Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq276 178 3e-39
seq328 174 4e-38
seq2302 154 3e-32
seq35 131 4e-25
seq1042 113 1e-19
seq4 105 2e-17
seq231 104 5e-17
seq1265 96.9 8e-15
>seq276
Length=376631
Score = 178 bits (196), Expect = 3e-39
Identities = 178/231 (77%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| |||| || | ||||||| || | ||| ||||||||||||||||||||||||
Sbjct 241197 ATTCCACCTCGAAGACGGAGTACTAAGTGAAGTGTTGATTCTTTCTGAATATTATAGTCA 241138
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|||| || | || ||||| | ||| ||||| |||||||||| | ||||||||| ||
Sbjct 241137 GATAACGTACGGCCATCTTCCAATTGCTTTCCGGCAAAAATTAATCGCTGTTGATCTGGT 241078
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| ||||||||||| || ||||| || ||||| |||||||| | | ||| | ||||
Sbjct 241077 GGGATTCCTTCTTTGTCTTGAATTTTCGCTTTCACATTTTCAATAGAATCTGACGATTCT 241018
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| || | || || || || |||||||| ||||| ||||| || ||||||
Sbjct 241017 ACTTCCAAAGTGATGGTTTTGCCAGTAAGGGTTTTCACAAAGATTTGCATT 240967
Score = 174 bits (192), Expect = 4e-38
Identities = 177/231 (77%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| |||| || | ||||||| || | ||| |||||||||||||||||||||||
Sbjct 241653 ATTCCACCTCGAAGACGGAGTACTAAGTGAAGTGTTGATTCTTTCTGAATATTATAGTCG 241594
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|||| ||| | || ||||| | ||| ||||| |||||||||| | ||||||||| ||
Sbjct 241593 GATAAAGTACGGCCATCTTCCAATTGCTTTCCGGCAAAAATTAATCGCTGTTGATCTGGT 241534
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || |||||||| || ||||| || ||||| |||||||| | | || || ||||
Sbjct 241533 GGGATCCCTTCTTTGTCTTGAATTTTAGCTTTCACATTTTCAATAGAGTCTGAAGATTCT 241474
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| || | || || || || |||||||| ||||| ||||| || ||||||
Sbjct 241473 ACTTCCAAAGTGATGGTTTTGCCAGTAAGGGTTTTCACAAAGATTTGCATT 241423
Score = 170 bits (188), Expect = 4e-37
Identities = 178/234 (76%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| |||| || | ||||||| || | ||| |||||||||||||||||||||||
Sbjct 240741 ATTCCACCTCGAAGACGGAGTACTAAGTGAAGTGTTGATTCTTTCTGAATATTATAGTCG 240682
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|||| || | || ||||| | ||| ||||| |||||||||| | ||||||||| ||
Sbjct 240681 GATAACGTACGGCCATCTTCCAATTGCTTTCCGGCAAAAATTAATCGCTGTTGATCTGGT 240622
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| ||||||||||| || ||||| || ||||| |||||||| | | || | ||||
Sbjct 240621 GGGATTCCTTCTTTGTCTTGAATTTTAGCTTTCACATTTTCAATAGAGTCTGATGATTCT 240562
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563
|| || | || || || || |||||||| ||||| ||||| || ||||| |||
Sbjct 240561 ACTTCCAAAGTTATGGTTTTTCCAGTAAGAGTTTTCACAAAGATTTGCATCTTG 240508
Score = 168 bits (186), Expect = 2e-36
Identities = 176/231 (76%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| |||| || | ||||||| || | ||| |||||||||||||||||||||||
Sbjct 240969 ATTCCACCTCGAAGACGGAGTACTAAGTGAAGTGTTGATTCTTTCTGAATATTATAGTCG 240910
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|||| || | || ||||| | ||| ||||| |||||||||| | ||||||||| ||
Sbjct 240909 GATAACGTACGGCCATCTTCCAATTGCTTTCCGGCAAAAATTAATCGCTGTTGATCTGGT 240850
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| ||||||||||| || ||||| || ||||| |||||||| | | || | ||||
Sbjct 240849 GGGATTCCTTCTTTGTCTTGAATTTTAGCTTTCACATTTTCAATAGAGTCTGACGATTCT 240790
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| || | || || || || |||||||| ||||| ||||| || ||||||
Sbjct 240789 ACTTCCAAAGTGATGGTTTTGCCAGTAAGGGTTTTCACAAAGATTTGCATT 240739
Score = 165 bits (182), Expect = 2e-35
Identities = 175/231 (76%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| |||| || | ||||||| || | ||| |||||||||||||||||||||||
Sbjct 241425 ATTCCACCTCGAAGACGGAGTACTAAGTGAAGTGTTGATTCTTTCTGAATATTATAGTCG 241366
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|||| || | || ||||| | ||| ||||| |||||||||| | ||||||||| ||
Sbjct 241365 GATAACGTACGGCCATCTTCCAATTGCTTTCCGGCAAAAATTAATCGCTGTTGATCTGGT 241306
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || |||||||| || ||||| || ||||| |||||||| | | || | ||||
Sbjct 241305 GGGATCCCTTCTTTGTCTTGAATTTTAGCTTTCACATTTTCAATAGAGTCTGACGATTCT 241246
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| || | || || || || |||||||| ||||| ||||| || ||||||
Sbjct 241245 ACTTCCAAAGTGATGGTTTTGCCAGTAAGGGTTTTCACAAAGATTTGCATT 241195
>seq328
Length=376668
Score = 174 bits (192), Expect = 4e-38
Identities = 220/300 (73%), Gaps = 2/300 (1%)
Strand=Plus/Plus
Query 238590 CTATGGAATTCCGCCCAGATACAAATGGTAAGACTAGGCAAAATGCATAGTTTCTTACGA 238649
|| |||||||| || || ||||| |||||| |||||| ||||| ||||| ||||
Sbjct 43975 CTGTGGAATTCTGCACAAATACAGTTGGTAAAGGAAGGCAAGATGCACGGTTTCCTACGC 44034
Query 238650 ATGTATTGGGCTAAAAAGATACTTGAATGGACTAGAT-CTCCAAAGGAAGCTCTTAGATA 238708
||||| ||||| ||||||||||| ||||||||| ||| ||||| | ||| || | |
Sbjct 44035 ATGTACTGGGCAAAAAAGATACTAGAATGGACT-GATACTCCAGATAGAGCACTAGCAGA 44093
Query 238709 TAGTATTTATCTGAACGATAAATACGAACTCGACGGTACGGATCCTAACGGATACGTAGG 238768
| |||||||| || || ||||| | || ||| || || | || | || ||
Sbjct 44094 TGCAATTTATCTTAATGACAAATATAGCATGGATGGTCGTGACCCGAGTGGTTTTGTTGG 44153
Query 238769 TTGTATGTGGTCAATATGTGGATTACACGATAGGGCATGGTCTGAGAGACCTATATTTGG 238828
|||||||||||||||||||| | || ||| || |||| || ||| || |||||
Sbjct 44154 ATGTATGTGGTCAATATGTGGTATTCATGATCAGGGATGGAAAGAAAGAGAAATTTTTGG 44213
Query 238829 AAAAGTTAGATACATGAATTATGAAGGAACTAAGAAAAAATTTGATGTAAATGCTTTTAT 238888
|||| |||| || ||||| |||| |||| ||||| ||| ||||| |||||||||||||
Sbjct 44214 AAAAATTAGGTATATGAACTATGCAGGATGTAAGAGAAAGTTTGACATAAATGCTTTTAT 44273
Score = 84.2 bits (92), Expect = 5e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 237973 AAGTGGTATTTATACAAGTTGACGCTCACAATATTGTACCTTGTTGGGAAGCATCTCATA 238032
||||| | ||||||| || || || || ||||||||||||||||||| || ||| | |
Sbjct 43122 AAGTGCCAGTTATACAGGTAGATGCCCATAATATTGTACCTTGTTGGGTGGCTTCTGACA 43181
Query 238033 AACAAGAATACGGTGCTAGAACATTACGTAAGAAAATAAAT 238073
|||||||||| || |||||| |||| || ||||| |||
Sbjct 43182 AACAAGAATATTCCGCAAGAACAATACGAAACAAAATCAAT 43222
>seq2302
Length=121279
Score = 154 bits (170), Expect = 3e-32
Identities = 153/198 (77%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 104362 TGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCC 104421
|||||||||||| ||||| || ||||| || || || | |||||||| ||||| |||||
Sbjct 54133 TGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGGGTACGTCCGTCTTCAAGTTGCTTTCC 54192
Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481
||||| || | | ||||| || || || || |||||||| || || ||||| |||||
Sbjct 54193 GGCAAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTGTCTTGGATCTTGGCTTT 54252
Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
||||||||| | || ||| | ||| ||||| | |||||| ||||| ||||| || ||
Sbjct 54253 TACATTTTCAATGGAATCAGATGATTCCACCTCCAATGTAATGGTCTTTCCAGTGAGGGT 54312
Query 104542 TTTTACAAATATCTGCAT 104559
|||||||| || |||||
Sbjct 54313 CTTTACAAAGATTTGCAT 54330
Score = 150 bits (166), Expect = 4e-31
Identities = 154/201 (77%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|||||||||||||| || || |||||||| || || | |||||||| ||||| |||||
Sbjct 54362 GTAGATTCTTTCTGGATGTTGTAGTCAGAAAGTGTGCGTCCGTCTTCAAGTTGCTTTCCG 54421
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || | | ||||| ||||| || || |||||||| || || ||||| ||||||
Sbjct 54422 GCAAAGATCAAACGTTGTTGGTCAGGTGGAATACCTTCTTTGTCTTGGATCTTAGCTTTT 54481
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|||||||| | || ||| | || || || | || ||||| |||||||| | |||
Sbjct 54482 ACATTTTCAATGGAATCTGATGACTCAACTTCCAAAGTGATAGTTTTACCAGTCAAAGTT 54541
Query 104543 TTTACAAATATCTGCATTTTG 104563
|| ||||| |||||||| |||
Sbjct 54542 TTGACAAAGATCTGCATGTTG 54562
Score = 140 bits (154), Expect = 7e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||||||||| ||||| ||||||||||| || || | |||||||| ||||| |||||
Sbjct 52766 GTAGATTCTTTTTGAATGTTATAGTCAGAAAGTGTGCGTCCGTCTTCAAGTTGCTTTCCG 52825
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || | | ||||| || || || || ||||| || || || ||||| || ||
Sbjct 52826 GCAAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCCTTGTCTTGGATCTTAGCCTTA 52885
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|||||||| | || ||| | ||| ||||| | |||||| ||||| ||||| || ||
Sbjct 52886 ACATTTTCAATGGAATCAGATGATTCCACCTCCAATGTAATGGTCTTTCCAGTGAGGGTC 52945
Query 104543 TTTACAAATATCTGCAT 104559
|| || || || |||||
Sbjct 52946 TTAACGAAGATTTGCAT 52962
Score = 132 bits (146), Expect = 1e-25
Identities = 148/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 104362 TGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCC 104421
|||||||||||| ||||| || ||||| || || || | |||||||| ||||| |||||
Sbjct 52993 TGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGGGTACGTCCGTCTTCAAGTTGCTTTCC 53052
Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481
|||||| || | | || || || || || || ||||| || || || ||||| || ||
Sbjct 53053 AGCAAAGATCAAACGTTGCTGGTCTGGTGGGATACCTTCCTTGTCTTGGATCTTGGCCTT 53112
Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|||||||| | || ||| | ||| ||||| | |||||| ||||| ||||| || ||
Sbjct 53113 AACATTTTCAATGGAATCAGATGATTCCACCTCCAATGTAATGGTCTTTCCAGTGAGGGT 53172
Query 104542 TTTTACAAATATCTGCAT 104559
|| || || || |||||
Sbjct 53173 CTTAACGAAGATTTGCAT 53190
Score = 132 bits (146), Expect = 1e-25
Identities = 148/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 104362 TGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCC 104421
|||||||||||| ||||| || ||||| || || || | |||||||| ||||| |||||
Sbjct 53905 TGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGGGTACGTCCGTCTTCAAGTTGCTTTCC 53964
Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481
|||||| || | | |||||||| || || || ||||| || || || ||||| || ||
Sbjct 53965 AGCAAAGATCAAACGTTGTTGATCTGGTGGGATACCTTCCTTGTCTTGGATCTTAGCCTT 54024
Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|||||||| | | ||| | ||| || || | |||||| ||||| || || || ||
Sbjct 54025 AACATTTTCAATAGAATCAGACGATTCCACTTCCAATGTAATGGTCTTTCCTGTGAGGGT 54084
Query 104542 TTTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 54085 CTTAACGAAGATCTGCAT 54102
Score = 131 bits (144), Expect = 4e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||||||||| ||||| |||||||| || || || | || ||||| ||||| |||||
Sbjct 52538 GTAGATTCTTTTTGAATGTTATAGTCGGAAAGGGTACGTCCATCTTCAAGTTGCTTTCCG 52597
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || || | || || || || || || ||||| || || || ||||| || ||
Sbjct 52598 GCAAAGATCAGACGTTGCTGGTCTGGTGGGATACCTTCCTTGTCTTGGATCTTGGCCTTC 52657
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|||||||| | | ||| || |||||| || | |||||| ||||| || || || ||
Sbjct 52658 ACATTTTCAATTGAATCAGAAGATTCTACTTCCAATGTAATGGTCTTTCCTGTGAGGGTC 52717
Query 104543 TTTACAAATATCTGCAT 104559
||||| || || |||||
Sbjct 52718 TTTACGAAGATTTGCAT 52734
Score = 127 bits (140), Expect = 5e-24
Identities = 147/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 104362 TGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCC 104421
|||||||||||| ||||| || ||||| || || || | |||||||| ||||| |||||
Sbjct 53221 TGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGGGTACGTCCGTCTTCAAGTTGCTTTCC 53280
Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481
||||| || | | || || || || || || ||||| || || || ||||| || ||
Sbjct 53281 GGCAAAGATCAAACGTTGCTGGTCTGGTGGGATACCTTCCTTGTCTTGGATCTTGGCCTT 53340
Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|||||||| | || ||| | ||| ||||| | |||||| ||||| ||||| || ||
Sbjct 53341 AACATTTTCAATGGAATCAGATGATTCCACCTCCAATGTAATGGTCTTTCCAGTGAGGGT 53400
Query 104542 TTTTACAAATATCTGCAT 104559
|| || || || |||||
Sbjct 53401 CTTAACGAAGATTTGCAT 53418
Score = 118 bits (130), Expect = 2e-21
Identities = 145/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 104362 TGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCC 104421
|||||||||||| ||||| || ||||| || || || | |||||||| ||||| |||||
Sbjct 53449 TGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGGGTACGTCCGTCTTCAAGTTGCTTTCC 53508
Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481
||||| || | | ||||| || || || || ||||| || || || ||||| || ||
Sbjct 53509 GGCAAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCCTTGTCTTGGATCTTAGCCTT 53568
Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|||||||| | | ||| | ||| || || | |||||| ||||| || || || ||
Sbjct 53569 AACATTTTCAATAGAATCAGACGATTCCACTTCCAATGTAATGGTCTTTCCTGTGAGGGT 53628
Query 104542 TTTTACAAATATCTGCAT 104559
|| || || || |||||
Sbjct 53629 CTTAACGAAGATTTGCAT 53646
Score = 114 bits (126), Expect = 3e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 104362 TGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCC 104421
|||||||||||| ||||| || ||||| || || || | |||||||| ||||| |||||
Sbjct 53677 TGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGGGTACGTCCGTCTTCAAGTTGCTTTCC 53736
Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481
||||| || | | || || || || || || ||||| || || || ||||| || ||
Sbjct 53737 GGCAAAGATCAAACGTTGCTGGTCTGGTGGGATACCTTCCTTGTCTTGGATCTTAGCCTT 53796
Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|||||||| | | ||| | ||| || || | |||||| ||||| || || || ||
Sbjct 53797 AACATTTTCAATAGAATCAGACGATTCCACTTCCAATGTAATGGTCTTTCCTGTGAGGGT 53856
Query 104542 TTTTACAAATATCTGCAT 104559
|| || || || |||||
Sbjct 53857 CTTAACGAAGATTTGCAT 53874
>seq35
Length=1961283
Score = 131 bits (144), Expect = 4e-25
Identities = 145/193 (75%), Gaps = 3/193 (2%)
Strand=Plus/Plus
Query 269043 TATTTTCTTCTATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAAT 269102
||||| | |||| ||| ||| ||||| | ||| || | || |||||||| ||||
Sbjct 1196911 TATTTAATGCTATTGAAACCATGCCGTGTGTAAAAAAGAAGGCAGATTGGGCTCTTAAAT 1196970
Query 269103 GGATAAACGATAGC---GCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAG 269159
|||| | ||||| || ||| || |||||||||||||| ||||| || || ||||
Sbjct 1196971 GGATCAGTGATAGTAAAGCAACTTTTGGTGAAAGGTTAGTTGCATTTGCTGCAGTTGAAG 1197030
Query 269160 GTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGC 269219
||||||| || || || |||||| || | |||||||||||||||||||| | ||||
Sbjct 1197031 GTATATTTTTCTCTGGAAGTTTTGCTGCATTATTTTGGTTGAAGAAAAGAGGATTAATGC 1197090
Query 269220 CAGGATTAACTTT 269232
|||| ||||||||
Sbjct 1197091 CAGGTTTAACTTT 1197103
Score = 114 bits (126), Expect = 3e-20
Identities = 131/176 (74%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 268841 TTTATATCTTATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTA 268900
||||||||| | | | || |||||||| | | ||||| || || || ||||||||
Sbjct 1196650 TTTATATCTCACGTATTAGCATTTTTTGCTGCTTCAGATGGCATTGTCAATGAAAATCTT 1196709
Query 268901 GTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAG 268960
|| || | |||| |||||| || || | |||| || ||||||||||| || |||||
Sbjct 1196710 GTTGAAAGATTCTCTCAAGAAGTTCAAGTAACTGAGGCTAGATGTTTTTATGGGTTCCAA 1196769
Query 268961 ATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATAT 269016
||| || |||||||| |||||||| ||||| || ||||||| || || |||||
Sbjct 1196770 ATAATGATGGAAAATATACATTCAGAAATGTATAGCTTATTAATTGACACATATAT 1196825
>seq1042
Length=111944
Score = 113 bits (124), Expect = 1e-19
Identities = 142/195 (73%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 268841 TTTATATCTTATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTA 268900
|||||||| || || || || ||||| || | | |||| || |||| ||||||||
Sbjct 80708 TTTATATCCTACATACTAGCATTTTTAGCTGCTTCAAATGGCATAGTTAGTGAAAATCTT 80649
Query 268901 GTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAG 268960
|| | || | |||||| || || | |||| || ||||||||||| || |||||
Sbjct 80648 GTTAAACGATTTTCTCAAGAAGTTCAAGTAACTGAGGCTAGATGTTTTTATGGGTTCCAA 80589
Query 268961 ATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGAT 269020
||| ||||| ||||| |||||||| ||||| || ||||||||||||| ||||| |
Sbjct 80588 ATAATGATAGAGAATATACATTCAGAAATGTATAGCTTATTAATAGATACATATATTAAA 80529
Query 269021 GATAACAACGAAAAG 269035
|| ||| ||||||
Sbjct 80528 GACCCCAAAGAAAAG 80514
Score = 86.0 bits (94), Expect = 1e-11
Identities = 120/167 (72%), Gaps = 5/167 (3%)
Strand=Plus/Minus
Query 269071 TGTGAGaaaaaaaT--CTGAATGGGCTCTGAAATGGATAAACGATAGC---GCGCCTTAC 269125
|||| |||||||| | || |||| ||| |||||||| | ||||| || |||
Sbjct 80413 TGTGTAAAAAAAATGGCAGATTGGGTTCTTAAATGGATTACTGATAGTAAAGCAACTTTT 80354
Query 269126 GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCC 269185
|| ||||||||||| | ||||| ||||| |||||||||| || || || | || |
Sbjct 80353 GGTGAAAGGTTAGTGACATTTGCTGCTGTTAAAGGTATATTTTTATCTGGAAATGTTCCT 80294
Query 269186 GCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTT 269232
| || ||||||| ||||||||| | |||| ||| ||||||||
Sbjct 80293 TCAATAACATGGTTGACGAAAAGAGGATTAATGCTAGGCTTAACTTT 80247
>seq4
Length=2478080
Score = 105 bits (116), Expect = 2e-17
Identities = 146/204 (72%), Gaps = 3/204 (1%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||||||||| || || || |||||||| |||| | | || ||||||||| ||||||
Sbjct 1881869 GTAGATTCTTTTTGGATGTTGTAGTCAGAACGAGTACATCTGTGTTCTAGTTGATTTCCA 1881810
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGG---AGGTATTCCTTCTTTATCCTGAATCTTTGCT 104479
||||| | | | ||||| || || | || ||||||| || || ||||| |||
Sbjct 1881809 GCAAAGGTCAAACGTTGTTGGTCTGGTGCGGCGATGCCTTCTTGTTCTTGGATCTTGGCT 1881750
Query 104480 TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539
||||| ||||| | || ||| | || || || | | ||||| |||||||| |
Sbjct 1881749 TTTACTTTTTCAATGGAATCTGATGACTCAACTTCCAAAATGATAGTTTTACCAGTCAAA 1881690
Query 104540 GTTTTTACAAATATCTGCATTTTG 104563
||||| ||||| ||||| || |||
Sbjct 1881689 GTTTTGACAAAGATCTGTATGTTG 1881666
>seq231
Length=580210
Score = 104 bits (114), Expect = 5e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 104372 TTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT 104431
|| || || ||||| ||||| | || | || ||||| || || || || || || ||
Sbjct 340831 TTTTGGATGTTATAATCAGACAATGTACGTCCATCTTCAAGCTGCTTGCCGGCGAAGATC 340890
Query 104432 AGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCT 104491
| | |||||||| || || || ||||||||||| || || || ||||| ||||||||
Sbjct 340891 AAACGTTGTTGATCGGGTGGGATACCTTCTTTATCTTGGATTTTGGCTTTGACATTTTCG 340950
Query 104492 ACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAAT 104551
| || || || || ||||| || || || ||||| || ||||| ||||| || ||
Sbjct 340951 ATAGTGTCTGAAGACTCGACCTCAAGGGTGATGGTCTTCCCTGTAAGGGTTTTCACGAAA 341010
Query 104552 ATCTGCATTTTG 104563
|| ||||| |||
Sbjct 341011 ATTTGCATGTTG 341022
>seq1265
Length=163832
Score = 96.9 bits (106), Expect = 8e-15
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392
|| ||||||| | |||||||| || | ||| || |||||||| ||||| || ||||||
Sbjct 84834 CCACCTCTTAAACGAAGTACTAAGTGAAGTGTTGACTCTTTCTGTATATTGTAATCAGAT 84775
Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452
|| || | || ||||| | ||| || ||||||||||| || | |||||||| |||||
Sbjct 84774 AGCGTGCGCCCATCTTCCAATTGCTTACCAGCAAAAATAAGACGTTGTTGATCCGGAGGA 84715
Query 104453 ATTCCT 104458
|| |||
Sbjct 84714 ATGCCT 84709
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151045451413900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |