Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_004679.1
Length=18227
Score E
Sequences producing significant alignments: (Bits) Value
seq2620 865 0.0
seq2572 839 0.0
seq2740 125 8e-25
>seq2620
Length=5891
Score = 865 bits (958), Expect = 0.0
Identities = 1670/2438 (68%), Gaps = 114/2438 (5%)
Strand=Plus/Minus
Query 2778 TAAACGACATCATAAACTATTACAAGGAG--CAAAAACATGGTAAAACAAAATCGTTTAG 2835
|||| || || ||||||||||| |||| || ||||||| |||| | | ||
Sbjct 5510 TAAATGATATTATAAACTATTAT--GGAGGTCATAAACATG----AACAGACT-----AG 5462
Query 2836 ACATGGTAAGAGATTATCAAAATGCTGTCAATCATGTCAGaaaaaaa-aTCCCAGATAAG 2894
|| || | | | |||||||| | | | || || || |||| || || || | |||
Sbjct 5461 ACGAAGTCAAACAATATCAAAACG-TATTAAACAAGTTTCAAAAGAAGATACCCAAAAAG 5403
Query 2895 TATAATCAAATAGAATTAGTTGATGAACTTATGAATGATGATATAGATTATTATATATCT 2954
|| |||||||||||| | | | | ||||||||||| | ||||| |||| || ||||||
Sbjct 5402 TACAATCAAATAGAACTTGCTAACGAACTTATGAACAAAGATATTGATTTTTTAATATCT 5343
Query 2955 ATTTCAAACCGTTCTGATGGAAAATCGTTCAACTATGTTTCATTTTTTATTTATTTAGCT 3014
||||| |||||||| || || ||| | || ||||| ||||||||||||| | || ||
Sbjct 5342 ATTTCCAACCGTTCAGACGGTAAAACATTTAACTACATTTCATTTTTTATGAAACTATCT 5283
Query 3015 ATTAAACTTGATATAAAATTTACTTTATTATCACGTCATTATACATTACGTGACGCTTAC 3074
|| || | | |||||||||| || | ||||||| ||||| ||||| |||| |||
Sbjct 5282 ATCGAATTAGGTATAAAATTTGTATTGATTGCACGTCACTATACCCTACGTAACGCCTAC 5223
Query 3075 CGTGATTTTATTGAAGAAAT---CATAGATGAAAATCCACTATTTAAATCAAAACGTGTC 3131
||||| | || | |||| ||| || | || ||| ||||| |||| | |
Sbjct 5222 CGTGAACTGATAAATAAAATAGCCATGGAGCATGATG-ACT--TTAAAGAAAAA-GACTT 5167
Query 3132 ACGTT--CAGAAGTGCTAGGGACTATTTAGCTATTATCTATCAAGATAAAGAAAT--TG- 3186
| | ||| || | |||||| | | || ||| | |||||||| ||
Sbjct 5166 ATTTATGCAGC-GTACAGATGACTATATTAATGTTGGTTAT---GGTAAAGAAAGCATGT 5111
Query 3187 GTGTGATTACAGATTTGAATAGTGCCACTGATTTAAAATATCATTCTAACTTTTTAAAAC 3246
|| | |||||||| || || | ||| ||||||||||||||||| |||||||||||||||
Sbjct 5110 GTATTATTACAGACTTAAACAATGCGACTGATTTAAAATATCACTCTAACTTTTTAAAAG 5051
Query 3247 ACTATCCTATTATTATATATGATGAGTTTTTAGCACTTGAAGATGATTATTTAATTGATG 3306
| ||||| || ||| |||||||||| || ||||| | ||| |||||| ||| ||||
Sbjct 5050 ATTATCCAATCATTGTATATGATGAATTCCTAGCATTAGAAAGTGATTACTTACCAGATG 4991
Query 3307 AGTGGGATAAGTTAAAAACAATATATGAATCAATCGACCGTAACCATGGTAACGTTGATT 3366
| ||||| || | ||||| |||||||| || || ||||||||||| || || | |
Sbjct 4990 AATGGGACAAACTTAAAACCATATATGAGTCTATAGACCGTAACCACGGGAATATACCCT 4931
Query 3367 ATATTGGATTCCCTAAAATGTTTTTACTAGGTAATGCAGTCAACTTTTCAAGTCCTATAT 3426
|| | | | | |||||||| | || ||||||||||||| |||||||| ||||| ||
Sbjct 4930 ATTTGGAAATACCTAAAATAGTATTGTTAGGTAATGCAGTTAACTTTTCTAGTCCCCTAC 4871
Query 3427 TATCCAATTTAAATATATACAATTTATTACAAAAGCATAAAATGAATACATCAAGACTTT 3486
| | || ||||| |||| |||| | | | || || ||||| || | | | |
Sbjct 4870 TTGCGAACTTAAACATATTCAATAAACTTGAGAAACACAAAATCAACTCTATGCGTCAGT 4811
Query 3487 ACAAAAACAtttttttAGAAATGCGACGAAACGATTACGTGAATGAAAAACGTAACACAC 3546
| || | || | |||||| |||| || || | |||||||||||||| ||
Sbjct 4810 ATGGTAATGTATTACTTGAAATGAGACGTAATGACAATTCAAATGAAAAACGTAATACTA 4751
Query 3547 GTGCGTTTAATTCAAATGAC---GACGCTATGACAACTGGAGAATTTGAATTTAACGAAT 3603
| || || | | |||| || || |||||||| || |||||||| |||||| | |
Sbjct 4750 GGGCTTTCGAC---AGTGACAATGATGCAATGACAACCGGTGAATTTGATTTTAACAATT 4694
Query 3604 ATAATTTGGCGGATGATAATTTAAGAAATCACATCAATCAAAACGGTGATTTCTTCTATA 3663
| ||||| || ||||| ||| | ||||| || | | ||||||||||||||||||| |
Sbjct 4693 ACAATTTAGCCGATGACGGATTACGCAATCATATTAGTAAAAACGGTGATTTCTTCTACA 4634
Query 3664 TCAAAACTGATGATAAATATATTAAAGTCATGTATAATGT-AACTACTTTTATGACA--- 3719
||||||| || ||| |||||||||||| |||||||| || ||| ||| | |||
Sbjct 4633 TCAAAACCGAAGATGCATATATTAAAGTGATGTATAACGTGAACGACTAT----ACAGTT 4578
Query 3720 AATATTATCGTTGTACCATATACAAAACAATATGAATTTTGTACTAAAATTAGGGATATA 3779
||||| | ||| | |||||| || |||||||| ||| ||||| || || | ||| |
Sbjct 4577 AATATGAAAGTTATTCCATATGCAGAACAATATACATTCTGTACAGAAGTTCGTGATGTT 4518
Query 3780 GACAATCATGTTACCTATTTACGTGATGATATGTTTTATAAAGAAA-ACATGGAACGTTA 3838
|| || | | |||||||||| || | || | ||||||||| ||||| || | |
Sbjct 4517 GAGGATAAAGCTACCTATTTAAAAGAAAACATCT---ATAAAGAAACACATGCAAAGAAA 4461
Query 3839 TTACTACAATCCAAGCAATTTACATTTTGACAATGCTTACTCTAAAAATTACGTGGTTGA 3898
| | || || || || ||||||||||| || || || || ||| || | ||| |
Sbjct 4460 T-ATTATAAACCGTCTAACTTACATTTTGATAACGCCTATTCAAAATCATATATTGTTAA 4402
Query 3899 TAATGATAGA-TANNNNNNNNNNNNNNNnaataaaattataaaatttcatataaaaaatg 3957
||| ||| | || || ||| |||||||||| | || | | |
Sbjct 4401 CAAT-ATACAATACATTGATTTAAACATTAACAAAGTTATAAAATTGTACATTACACAAC 4343
Query 3958 aaatgaagaaaaatatgagtgagtttgaaagaaaagaaaaaatatacgaagataactata 4017
| | || ||| | ||| ||||||||| | |||||||| ||||||||||||||||
Sbjct 4342 AGAAAAAATTAAACCCAACTGATTTTGAAAGACACGAAAAAATGTACGAAGATAACTATA 4283
Query 4018 taga--gaa-tacgaaaaag-----TA------------TCTAAT--------GAAACA- 4048
|||| ||| || |||||| || | |||| |||||
Sbjct 4282 TAGAAAGAACTAAGAAAAACCTTGTTAAACAAATGAGATTATAATTGCGTGACGAAACGC 4223
Query 4049 --------ATA--TGGCTTATAA------AAGGTGTGTAAGATTATGGGATTACTAGAAT 4092
||| || |||| | |||| |||||||| ||||||||| | ||
Sbjct 4222 AACGTGATATAATTGTTTTATTAGCAATTAAGGAGTGTAAGAC-ATGGGATTATTGGAGG 4164
Query 4093 GCATGCAATATCATAAACATGAACGTCGAATGATTTTATACTGGGATATAGAAACATTAG 4152
|||||| |||||| |||| ||||| ||||| |||||||| ||||| ||||
Sbjct 4163 CAATGCAAACACATAAAGGCTTACGTAAAATGACGTTATATTGGGATATTGAAACCTTAG 4104
Query 4153 CGTACAATAAAGTTAACGGACGaaaaaaaCCAACCAAATATAAAAACGTTACTTATTCTG 4212
| ||||| || | | ||| ||||| ||||||| | |||||||||||| |||| ||
Sbjct 4103 CATACAACAAGATAGAGGGAAGAAAACAACCAACTGACTATAAAAACGTTGTTTATAGTG 4044
Query 4213 TAGCAATTGGTTGGTTTAATGGTTATGAA--ATTGATGTTGAAGTATTTCCGAGTTTCGA 4270
|||| |||||||| |||| | ||| ||||| ||||| || ||||| ||| |
Sbjct 4043 TAGCTGTTGGTTGGGATAATCA--AGGAACAATTGACGTTGAGGTTTTTCCCTCTTTTAA 3986
Query 4271 ATCTTTTTATGACGCATTTTATACGTATGTGAAAAGACGTGATACAATCACAAAATCAAA 4330
|| || | | | |||| | || ||||| || | || ||||| || |||||
Sbjct 3985 CTCATTCTTTAAAACATTCTTTAAGTATGCAGAACGCAAAGACACAATAACGAAATCTCG 3926
Query 4331 AACAGATATTATCATGATTGCACATAACTGTAATAAATACGATAATCATTTTTTACTTAA 4390
||| ||| |||||||| |||||||||||||| || || ||||| ||||||||| |
Sbjct 3925 TACATCAATTGAAATGATTGCGCATAACTGTAATAAGTATGACAATCACTTTTTACTTCA 3866
Query 4391 AGACACCATGCGTTATTTTGA---TAATATTACACGCGAAAATATATATTTAAAATCTGC 4447
|| | | | || || | |||| | | | |||||| | | | ||||| ||
Sbjct 3865 CGATA---TACAACATATTTACCCTAATGTAAAAGTTGAAAATTTGTTCATGAAATCAGC 3809
Query 4448 AGAAGAAAATGAACACACATTAAAAATGAAAGAGGCTACTATTTTAGCCAAAAATCAAAA 4507
|||| ||||||| |||| | || |||||||| |||| | || ||| | | ||
Sbjct 3808 AGAAACAAATGAAAACACTGTTAATATGAAAGAAGCTAAAACAGACGCTAAAGAAGATAA 3749
Query 4508 TGTAATTTTAGAAAAACGTGTTAAATCTTCAATCAATTTAGATTTAACAATGTTTTTAAA 4567
| | |||||||||||||||||||||||||||| |||||||| | | | || ||| |
Sbjct 3748 TATTGTTTTAGAAAAACGTGTTAAATCTTCAATTAATTTAGACCTTATTTTTTTCTTACA 3689
Query 4568 TGNNNNNNNNTTTAATATTATTGATAACTTTATGAAAACCAATACATCAATTGCAACATT 4627
| ||| || |||||||||| |||||||| | ||||| ||||| |||||
Sbjct 3688 AGGTTTTAAATTTGTCGTTGTTGATAACTTCATGAAAACAACAACATCTATTGCCACATT 3629
Query 4628 AGGTAAGAAATTACTTGATGGTGGTTATTTAACAGAATCACAACTTAAAACAGATTTTAA 4687
||| || ||| | || ||||| ||| | ||| | |||||||||||||| ||| |
Sbjct 3628 AGGAAAAAAACTCAAAGACGGTGGATATCTTACATCAGACCAACTTAAAACAGACTTTCA 3569
Query 4688 TTATACGATTTTTGATAAAGATAATGATATGAATGATAGTGAAGCCTATGACTATGCTGT 4747
||| || ||||||| || | |||||| ||||| ||| |||| || |||
Sbjct 3568 ATATGATATCTTTGATATTGAAGAGGATATGGATGATGTAGAAAGTTATGCTTACGCTTA 3509
Query 4748 GAAATGTTTTGCAAAACTCACACCTGAACAACTTACATACATTCATAATGACGTGATTAT 4807
|||||||| |||||| ||| ||| | || |||||| | |||||||| |||||
Sbjct 3508 TGAATGTTTTAAAAAACTAGATAATGACCAAATGACTTACATTAACAATGACGTTATTAT 3449
Query 4808 ATTAGGTATGTGCCATATTCATTATAGTGATATATTTCCAAATTTTGACTATAACAAATT 4867
|||||| || ||||| |||||| ||||||||| ||||| ||||| ||| ||| |
Sbjct 3448 TTTAGGTCAATGTCATATACATTATTCTGATATATTCCCAAACTTTGATTATTCAAAAAT 3389
Query 4868 AACATTTTCATTGAATATTATGGAATCTTACTTGAATAATGAAATGACACGTTTTCAGTT 4927
|| ||| | || || | ||| ||| |||| ||||| | || ||||||| |
Sbjct 3388 GACGTTTAGTGTAAACATCTTAGAAAGTTATATGAACAATGATTTTACCGGTTTTCAACT 3329
Query 4928 ACTCAACCAATATCAAGATATTAAAATATCTTATACAC--ATTATCATTTCCATGATATG 4985
||| || || || | | || | ||| | |||||| ||||| |||| |||| |
Sbjct 3328 ACTTAA-TAAAAT-AGGCGATGGACGTATTTCATACACAGATTATTATTTTCATGGTCGT 3271
Query 4986 AATTTTTATGACTATATTAAATCATTCTATCGTGGTGGTTTAAATATGTATAACACCAAA 5045
|| ||||||||||||| ||| || || |||||||||||||||||||||| | |||
Sbjct 3270 AACCTTTATGACTATATCAAAGGTTTTTACAATGGTGGTTTAAATATGTATAACCCTAAA 3211
Query 5046 TACA-TAAACAAACTAATTGATGAGCCTTGTTTTTCTATTGACATCAATTCGAGTTATCC 5104
|||| | ||||| | ||| |||||||||||||||||||||| || |||||| |||||
Sbjct 3210 TACATTGGACAAA-TTATTAATGAGCCTTGTTTTTCTATTGATATAAATTCGTCATATCC 3152
Query 5105 TTATGTGATGTATCATGAAAAAATTCCAACATGGTTAT 5142
|||||| ||||||||||| ||||| ||||| | ||||
Sbjct 3151 TTATGTAATGTATCATGAGAAAATACCAACTTACTTAT 3114
Score = 370 bits (410), Expect = 1e-98
Identities = 521/721 (72%), Gaps = 13/721 (2%)
Strand=Plus/Minus
Query 5408 TGAATGTGAATACTTTCATGCACGTGATATTATTTTTCAAAACTATTTTATTAAAACACA 5467
||| |||||||| ||| ||| | ||||| || ||||||||||||||||||||||
Sbjct 2836 TGACTGTGAATATTTTGGTGCTAGGGATATCATACACGAAAACTATTTTATTAAAACACA 2777
Query 5468 AGGTAAGTTAAAAAACAAAATCAATATGACATCACCTTACGACTATCACATTACTGATGA 5527
|||||| | |||| |||||| ||||| | ||||||| |||||| || || || ||
Sbjct 2776 AGGTAAACTCAAAACCAAAATAGATATGCCTACACCTTATGACTATACAATCACAGACGA 2717
Query 5528 TATCAACGAA-CACCC-ATACTCAAATGAGGAGGTTATGTTATCTAAAGTCGTTTTAAAT 5585
|| ||| || ||| | | ||| || ||||||||||| ||||| || | |||
Sbjct 2716 GCCAAATGAAACAGTTTATAGTGA--TGAAGAAGTTATGTTATCAAAAGTTGTACTTAAT 2659
Query 5586 GGATTATATGGCATACCTGCATTACGTTCACATTTTAACTTATTCCGTTTAGATGATAAC 5645
||||||||||| || ||||| |||||||||| ||||| ||||||||| |||||| ||
Sbjct 2658 GGATTATATGGTATTCCTGCCCTACGTTCACACTTTAATTTATTCCGTAAAGATGAAGAC 2599
Query 5646 AATGAACTATACAATATCATTAACGGTTACAAAAACACTGAACGTAATATATTATTCTCT 5705
| |||| || || ||||| ||||||||||| || ||||| |||||||||||||||
Sbjct 2598 GGTTTTTTATATAACATGATTAATGGTTACAAAAATACAGAACGAAATATATTATTCTCT 2539
Query 5706 ACATTTGTCACATCACGTTCATTGTATAACTTATTGGTTCCTTTCCAATACTTAACGGAA 5765
|| ||||| || |||| ||| | ||||| || | | || || ||| ||||||| ||
Sbjct 2538 ACCTTTGTTACGTCACAATCACTTTATAATCTACTTGAGCCATTACAAGACTTAACACAA 2479
Query 5766 AGTGAAATTGACGACAATTTTATTTATTGCGATACTGATAGTTTGTATATGAAATCCGTT 5825
| |||||||||||||| ||||| || || ||||| |||||||| ||| | ||||| |
Sbjct 2478 AAAGAAATTGACGACAACTTTATATACTGTGATACAGATAGTTTATATCTTAAATCAGCG 2419
Query 5826 GTTAAA-CCCTTATTGA-ACCCCAGTTTATTCGACCCGATAGCCTTAGGTAAATGGGATA 5883
||||| ||||| | || || |||||||||||| | ||||||||||||||
Sbjct 2418 ATTAAAGATAAGATTGACGCTTCAATT--TTCGACCCGATATCGTTAGGTAAATGGGACG 2361
Query 5884 TTGAAAACGAACAGATAGATAAGATGTTTGTACTGAATCATAAGAAATATGCATA---TG 5940
|||| || || | || || || |||| |||| | || |||||||||||||| || |
Sbjct 2360 TTGAGAATGACCGTATTGAAAAAATGTATGTATTAAACCATAAGAAATATGCTTACCTTA 2301
Query 5941 AAGTGAATGGAAAGATTAAAATTGCTTCTGCTGGTATACCGAAAAACGCCTTTGATACA- 5999
|| || ||||| || | | || || ||| | ||| | |||| ||| | |||
Sbjct 2300 AACCAAACGGAAAAATCCATGTAGCAAGCGCAGGTGTGCCGTTAGACGCGTTTAACACAG 2241
Query 6000 AGCGTCGATTTTGAAACCTTTGTACGTGAACAATTCTTTGACGGTGCCATTATTGAAAAC 6059
||| | || || |||| | | | | || | ||||||| |||| | ||
Sbjct 2240 AGCAATCA-TTCGAGGACTTTATTAATAATGACTTTCATCACGGTGCTGTTATCTACAAT 2182
Query 6060 AATAAAAGTATCTATAATGAGCAAGGTACAATATCGATATATCCGTCTAAAACTGAAATT 6119
|||||||||||||||||| | |||||||| || || ||||||||||| |||| | |||
Sbjct 2181 AATAAAAGTATCTATAATAAACAAGGTACCATTTCAATATATCCGTCAGAAACACATATT 2122
Query 6120 G 6120
|
Sbjct 2121 G 2121
Score = 89.7 bits (98), Expect = 6e-14
Identities = 111/152 (73%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 7955 AATTTATCTTTAATTTGTTCTGGTACTAATACGTCCATTTCTGCACAATTTTCTACAATA 8014
||||||||||||||||||||||| | | ||| | ||||||||| ||||||||| |||
Sbjct 154 AATTTATCTTTAATTTGTTCTGGAAATGGTACATTCATTTCTGCTAAATTTTCTAATATA 95
Query 8015 GAAAGTCCCTCATTTGCAATATAATAAAATATTGTAATCATGAGTAGACCACCTTTTAAT 8074
| ||||| | ||||| ||||| || || ||| || | || |||| |||||
Sbjct 94 CTTAAACCCTCTGTAGCAATGTAATAGAACATGATAACTATTACTAATGCACCGTTTAAG 35
Query 8075 TGTAAAATCTGGTCAATGATGTTTGCTAAAAT 8106
| ||| || | |||||| || || | || |||
Sbjct 34 TTTAATATGTTGTCAATAATATTAGATATAAT 3
>seq2572
Length=8270
Score = 839 bits (930), Expect = 0.0
Identities = 1502/2167 (69%), Gaps = 66/2167 (3%)
Strand=Plus/Minus
Query 14838 CAAATGCTTCAACTGTTTGTCTGTTGATTTCTCTATCTAAAAAATGAATCGTAAATGATT 14897
|||| | ||| || |||||||| | || ||||||||||| ||| | | ||||||||
Sbjct 2141 CAAAGGATTCGACGGTTTGTCTACTAATCTCTCTATCTAAGAAACGTGTAACAAATGATT 2082
Query 14898 TTTTAAAAA----GTAAATCTGATAATTCATCTTTCAATGAAAAACCTTTAAATACTTTT 14953
||||||| || ||| || ||| ||| | || ||| |||||||| | ||
Sbjct 2081 GTTTAAAATAACGGTCAATATG----TTCGTCTGTAAAGTGAAATCCTTTAAAAAAGGTT 2026
Query 14954 TCATTAACGATAGCTAAAACGTCTTTGTCGAACTTCAGCATTTTTTGCATGAATTGAAAT 15013
|| | ||||| | ||| || | ||| || || || |||||| ||||||||| |
Sbjct 2025 TCGTCTACGATTTTTTTAACATCATCGTCAAAACGCATCACTTTTTGAATGAATTGATAA 1966
Query 15014 TCATCATCATAAAACGTTAATTTATTATCATTTACAAATTCATTGAAACCTTTTTTAATC 15073
||| | || || ||||||| | ||| ||||||||||| || |||||| ||
Sbjct 1965 TCAAAGTTATCAATGGTTAATTGTCCGTTATTAACAAATTCATTAAATCCTTTTCTATCT 1906
Query 15074 AATTCTGATTTAATGAAATCGTATAAAGTCATTGTGTATCTAGCCATTTATATCAC-TGC 15132
||||| | ||||| || |||| || |||| |||||||||| || || ||| | |
Sbjct 1905 AATTCACTCTCAATGATTTCAAATAAGGTTGTTGTATATCTAGCCACTTGTACCACCTCC 1846
Query 15133 TT--TCATCTTTAAAAAGTGTGTCTACCATTGATATTTTAGACGTTGTTTCATCATCGTA 15190
| | || || | ||| | | || || | | || |||| ||||||||| ||
Sbjct 1845 GTAGTTGTCGGTAGCCA-TGTTTTGAATATCGACTTGT--GATGTTGCTTCATCATCATA 1789
Query 15191 ATACGGTT-TAATATCTAAACCATAACGCTTTGATAAAAACGTA-ATTGGTTCACGACCT 15248
||| || | |||| ||||| || |||| || | | || | | || ||||||||||
Sbjct 1788 ATAAGGGTGTAAT-TCTAACCCGAAACG-TTGGTTTAACATTTCTATACTTTCACGACCT 1731
Query 15249 TTTAAATAGATATTACTGTTTGATGTGGTAAATCCACGATTACTTTTTGCCTCTTCGTCT 15308
||||||| || || ||| || || |||||| ||| ||||||||||| ||| ||
Sbjct 1730 CTTAAATAAATGTTTGAGTTAGACGTTGTAAATGAACGGTTACTTTTTGCTTCTGTATCA 1671
Query 15309 GAAACACCGCTTTCTTTATCAACGGCTAATGAATTAATGCCTAAATAGTTACTTAATTCA 15368
|||||||||||||||||||| ||||| || |||| ||||| ||||| || ||||
Sbjct 1670 CTCACACCGCTTTCTTTATCAACAGCTAAAGAGTTAACACCTAAGAAGTTAGATAGTTCA 1611
Query 15369 CTAATTTTGTTTTGATATTCCCGTTTCATTTCAGTTAATGCTGGGATTACGCTATTACTT 15428
|| ||||||||||||||||| |||||||||||| | ||| | | ||| || ||||
Sbjct 1610 CTTATTTTGTTTTGATATTCTCGTTTCATTTCAACGAGTGCATTGTTAACGTAATCACTT 1551
Query 15429 GTTAAATCAATGATATCGTCATCTGCATTAAACATAGGTGACAT--TTTAACAAATGGTG 15486
| ||| || || || || || || |||| ||| || || | ||||| || ||||
Sbjct 1550 GCTAAGTCTATAATGTCCTCTTCAGCATCAAA--TAATCCACTTACTTTAATGAAAGGTG 1493
Query 15487 CACCGTTATAT-ATTTCGGACACAAGTTGATTGATTGACTCGTCATTAATTTCTGATTTA 15545
|| ||| | | || | | | |||||| |||| || || |||| ||| |||||
Sbjct 1492 AGCCATTAAAACAATTGAGTGATGAATTGATTAATTGTTTCATCGTTAACTTCCGATTTG 1433
Query 15546 AATATCTTGCTAAATTTTGCTTGCATGATTAAAGAAAAGCGAGATAAAGCAACTTCTGCT 15605
||||| || |||||| | |||||| || | ||||| ||| |||| | |||||||
Sbjct 1432 AATATTTTAGCAAATTTGGATTGCATAATAAGTGAAAAACGACTTAAAATGATTTCTGCT 1373
Query 15606 AATTCATCAGTATAATGTTCTATAATTTCTATA-TCACTATTATATTGA-ATTGGTTTAT 15663
||||||||| ||| ||| |||||| | ||| ||| |||| || || | ||||||||
Sbjct 1372 AATTCATCACAATAGTGTGAAATAATTGC-ATAGTCATTATT-TAGTGTTACTGGTTTAT 1315
Query 15664 TTTGCATGACAACAAAGTTACCACTCATACAGTTATCATATAGCTTATGAATTTGTAGAC 15723
|| ||| |||| ||| | ||| |||| || ||||| | || |||| || |
Sbjct 1314 TTCTCATAACAATAAAATCACCTGATTTACAATTGTCATAA---TATTGTATTTCTAAAG 1258
Query 15724 AATCATCAGGTATTAAATAGTCAGGTACAATAAAATATATATCTTCTTTAGTTAATCGTT 15783
| |||||| ||| || | ||| | | ||||| ||| |||| | |||||||
Sbjct 1257 CGTAATCAGGGCGTAAGTATTTAGGAATAGTAAAACGTATGTCTTTCTCGTTTAATCGGC 1198
Query 15784 TTTGAAATTGGAAATTAAAGTTTGATGAAAAATTTGGTGCT-TGATTAAAGTAAGTGTTA 15842
|| ||| || |||||||| | ||||| | || | ||| | | | | ||
Sbjct 1197 GTTCAAAAGCAAAGTTAAAGTTATTT-AAAAAGTCACCACTATTTTTATAATGATTATTT 1139
Query 15843 TTTACATAACCAAGAATCATAATTTGCTTATTTCTAGCTTCACCAACAACTACATTAATG 15902
| || |||||| || ||||||||||| | ||||||||| | |||||||||||| | |
Sbjct 1138 TCTATATAACCTAGTATCATAATTTGGTCATTTCTAGCCTTACCAACAACTACCTGATAA 1079
Query 15903 TTTTGTCTTAAAGCTGATTCTAACTGAATAAAATCTATACCAACCGTATCACGATTGGTA 15962
||| | ||| || | |||||| || | |||||||||| || || ||| |||
Sbjct 1078 CCTTGACGTAATGCAGTTTCTAATTGTAAAAAATCTATAGACACGCTACGTTTATTTGTA 1019
Query 15963 TAGTTGATTAGTAGCGGTAAAAATTCCAAATAACGATTAAACATAAGACGTTTAAATCTG 16022
||||| || ||||| |||| ||||||||||||||||||||| ||||| | |||||
Sbjct 1018 TAGTTAATCAGTAGGGGTAGAAATTCCAAATAACGATTAAAAATAAGCCTACGAAATCGA 959
Query 16023 TTGCGATGTTCAACAACTCTTTTGCTGATTTCCTTTGATAACTCAACGTTTAAAC----- 16077
|| | |||||| | ||| | ||| || |||| |||||||| |||| |||
Sbjct 958 TTTCTATGTTCGATAACACGCAGGCTTATGTCCTCAGATAACTCT--GTTTCAACGCCAA 901
Query 16078 --------CTCTTTTATCGTTGTTCATAT------TTTACGCTCCTTTTATTCTTGTAAT 16123
|| ||| | || | || | || |||||||||| | || ||
Sbjct 900 CATGTTCACTATTTGAATGTGATAGATTTGTCATGTTAACGCTCCTTTAAA----GTTAT 845
Query 16124 TCTTCCTCTGGTTTT--GGATTTACATCTTGGTC---AGTAATTAAAATTTTATTAAAGA 16178
||||| ||| | || | | | || | || ||| ||||||||||| || ||||
Sbjct 844 TCTTCTG--GGTCCTCAGGTTGTTCCTCAGGCTCTGAAGTGATTAAAATTTTGTTGAAGA 787
Query 16179 ATGGACTAATGGCTTTAAATGAATAGTAATGAATCCAGTGTGTAACTTCATCAAATTCAG 16238
|||| || | ||| || || || || ||||| |||||||||||||||||||||
Sbjct 786 ATGGTGAAACAGATTTGAAGCTGTAATAGTGTATCCAATGTGTAACTTCATCAAATTCAC 727
Query 16239 GGTTATGGAATGGTGGTTTTAACATACCTTTTGTGTAACGTTTATATTTAATTGAATTAA 16298
||||| ||||||| ||| | |||||| ||||| | |||||| ||||| | | ||||
Sbjct 726 CGTTATAGAATGGTTTTTTAAGCATACCGTTTGTATTACGTTTGTATTTCAAAGCGTTAA 667
Query 16299 TATCCAAAATAAACGCATATAAATCTGATTTTGGTTTAATTTCTTCAACGTTGCCAGTAA 16358
|||| ||||| || || ||| || | ||||||| ||| || || ||| ||
Sbjct 666 TATCGAAAATGAAAGCGAATAGGTCACTATCAGGTTTAACCTCTGTTACATTACCAACAA 607
Query 16359 ACTCTTTAAGTTTAGATACATCATAAGTAAATACAGCACCAACTGGAATTGTATCTCCTA 16418
| || | ||| || | ||| ||||||| | ||| | || || |||| || |
Sbjct 606 ATTCAGTTTGTTGTGAAATGTCAAAAGTAAAAGTTGTACCCTCAGGGATAATATCACCAA 547
Query 16419 ATTGTGATTGATAATCTCCATACGCACGTAAAAAGTCAATTGAATCTTGGTTTTGTAACT 16478
||| | ||||||||| || | ||||||| || |||| || | | || |||
Sbjct 546 TTTGAGCTTGATAATCACCGAAACCACGTAAGTAGGTGATTGTGTCATTTTCTTCTAATG 487
Query 16479 TAAATTCTTTTGTTACTTTAAACACGCCACCTAAGTCGTCAAAACTAATAACGTGATCTG 16538
| | || | ||| ||| |||| || |||||||||||||| ||||| || || ||||
Sbjct 486 TTACATCATCAGTTGTTTTGTACACACCGCCTAAGTCGTCAAAGCTAATTACATGGTCTG 427
Query 16539 TGAAATCAATGCCTGCAATCTGGAATGTGTTTGCAATCTTAGTATCTAA-AAGATAAGAT 16597
| || |||||||||| ||||||||||| ||||| || |||||||| |||| | |||
Sbjct 426 TAAAGTCAATGCCTGATGCTTGGAATGTGTTAGCAATTTTTGTATCTAATAAGA-ATGAT 368
Query 16598 TTTAATGAATCTGTTGTTAAAATCACAATATCTTTTAATTTTGATACAGTTGTATATTGT 16657
|| | ||||||||||||||| ||||||| ||||| || || ||||| || |
Sbjct 367 TTAATACTATCTGTTGTTAAAATAGCAATATCAGACAATTTAGAAACTGTTGTGTAACGA 308
Query 16658 CCAATTGCACCACCTGATGCACGATGTACTTCATTATATTTAGCACTGTTGTTTTGTAAG 16717
||||||| |||||||| ||| || ||||||| ||||| ||||||| ||||| | |
Sbjct 307 CCAATTGACCCACCTGAAGCAGTATTAGCTTCATTGTATTTGTCACTGTTATTTTGCATG 248
Query 16718 TTTAGGATTGCTTCAAAAACTTTGCTTGCTAAATCTTCTTTTGATGTTGCTTTACGTACA 16777
||||| | |||||||| ||||| |||||||||||||||| |||||| || | ||| | |
Sbjct 247 TTTAGTACAGCTTCAAATACTTTACTTGCTAAATCTTCTTGTGATGTAGCGTAACGAATA 188
Query 16778 TTTGTTTCGGATAATTGATTCAATGAGTAATCAACTAACATTGCACGCATTTCTTTTTCT 16837
|||| || |||||||| || | || || ||||| | ||| ||||| ||||||||||||
Sbjct 187 TTTGAGTCAGATAATTGGTTAATTGCATAGTCAACAACCATGGCACGGATTTCTTTTTCT 128
Query 16838 TCTAATACATTAATATCAGAAATTTTCTTTTTGTATACACCTAAAGCGTAATTAGTTGCG 16897
||| ||| |||||||||||||| || || || |||| ||| || || || || |||
Sbjct 127 TCTTCTACGTTAATATCAGAAATCTTTTTCTTCAATACTGCTAGGGCATAGTTTGTAGCG 68
Query 16898 TCTGCTAATGTTTGGAAATTGAAACGTGTATCATTGTTGTTTAATGTGAATTTTTGTTTC 16957
|| |||| || ||| || ||||||| ||| || || |||||||| |||||||||||
Sbjct 67 TCACCTAAGTCTTTGAAGTTAAAACGTGCATCGTTATTATTTAATGTAAATTTTTGTTTT 8
Query 16958 TTCACAA 16964
|| ||||
Sbjct 7 TTAACAA 1
Score = 702 bits (778), Expect = 0.0
Identities = 1054/1479 (71%), Gaps = 21/1479 (1%)
Strand=Plus/Minus
Query 8589 GGTACACTAATTTTCATCGTTAAACCGTTAATGCTATTCGCAATTTGGAATGCGTTGCCC 8648
|||| || |||||||| |||||||||||||| ||||||||||||||||| || || |||
Sbjct 8188 GGTATACCGATTTTCATTGTTAAACCGTTAATACTATTCGCAATTTGGAAAGCATTACCC 8129
Query 8649 ATTTCTGATTCAGTTACAGAAGGTGGTTGTAAGGCTAAATCTTTATATTCAGCTTGTTGT 8708
|||| | |||| || ||||||||||| |||| ||||||||||| ||||||||
Sbjct 8128 ATTTGACTTGAAGTTGTTGACGGTGGTTGTAAAGCTAGGTCTTTATATTCTGCTTGTTGG 8069
Query 8709 TGTTTGTAGAAATTATATTCTTCATTAAACTTACCAAATAAAGCAGTTGGACTTAAATTA 8768
| || || | | ||||| |||||||| |||| |||||| || || || | |||
Sbjct 8068 TTTTGATAATATGTGTATTCATCATTAAATTTACTAAATAATTGTGTCGGGCTGATATTG 8009
Query 8769 CTTGCTACACTCACAGCGTCATAAAAGCGTGATTTCGGGTCGCTACCATTTAATACATTA 8828
||| | ||| | | ||||| || ||||| |||| ||| | | |||
Sbjct 8008 GATGCAATACTTGCCACATCATAGAATTTAGATTTAATGTCGTCACCTGTAGCAATATTT 7949
Query 8829 TCAATACGATTTGTAATTAATTGACTTTCTGCAtttttttGTCGGTTGGCTTGTTGTGAT 8888
| ||||||||| ||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 7948 TGCGCACGATTTGTTATTAATTGACTTTCTGCATTTTTCACACGGTTAGCTTGTTGTGAT 7889
Query 8889 TGTCCTAAGATACCATTATTGATTAATATTGGTACTTGTGCAAAACTATTAAATGTTATA 8948
|||||||| |||||||||| ||||| | |||||||| ||||| |||| |||||| ||
Sbjct 7888 TGTCCTAATATACCATTATCAATTAACACTGGTACTTCAGCAAAGCTATCAAATGTAATT 7829
Query 8949 TTTGTATTTAAGAATGAACCCGTATCAATCAATATTTCTTTATTTTTAGCGAGTATTGGT 9008
|| ||||||||||| || || || |||||||| || ||| | | || |||
Sbjct 7828 GCAGTGTTTAAGAATGACCCTGTGTCTATCAATATCTCACCATTGGTTGATTTAATGGGT 7769
Query 9009 CTGTCGTTTTCAGCACTGTTATAATCTACTGGATATACTCGAACTTCATTATGATAACCA 9068
|| |||| | ||||||| || || ||||| | || ||||||||||||| ||||
Sbjct 7768 TGTTCTGCTTCACCTTTGTTATAGTCAACGGGATAAATTCTAACTTCATTATGAAAACCG 7709
Query 9069 ATAATTGATTTTGTACGTAACTTAACACCAGTTTTTTGTGAAATCTTACCAGCGTCGAGT 9128
||||||||||| || | ||||| ||||| |||| ||| ||||| || ||||| | |
Sbjct 7708 ATAATTGATTTCGTTCTAAACTTCACACCTGTTTCGGGTGTTATCTTCCCTGCGTCTAAT 7649
Query 9129 AACATCGTATTTCCATTCCAGTCATAAAATTCAATTGTCATATACTCATTACGTATCATA 9188
||||| | | || ||||| ||||| ||| ||||| | ||| |||||||| | | |
Sbjct 7648 AACATAGCGTCACCGTTCCATGAATAAACTTCTATTGTAAAATATTCATTACGGACTAAA 7589
Query 9189 TGTTTAAATTCATCTTTTTTAGATAACATCATCTCTTGAAGCTTTG-AGAAACTTAATGA 9247
|| | |||| || || |||| | | || || || | ||||| |
Sbjct 7588 TGACGTAGTTCAGGTTGATT-GATACCTGCTAAATTTAAAAATTCGTTAAAACTCATATT 7530
Query 9248 TAAATCTTTTAGACTCCATTCttttgatttaccaccctgttttaatgtttttaatcctgt 9307
||||| ||| |||| ||| || ||| ||||||||| || |||||| |
Sbjct 7529 TAAATTAGGTAGTGACCATGTTTTAGAACGGCCATTACTTTTTAATGTGTTCAATCCTTT 7470
Query 9308 aattttttcactggttttaaCGTCCTCTAAGTCTTTTGTATTAATAAAGTCTTTAGGTAA 9367
||| | |||| |||||| || |||| || | ||| |||||| | || |||||
Sbjct 7469 AATATCTTCATCGGTTTTGACACTTACTAAATCACTACTATCAATAAACTTTTCAGGTAT 7410
Query 9368 CATTTGAACCTTTTGAAAGTTTTGCGTAATCCATGGATAGGCACTCATTTTATCCATAAA 9427
|||||| | ||||| |||||||| ||||||||||| || |||||||||||||||||
Sbjct 7409 CATTTGTATTTTTTGGAAGTTTTGAGTAATCCATGGGTATTTGCTCATTTTATCCATAAA 7350
Query 9428 GTTAATAAAGTCACCATATTCCATAACGTATAAGTTGACTGGTGATGTGATATTGTCATA 9487
|||| ||| | || | ||| | |||||| || ||||| || |||| ||||||
Sbjct 7349 ATTAACAAAATTTGAATGTGACATGATGTATAAATTAACTGGACTCGTCATATAGTCATA 7290
Query 9488 AATCGTACCTTTTGACGTATCTAAGTTTGGCTCTTTTTTAGTACCAAATTTCTTTGATAA 9547
| | |||||||| ||||||| || |||||||||||| |||| ||||| || |||||
Sbjct 7289 AGTTAATCCTTTTGAACTATCTAAATTAGGCTCTTTTTTACTACCGAATTTTTTAGATAA 7230
Query 9548 ATCAGCGCTTGACTGGAATAATAC-TAAATTTTCCAAATATTGTTGCATTTGGTTATAAA 9606
||||| ||||| || || | || || | || | || |||||| | | |||
Sbjct 7229 GTCAGCACTTGATTGAAACATAACATAGTTGTTACCAA-ATTGTTCTAAGTAGTTTCTTG 7171
Query 9607 CATAGTTTTTATTTGATACTTTTAACACATCATCATTATTACGTAACATTGGTAACATAT 9666
||||| |||||||| |||| || |||||||||||||||||||| |||||||| |
Sbjct 7170 AATAGTATTTATTTGTCGCTTTCAATACATCATCATTATTACGTAAATAAGGTAACATGT 7111
Query 9667 AGTTATACGTGCG-TTTTGATAAATGTTGACGTTCAATA-TTGACGTTTGAGAGTTGCTC 9724
| | ||| || | ||||| ||||||||||||||| | | || ||||| |||
Sbjct 7110 ATTCATA-TTGAGATTTTGGTAAATGTTGACGTTCCACACGTGCGTTTTGAATGTT-AGA 7053
Query 9725 TAATACATTCCCTTGTGTATACGTCATAATGGTATCAATGACAAAATATATTTTAACCAC 9784
||| ||||| ||||||||||| ||||| || || ||||| || ||| |||| || ||
Sbjct 7052 TAAAACATTACCTTGTGTATAAGTCATGATTGTGTCAATAACCAAAGTCATTTGAATTAC 6993
Query 9785 AACGTCATTCACGTATTCGATTTGGTTTACAAAAGCGTAATATCTTCTATCCTCAAAATC 9844
| || || | ||||| || || |||||||||||||| | ||||| |||||| |
Sbjct 6992 ATTATCGTTAATATATTCAATCGCATTAACAAAAGCGTAATAACGTCTATTCTCAAACCC 6933
Query 9845 TGATAAAAACGTCATGTAGTTAATACCTTGTGCGTCATGCCACTGCATAT---CAACATT 9901
|||| ||||| |||||||||||||| || ||| ||| | ||| | || ||
Sbjct 6932 TGATTTGAACGTACAATAGTTAATACCTTGAGCTTCACTCCAATTCATTTGTGGTACTTT 6873
Query 9902 GATTTCCAT---TCTATCACGTATAAAATTATACGGTTGTTTTGAATAGTCTAA-CGATT 9957
| | || | || |||||||||||| | || |||| || |||| | ||
Sbjct 6872 AA---CAATGGAGCGGTCGCGTATAAAATTAAATGGGATTTTTTCGTA-ACTAATTGCTT 6817
Query 9958 TAAAATGACGACCATTTAAAAAATAATCATCACGTTCTTTATTACTATTAAAATGAATCG 10017
||||||| | ||||||| |||| ||||||||||||| |||||| ||||||| ||||
Sbjct 6816 TAAAATGTCCACCATTT-AAAAGTAATCATCACGTTGCGCATTACTGCTAAAATGTATCG 6758
Query 10018 TGTTTTGATAGTCTG-TAAACGGTGTGTTATAGAAAAAC 10055
|||||||||| |||| |||| ||||||| ||||||||||
Sbjct 6757 TGTTTTGATAATCTGTTAAAAGGTGTGTCATAGAAAAAC 6719
>seq2740
Length=4841
Score = 125 bits (138), Expect = 8e-25
Identities = 183/255 (72%), Gaps = 4/255 (2%)
Strand=Plus/Plus
Query 7935 TATCATTTTTAATGACTCTTAATTTATCTTTAATTTGTTCTGGTACTAATACGTCCATTT 7994
||||| ||||||| ||| | ||| || ||||| | || |||||||| ||||||
Sbjct 1249 TATCACTTTTAATAACTTGAAGTTTTTCAGCAATTTCCTTAGGAACTAATACACCCATTT 1308
Query 7995 CTGCACAATTTTCTACAATAGAAAGTCCCTCATTTGCAATATAATAAAATATTGTAATCA 8054
| || |||||||||||||| | ||| |||||||| | ||||||| || ||||||||
Sbjct 1309 CAGCGCAATTTTCTACAATGCTTAATCCTTCATTTGCTAAGTAATAAAGTAATGTAATCA 1368
Query 8055 TGAGTAGACCACCTTTTAATTGTAAAATCTGGTCAATGATGTTTGCTAAAATGATAATAC 8114
| | || ||||| |||| | | || || || || || || |||||||| |||||||
Sbjct 1369 TTAACAGTCCACCATTTAGCTCAAGTATTTGATCTATAATATTAGCTAAAATAATAATAC 1428
Query 8115 AGAATATCAATAATTTTTTAGAAAATCCTCTCATTGAtttttttGACCATAAGTTATTAT 8174
| ||||||| | |||| | | ||| || ||| ||||| ||||| | |||
Sbjct 1429 A-AATATCATCATTTTTCTCGCAAA-CCAAACATGGATTTACGACTCCATA--TGATTTG 1484
Query 8175 TTTTAATTGCTTTTG 8189
|||||| ||||||||
Sbjct 1485 TTTTAAATGCTTTTG 1499
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 58191897757250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |