Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_004814.1 Length=16687 Score E Sequences producing significant alignments: (Bits) Value seq2572 86.0 7e-13 >seq2572 Length=8270 Score = 86.0 bits (94), Expect = 7e-13 Identities = 110/148 (74%), Gaps = 14/148 (9%) Strand=Plus/Minus Query 14424 GTAGTAGTGAATCCAATGTGTTACTTCGTCAAACTCACCGTTATAGAATGGTGCTTTCAA 14483 ||| ||||| ||||||||||| ||||| ||||| |||||||||||||||||| ||| | Sbjct 764 GTAATAGTGTATCCAATGTGTAACTTCATCAAATTCACCGTTATAGAATGGTTTTTTAAG 705 Query 14484 CAT---GTTACGTGTATAACGTTTGTAACGAATTGAA--CGT--ACATCGAAAATTGCTA 14536 ||| ||| ||||| |||||||| | || || ||| | ||||||||| Sbjct 704 CATACCGTT---TGTATTACGTTTGT----ATTTCAAAGCGTTAATATCGAAAATGAAAG 652 Query 14537 CAAATTCATCACTGTCAGGTTTAACTTC 14564 | ||| ||||| ||||||||||| || Sbjct 651 CGAATAGGTCACTATCAGGTTTAACCTC 624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 53265261003750