbjct 2836 TGACTGTGAATATTTTGGTGCTAGGGATATCATACACGAAAACTATTTTATTAAAACACA 2777
Query 5464 AGGTAAGTTAAAAAACAAAATCAATATGACATCACCTTACGACTATCACATTACTGATGA 5523
|||||| | |||| |||||| ||||| | ||||||| |||||| || || || ||
Sbjct 2776 AGGTAAACTCAAAACCAAAATAGATATGCCTACACCTTATGACTATACAATCACAGACGA 2717
Query 5524 TATCAACGAA-CACCC-ATACTCAAATGAGGAGGTTATGTTATCTAAAGTCGTTTTAAAT 5581
|| ||| || ||| | | ||| || ||||||||||| ||||| || | |||
Sbjct 2716 GCCAAATGAAACAGTTTATAGTGA--TGAAGAAGTTATGTTATCAAAAGTTGTACTTAAT 2659
Query 5582 GGATTATATGGCATACCTGCATTACGTTCACATTTTAACTTATTCCGTTTAGATGATAAC 5641
||||||||||| || ||||| |||||||||| ||||| ||||||||| |||||| ||
Sbjct 2658 GGATTATATGGTATTCCTGCCCTACGTTCACACTTTAATTTATTCCGTAAAGATGAAGAC 2599
Query 5642 AATGAACTATACAATATCATTAACGGTTACAAAAACACTGAACGTAATATATTATTCTCT 5701
| |||| || || ||||| ||||||||||| || ||||| |||||||||||||||
Sbjct 2598 GGTTTTTTATATAACATGATTAATGGTTACAAAAATACAGAACGAAATATATTATTCTCT 2539
Query 5702 ACATTTGTCACATCACGTTCATTGTATAACTTATTGGTTCCTTTCCAATACTTAACGGAA 5761
|| ||||| || |||| ||| | ||||| || | | || || ||| ||||||| ||
Sbjct 2538 ACCTTTGTTACGTCACAATCACTTTATAATCTACTTGAGCCATTACAAGACTTAACACAA 2479
Query 5762 AGTGAAATTGACGACAATTTTATTTATTGCGATACTGATAGTTTGTATATGAAATCCGTT 5821
| |||||||||||||| ||||| || || ||||| |||||||| ||| | ||||| |
Sbjct 2478 AAAGAAATTGACGACAACTTTATATACTGTGATACAGATAGTTTATATCTTAAATCAGCG 2419
Query 5822 GTTAAA-CCCTTATTGA-ACCCCAGTTTATTCGACCCGATAGCCTTAGGTAAATGGGATA 5879
||||| ||||| | || || |||||||||||| | ||||||||||||||
Sbjct 2418 ATTAAAGATAAGATTGACGCTTCAATT--TTCGACCCGATATCGTTAGGTAAATGGGACG 2361
Query 5880 TTGAAAACGAACAGATAGATAAGATGTTTGTACTGAATCATAAGAAATATGCATA---TG 5936
|||| || || | || || || |||| |||| | || |||||||||||||| || |
Sbjct 2360 TTGAGAATGACCGTATTGAAAAAATGTATGTATTAAACCATAAGAAATATGCTTACCTTA 2301
Query 5937 AAGTGAATGGAAAGATTAAAATTGCTTCTGCTGGTATACCGAAAAACGCCTTTGATACA- 5995
|| || ||||| || | | || || ||| | ||| | |||| ||| | |||
Sbjct 2300 AACCAAACGGAAAAATCCATGTAGCAAGCGCAGGTGTGCCGTTAGACGCGTTTAACACAG 2241
Query 5996 AGCGTCGATTTTGAAACCTTTGTACGTGAACAATTCTTTGACGGTGCCATTATTGAAAAC 6055
||| | || || |||| | | | | || | ||||||| |||| | ||
Sbjct 2240 AGCAATCA-TTCGAGGACTTTATTAATAATGACTTTCATCACGGTGCTGTTATCTACAAT 2182
Query 6056 AATAAAAGTATCTATAATGAGCAAGGTACAATATCGATATATCCGTCTAAAACTGAAATT 6115
|||||||||||||||||| | |||||||| || || ||||||||||| |||| | |||
Sbjct 2181 AATAAAAGTATCTATAATAAACAAGGTACCATTTCAATATATCCGTCAGAAACACATATT 2122
Query 6116 G 6116
|
Sbjct 2121 G 2121
Score = 89.7 bits (98), Expect = 6e-14
Identities = 111/152 (73%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 7951 AATTTATCTTTAATTTGTTCTGGTACTAATACGTCCATTTCTGCACAATTTTCTACAATA 8010
||||||||||||||||||||||| | | ||| | ||||||||| ||||||||| |||
Sbjct 154 AATTTATCTTTAATTTGTTCTGGAAATGGTACATTCATTTCTGCTAAATTTTCTAATATA 95
Query 8011 GAAAGTCCCTCATTTGCAATATAATAAAATATTGTAATCATGAGTAGACCACCTTTTAAT 8070
| ||||| | ||||| ||||| || || ||| || | || |||| |||||
Sbjct 94 CTTAAACCCTCTGTAGCAATGTAATAGAACATGATAACTATTACTAATGCACCGTTTAAG 35
Query 8071 TGTAAAATCTGGTCAATGATGTTTGCTAAAAT 8102
| ||| || | |||||| || || | || |||
Sbjct 34 TTTAATATGTTGTCAATAATATTAGATATAAT 3
>seq2572
Length=8270
Score = 839 bits (930), Expect = 0.0
Identities = 1502/2167 (69%), Gaps = 66/2167 (3%)
Strand=Plus/Minus
Query 13398 CAAATGCTTCAACTGTTTGTCTGTTGATTTCTCTATCTAAAAAATGAATCGTAAATGATT 13457
|||| | ||| || |||||||| | || ||||||||||| ||| | | ||||||||
Sbjct 2141 CAAAGGATTCGACGGTTTGTCTACTAATCTCTCTATCTAAGAAACGTGTAACAAATGATT 2082
Query 13458 TTTTAAAAA----GTAAATCTGATAATTCATCTTTCAATGAAAAACCTTTAAATACTTTT 13513
||||||| || ||| || ||| ||| | || ||| |||||||| | ||
Sbjct 2081 GTTTAAAATAACGGTCAATATG----TTCGTCTGTAAAGTGAAATCCTTTAAAAAAGGTT 2026
Query 13514 TCATTAACGATAGCTAAAACGTCTTTGTCGAACTTCAGCATTTTTTGCATGAATTGAAAT 13573
|| | ||||| | ||| || | ||| || || || |||||| ||||||||| |
Sbjct 2025 TCGTCTACGATTTTTTTAACATCATCGTCAAAACGCATCACTTTTTGAATGAATTGATAA 1966
Query 13574 TCATCATCATAAAACGTTAATTTATTATCATTTACAAATTCATTGAAACCTTTTTTAATC 13633
||| | || || ||||||| | ||| ||||||||||| || |||||| ||
Sbjct 1965 TCAAAGTTATCAATGGTTAATTGTCCGTTATTAACAAATTCATTAAATCCTTTTCTATCT 1906
Query 13634 AATTCTGATTTAATGAAATCGTATAAAGTCATTGTGTATCTAGCCATTTATATCAC-TGC 13692
||||| | ||||| || |||| || |||| |||||||||| || || ||| | |
Sbjct 1905 AATTCACTCTCAATGATTTCAAATAAGGTTGTTGTATATCTAGCCACTTGTACCACCTCC 1846
Query 13693 TT--TCATCTTTAAAAAGTGTGTCTACCATTGATATTTTAGACGTTGTTTCATCATCGTA 13750
| | || || | ||| | | || || | | || |||| ||||||||| ||
Sbjct 1845 GTAGTTGTCGGTAGCCA-TGTTTTGAATATCGACTTGT--GATGTTGCTTCATCATCATA 1789
Query 13751 ATACGGTT-TAATATCTAAACCATAACGCTTTGATAAAAACGTA-ATTGGTTCACGACCT 13808
||| || | |||| ||||| || |||| || | | || | | || ||||||||||
Sbjct 1788 ATAAGGGTGTAAT-TCTAACCCGAAACG-TTGGTTTAACATTTCTATACTTTCACGACCT 1731
Query 13809 TTTAAATAGATATTACTGTTTGATGTGGTAAATCCACGATTACTTTTTGCCTCTTCGTCT 13868
||||||| || || ||| || || |||||| ||| ||||||||||| ||| ||
Sbjct 1730 CTTAAATAAATGTTTGAGTTAGACGTTGTAAATGAACGGTTACTTTTTGCTTCTGTATCA 1671
Query 13869 GAAACACCGCTTTCTTTATCAACGGCTAATGAATTAATGCCTAAATAGTTACTTAATTCA 13928
|||||||||||||||||||| ||||| || |||| ||||| ||||| || ||||
Sbjct 1670 CTCACACCGCTTTCTTTATCAACAGCTAAAGAGTTAACACCTAAGAAGTTAGATAGTTCA 1611
Query 13929 CTAATTTTGTTTTGATATTCCCGTTTCATTTCAGTTAATGCTGGGATTACGCTATTACTT 13988
|| ||||||||||||||||| |||||||||||| | ||| | | ||| || ||||
Sbjct 1610 CTTATTTTGTTTTGATATTCTCGTTTCATTTCAACGAGTGCATTGTTAACGTAATCACTT 1551
Query 13989 GTTAAATCAATGATATCGTCATCTGCATTAAACATAGGTGACAT--TTTAACAAATGGTG 14046
| ||| || || || || || || |||| ||| || || | ||||| || ||||
Sbjct 1550 GCTAAGTCTATAATGTCCTCTTCAGCATCAAA--TAATCCACTTACTTTAATGAAAGGTG 1493
Query 14047 CACCGTTATAT-ATTTCGGACACAAGTTGATTGATTGACTCGTCATTAATTTCTGATTTA 14105
|| ||| | | || | | | |||||| |||| || || |||| ||| |||||
Sbjct 1492 AGCCATTAAAACAATTGAGTGATGAATTGATTAATTGTTTCATCGTTAACTTCCGATTTG 1433
Query 14106 AATATCTTGCTAAATTTTGCTTGCATGATTAAAGAAAAGCGAGATAAAGCAACTTCTGCT 14165
||||| || |||||| | |||||| || | ||||| ||| |||| | |||||||
Sbjct 1432 AATATTTTAGCAAATTTGGATTGCATAATAAGTGAAAAACGACTTAAAATGATTTCTGCT 1373
Query 14166 AATTCATCAGTATAATGTTCTATAATTTCTATA-TCACTATTATATTGA-ATTGGTTTAT 14223
||||||||| ||| ||| |||||| | ||| ||| |||| || || | ||||||||
Sbjct 1372 AATTCATCACAATAGTGTGAAATAATTGC-ATAGTCATTATT-TAGTGTTACTGGTTTAT 1315
Query 14224 TTTGCATGACAACAAAGTTACCACTCATACAGTTATCATATAGCTTATGAATTTGTAGAC 14283
|| ||| |||| ||| | ||| |||| || ||||| | || |||| || |
Sbjct 1314 TTCTCATAACAATAAAATCACCTGATTTACAATTGTCATAA---TATTGTATTTCTAAAG 1258
Query 14284 AATCATCAGGTATTAAATAGTCAGGTACAATAAAATATATATCTTCTTTAGTTAATCGTT 14343
| |||||| ||| || | ||| | | ||||| ||| |||| | |||||||
Sbjct 1257 CGTAATCAGGGCGTAAGTATTTAGGAATAGTAAAACGTATGTCTTTCTCGTTTAATCGGC 1198
Query 14344 TTTGAAATTGGAAATTAAAGTTTGATGAAAAATTTGGTGCT-TGATTAAAGTAAGTGTTA 14402
|| ||| || |||||||| | ||||| | || | ||| | | | | ||
Sbjct 1197 GTTCAAAAGCAAAGTTAAAGTTATTT-AAAAAGTCACCACTATTTTTATAATGATTATTT 1139
Query 14403 TTTACATAACCAAGAATCATAATTTGCTTATTTCTAGCTTCACCAACAACTACATTAATG 14462
| || |||||| || ||||||||||| | ||||||||| | |||||||||||| | |
Sbjct 1138 TCTATATAACCTAGTATCATAATTTGGTCATTTCTAGCCTTACCAACAACTACCTGATAA 1079
Query 14463 TTTTGTCTTAAAGCTGATTCTAACTGAATAAAATCTATACCAACCGTATCACGATTGGTA 14522
||| | ||| || | |||||| || | |||||||||| || || ||| |||
Sbjct 1078 CCTTGACGTAATGCAGTTTCTAATTGTAAAAAATCTATAGACACGCTACGTTTATTTGTA 1019
Query 14523 TAGTTGATTAGTAGCGGTAAAAATTCCAAATAACGATTAAACATAAGACGTTTAAATCTG 14582
||||| || ||||| |||| ||||||||||||||||||||| ||||| | |||||
Sbjct 1018 TAGTTAATCAGTAGGGGTAGAAATTCCAAATAACGATTAAAAATAAGCCTACGAAATCGA 959
Query 14583 TTGCGATGTTCAACAACTCTTTTGCTGATTTCCTTTGATAACTCAACGTTTAAAC----- 14637
|| | |||||| | ||| | ||| || |||| |||||||| |||| |||
Sbjct 958 TTTCTATGTTCGATAACACGCAGGCTTATGTCCTCAGATAACTCT--GTTTCAACGCCAA 901
Query 14638 --------CTCTTTTATCGTTGTTCATAT------TTTACGCTCCTTTTATTCTTGTAAT 14683
|| ||| | || | || | || |||||||||| | || ||
Sbjct 900 CATGTTCACTATTTGAATGTGATAGATTTGTCATGTTAACGCTCCTTTAAA----GTTAT 845
Query 14684 TCTTCCTCTGGTTTT--GGATTTACATCTTGGTC---AGTAATTAAAATTTTATTAAAGA 14738
||||| ||| | || | | | || | || ||| ||||||||||| || ||||
Sbjct 844 TCTTCTG--GGTCCTCAGGTTGTTCCTCAGGCTCTGAAGTGATTAAAATTTTGTTGAAGA 787
Query 14739 ATGGACTAATGGCTTTAAATGAATAGTAATGAATCCAGTGTGTAACTTCATCAAATTCAG 14798
|||| || | ||| || || || || ||||| |||||||||||||||||||||
Sbjct 786 ATGGTGAAACAGATTTGAAGCTGTAATAGTGTATCCAATGTGTAACTTCATCAAATTCAC 727
Query 14799 GGTTATGGAATGGTGGTTTTAACATACCTTTTGTGTAACGTTTATATTTAATTGAATTAA 14858
||||| ||||||| ||| | |||||| ||||| | |||||| ||||| | | ||||
Sbjct 726 CGTTATAGAATGGTTTTTTAAGCATACCGTTTGTATTACGTTTGTATTTCAAAGCGTTAA 667
Query 14859 TATCCAAAATAAACGCATATAAATCTGATTTTGGTTTAATTTCTTCAACGTTGCCAGTAA 14918
|||| ||||| || || ||| || | ||||||| ||| || || ||| ||
Sbjct 666 TATCGAAAATGAAAGCGAATAGGTCACTATCAGGTTTAACCTCTGTTACATTACCAACAA 607
Query 14919 ACTCTTTAAGTTTAGATACATCATAAGTAAATACAGCACCAACTGGAATTGTATCTCCTA 14978
| || | ||| || | ||| ||||||| | ||| | || || |||| || |
Sbjct 606 ATTCAGTTTGTTGTGAAATGTCAAAAGTAAAAGTTGTACCCTCAGGGATAATATCACCAA 547
Query 14979 ATTGTGATTGATAATCTCCATACGCACGTAAAAAGTCAATTGAATCTTGGTTTTGTAACT 15038
||| | ||||||||| || | ||||||| || |||| || | | || |||
Sbjct 546 TTTGAGCTTGATAATCACCGAAACCACGTAAGTAGGTGATTGTGTCATTTTCTTCTAATG 487
Query 15039 TAAATTCTTTTGTTACTTTAAACACGCCACCTAAGTCGTCAAAACTAATAACGTGATCTG 15098
| | || | ||| ||| |||| || |||||||||||||| ||||| || || ||||
Sbjct 486 TTACATCATCAGTTGTTTTGTACACACCGCCTAAGTCGTCAAAGCTAATTACATGGTCTG 427
Query 15099 TGAAATCAATGCCTGCAATCTGGAATGTGTTTGCAATCTTAGTATCTAA-AAGATAAGAT 15157
| || |||||||||| ||||||||||| ||||| || |||||||| |||| | |||
Sbjct 426 TAAAGTCAATGCCTGATGCTTGGAATGTGTTAGCAATTTTTGTATCTAATAAGA-ATGAT 368
Query 15158 TTTAATGAATCTGTTGTTAAAATCACAATATCTTTTAATTTTGATACAGTTGTATATTGT 15217
|| | ||||||||||||||| ||||||| ||||| || || ||||| || |
Sbjct 367 TTAATACTATCTGTTGTTAAAATAGCAATATCAGACAATTTAGAAACTGTTGTGTAACGA 308
Query 15218 CCAATTGCACCACCTGATGCACGATGTACTTCATTATATTTAGCACTGTTGTTTTGTAAG 15277
||||||| |||||||| ||| || ||||||| ||||| ||||||| ||||| | |
Sbjct 307 CCAATTGACCCACCTGAAGCAGTATTAGCTTCATTGTATTTGTCACTGTTATTTTGCATG 248
Query 15278 TTTAGGATTGCTTCAAAAACTTTGCTTGCTAAATCTTCTTTTGATGTTGCTTTACGTACA 15337
||||| | |||||||| ||||| |||||||||||||||| |||||| || | ||| | |
Sbjct 247 TTTAGTACAGCTTCAAATACTTTACTTGCTAAATCTTCTTGTGATGTAGCGTAACGAATA 188
Query 15338 TTTGTTTCGGATAATTGATTCAATGAGTAATCAACTAACATTGCACGCATTTCTTTTTCT 15397
|||| || |||||||| || | || || ||||| | ||| ||||| ||||||||||||
Sbjct 187 TTTGAGTCAGATAATTGGTTAATTGCATAGTCAACAACCATGGCACGGATTTCTTTTTCT 128
Query 15398 TCTAATACATTAATATCAGAAATTTTCTTTTTGTATACACCTAAAGCGTAATTAGTTGCG 15457
||| ||| |||||||||||||| || || || |||| ||| || || || || |||
Sbjct 127 TCTTCTACGTTAATATCAGAAATCTTTTTCTTCAATACTGCTAGGGCATAGTTTGTAGCG 68
Query 15458 TCTGCTAATGTTTGGAAATTGAAACGTGTATCATTGTTGTTTAATGTGAATTTTTGTTTC 15517
|| |||| || ||| || ||||||| ||| || || |||||||| |||||||||||
Sbjct 67 TCACCTAAGTCTTTGAAGTTAAAACGTGCATCGTTATTATTTAATGTAAATTTTTGTTTT 8
Query 15518 TTCACAA 15524
|| ||||
Sbjct 7 TTAACAA 1
Score = 708 bits (784), Expect = 0.0
Identities = 1055/1479 (71%), Gaps = 21/1479 (1%)
Strand=Plus/Minus
Query 8585 GGTACACTAATTTTCATCGTTAAACCGTTAATGCTATTCGCAATTTGGAATGCGTTGCCC 8644
|||| || |||||||| |||||||||||||| ||||||||||||||||| || || |||
Sbjct 8188 GGTATACCGATTTTCATTGTTAAACCGTTAATACTATTCGCAATTTGGAAAGCATTACCC 8129
Query 8645 ATTTCTGATTCAGTTACAGAAGGTGGTTGTAAGGCTAAATCTTTATATTCAGCTTGTTGT 8704
|||| | |||| || ||||||||||| |||| ||||||||||| ||||||||
Sbjct 8128 ATTTGACTTGAAGTTGTTGACGGTGGTTGTAAAGCTAGGTCTTTATATTCTGCTTGTTGG 8069
Query 8705 TGTTTGTAGAAATTATATTCTTCATTAAACTTACCAAATAAAGCAGTTGGACTTAAATTA 8764
| || || | | ||||| |||||||| |||| |||||| || || || | |||
Sbjct 8068 TTTTGATAATATGTGTATTCATCATTAAATTTACTAAATAATTGTGTCGGGCTGATATTG 8009
Query 8765 CTTGCTACACTCACAGCGTCATAAAAGCGTGATTTCGGGTCGCTACCATTTAATACATTA 8824
||| | ||| | | ||||| || ||||| |||| ||| | | |||
Sbjct 8008 GATGCAATACTTGCCACATCATAGAATTTAGATTTAATGTCGTCACCTGTAGCAATATTT 7949
Query 8825 TCAATACGATTTGTAATTAATTGACTTTCTGCAtttttttGTCGGTTGGCTTGTTGTGAT 8884
| ||||||||| ||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 7948 TGCGCACGATTTGTTATTAATTGACTTTCTGCATTTTTCACACGGTTAGCTTGTTGTGAT 7889
Query 8885 TGTCCTAAGATACCATTATTGATTAATATTGGTACTTGTGCAAAACTATTAAATGTTATA 8944
|||||||| |||||||||| ||||| | |||||||| ||||| |||| |||||| ||
Sbjct 7888 TGTCCTAATATACCATTATCAATTAACACTGGTACTTCAGCAAAGCTATCAAATGTAATT 7829
Query 8945 TTTGTATTTAAGAATGAACCCGTATCAATCAATATTTCTTTATTTTTAGCGAGTATTGGT 9004
|| ||||||||||| || || || |||||||| || ||| | | || |||
Sbjct 7828 GCAGTGTTTAAGAATGACCCTGTGTCTATCAATATCTCACCATTGGTTGATTTAATGGGT 7769
Query 9005 CTGTCGTTTTCAGCACTGTTATAATCTACTGGATATACTCGAACTTCATTATGATAACCA 9064
|| |||| | ||||||| || || ||||| | || ||||||||||||| ||||
Sbjct 7768 TGTTCTGCTTCACCTTTGTTATAGTCAACGGGATAAATTCTAACTTCATTATGAAAACCG 7709
Query 9065 ATAATTGATTTTGTACGTAACTTAACACCAGTTTTTTGTGAAATCTTACCAGCGTCGAGT 9124
||||||||||| || | ||||| ||||| |||| ||| ||||| || ||||| | |
Sbjct 7708 ATAATTGATTTCGTTCTAAACTTCACACCTGTTTCGGGTGTTATCTTCCCTGCGTCTAAT 7649
Query 9125 AACATCGTATTTCCATTCCAGTCATAAAATTCAATTGTCATATACTCATTACGTATCATA 9184
||||| | | || ||||| ||||| ||| ||||| | ||| |||||||| | | |
Sbjct 7648 AACATAGCGTCACCGTTCCATGAATAAACTTCTATTGTAAAATATTCATTACGGACTAAA 7589
Query 9185 TGTTTAAATTCATCTTTTTTAGATAACATCATCTCTTGAAGATTTG-AGAAACTTAATGA 9243
|| | |||| || || |||| | | || || ||| | ||||| |
Sbjct 7588 TGACGTAGTTCAGGTTGATT-GATACCTGCTAAATTTAAAAATTCGTTAAAACTCATATT 7530
Query 9244 TAAATCTTTTAGACTCCATTCttttgatttaccaccctgttttaatgtttttaatcctgt 9303
||||| ||| |||| ||| || ||| ||||||||| || |||||| |
Sbjct 7529 TAAATTAGGTAGTGACCATGTTTTAGAACGGCCATTACTTTTTAATGTGTTCAATCCTTT 7470
Query 9304 aattttttcactggttttaaCGTCCTCTAAGTCTTTTGTATTAATAAAGTCTTTAGGTAA 9363
||| | |||| |||||| || |||| || | ||| |||||| | || |||||
Sbjct 7469 AATATCTTCATCGGTTTTGACACTTACTAAATCACTACTATCAATAAACTTTTCAGGTAT 7410
Query 9364 CATTTGAACCTTTTGAAAGTTTTGCGTAATCCATGGATAGGCACTCATTTTATCCATAAA 9423
|||||| | ||||| |||||||| ||||||||||| || |||||||||||||||||
Sbjct 7409 CATTTGTATTTTTTGGAAGTTTTGAGTAATCCATGGGTATTTGCTCATTTTATCCATAAA 7350
Query 9424 GTTAATAAAGTCACCATATTCCATAACGTATAAGTTGACTGGTGATGTGATATTGTCATA 9483
|||| ||| | || | ||| | |||||| || ||||| || |||| ||||||
Sbjct 7349 ATTAACAAAATTTGAATGTGACATGATGTATAAATTAACTGGACTCGTCATATAGTCATA 7290
Query 9484 AATCGTACCTTTTGACGTATCTAAGTTTGGCTCTTTTTTAGTACCAAATTTCTTTGATAA 9543
| | |||||||| ||||||| || |||||||||||| |||| ||||| || |||||
Sbjct 7289 AGTTAATCCTTTTGAACTATCTAAATTAGGCTCTTTTTTACTACCGAATTTTTTAGATAA 7230
Query 9544 ATCAGCGCTTGACTGGAATAATAC-TAAATTTTCCAAATATTGTTGCATTTGGTTATAAA 9602
||||| ||||| || || | || || | || | || |||||| | | |||
Sbjct 7229 GTCAGCACTTGATTGAAACATAACATAGTTGTTACCAA-ATTGTTCTAAGTAGTTTCTTG 7171
Query 9603 CATAGTTTTTATTTGATACTTTTAACACATCATCATTATTACGTAACATTGGTAACATAT 9662
||||| |||||||| |||| || |||||||||||||||||||| |||||||| |
Sbjct 7170 AATAGTATTTATTTGTCGCTTTCAATACATCATCATTATTACGTAAATAAGGTAACATGT 7111
Query 9663 AGTTATACGTGCG-TTTTGATAAATGTTGACGTTCAATA-TTGACGTTTGAGAGTTGCTC 9720
| | ||| || | ||||| ||||||||||||||| | | || ||||| |||
Sbjct 7110 ATTCATA-TTGAGATTTTGGTAAATGTTGACGTTCCACACGTGCGTTTTGAATGTT-AGA 7053
Query 9721 TAATACATTCCCTTGTGTATACGTCATAATGGTATCAATGACAAAATATATTTTAACCAC 9780
||| ||||| ||||||||||| ||||| || || ||||| || ||| |||| || ||
Sbjct 7052 TAAAACATTACCTTGTGTATAAGTCATGATTGTGTCAATAACCAAAGTCATTTGAATTAC 6993
Query 9781 AACGTCATTCACGTATTCGATTTGGTTTACAAAAGCGTAATATCTTCTATCCTCAAAATC 9840
| || || | ||||| || || |||||||||||||| | ||||| |||||| |
Sbjct 6992 ATTATCGTTAATATATTCAATCGCATTAACAAAAGCGTAATAACGTCTATTCTCAAACCC 6933
Query 9841 TGATAAAAACGTCATGTAGTTAATACCTTGTGCGTCATGCCACTGCATAT---CAACATT 9897
|||| ||||| |||||||||||||| || ||| ||| | ||| | || ||
Sbjct 6932 TGATTTGAACGTACAATAGTTAATACCTTGAGCTTCACTCCAATTCATTTGTGGTACTTT 6873
Query 9898 GATTTCCAT---TCTATCACGTATAAAATTATACGGTTGTTTTGAATAGTCTAA-CGATT 9953
| | || | || |||||||||||| | || |||| || |||| | ||
Sbjct 6872 AA---CAATGGAGCGGTCGCGTATAAAATTAAATGGGATTTTTTCGTA-ACTAATTGCTT 6817
Query 9954 TAAAATGACGACCATTTAAAAAATAATCATCACGTTCTTTATTACTATTAAAATGAATCG 10013
||||||| | ||||||| |||| ||||||||||||| |||||| ||||||| ||||
Sbjct 6816 TAAAATGTCCACCATTT-AAAAGTAATCATCACGTTGCGCATTACTGCTAAAATGTATCG 6758
Query 10014 TGTTTTGATAGTCTG-TAAACGGTGTGTTATAGAAAAAC 10051
|||||||||| |||| |||| ||||||| ||||||||||
Sbjct 6757 TGTTTTGATAATCTGTTAAAAGGTGTGTCATAGAAAAAC 6719
>seq2740
Length=4841
Score = 125 bits (138), Expect = 8e-25
Identities = 183/255 (72%), Gaps = 4/255 (2%)
Strand=Plus/Plus
Query 7931 TATCATTTTTAATGACTCTTAATTTATCTTTAATTTGTTCTGGTACTAATACGTCCATTT 7990
||||| ||||||| ||| | ||| || ||||| | || |||||||| ||||||
Sbjct 1249 TATCACTTTTAATAACTTGAAGTTTTTCAGCAATTTCCTTAGGAACTAATACACCCATTT 1308
Query 7991 CTGCACAATTTTCTACAATAGAAAGTCCCTCATTTGCAATATAATAAAATATTGTAATCA 8050
| || |||||||||||||| | ||| |||||||| | ||||||| || ||||||||
Sbjct 1309 CAGCGCAATTTTCTACAATGCTTAATCCTTCATTTGCTAAGTAATAAAGTAATGTAATCA 1368
Query 8051 TGAGTAGACCACCTTTTAATTGTAAAATCTGGTCAATGATGTTTGCTAAAATGATAATAC 8110
| | || ||||| |||| | | || || || || || || |||||||| |||||||
Sbjct 1369 TTAACAGTCCACCATTTAGCTCAAGTATTTGATCTATAATATTAGCTAAAATAATAATAC 1428
Query 8111 AGAATATCAATAATTTTTTAGAAAATCCTCTCATTGAtttttttGACCATAAGTTATTAT 8170
| ||||||| | |||| | | ||| || ||| ||||| ||||| | |||
Sbjct 1429 A-AATATCATCATTTTTCTCGCAAA-CCAAACATGGATTTACGACTCCATA--TGATTTG 1484
Query 8171 TTTTAATTGCTTTTG 8185
|||||| ||||||||
Sbjct 1485 TTTTAAATGCTTTTG 1499
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 53575575136925
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |