Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq276 178 3e-39 seq328 174 4e-38 seq2302 154 3e-32 seq35 131 4e-25 seq1042 113 1e-19 seq4 105 2e-17 seq231 104 5e-17 seq1265 96.9 8e-15 >seq276 Length=376631 Score = 178 bits (196), Expect = 3e-39 Identities = 178/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || | ||||||| || | ||| |||||||||||||||||||||||| Sbjct 241197 ATTCCACCTCGAAGACGGAGTACTAAGTGAAGTGTTGATTCTTTCTGAATATTATAGTCA 241138 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||| || | || ||||| | ||| ||||| |||||||||| | ||||||||| || Sbjct 241137 GATAACGTACGGCCATCTTCCAATTGCTTTCCGGCAAAAATTAATCGCTGTTGATCTGGT 241078 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||||||||| || ||||| || ||||| |||||||| | | ||| | |||| Sbjct 241077 GGGATTCCTTCTTTGTCTTGAATTTTCGCTTTCACATTTTCAATAGAATCTGACGATTCT 241018 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || | || || || || |||||||| ||||| ||||| || |||||| Sbjct 241017 ACTTCCAAAGTGATGGTTTTGCCAGTAAGGGTTTTCACAAAGATTTGCATT 240967 Score = 174 bits (192), Expect = 4e-38 Identities = 177/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || | ||||||| || | ||| ||||||||||||||||||||||| Sbjct 241653 ATTCCACCTCGAAGACGGAGTACTAAGTGAAGTGTTGATTCTTTCTGAATATTATAGTCG 241594 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||| ||| | || ||||| | ||| ||||| |||||||||| | ||||||||| || Sbjct 241593 GATAAAGTACGGCCATCTTCCAATTGCTTTCCGGCAAAAATTAATCGCTGTTGATCTGGT 241534 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||| || ||||| || ||||| |||||||| | | || || |||| Sbjct 241533 GGGATCCCTTCTTTGTCTTGAATTTTAGCTTTCACATTTTCAATAGAGTCTGAAGATTCT 241474 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || | || || || || |||||||| ||||| ||||| || |||||| Sbjct 241473 ACTTCCAAAGTGATGGTTTTGCCAGTAAGGGTTTTCACAAAGATTTGCATT 241423 Score = 170 bits (188), Expect = 4e-37 Identities = 178/234 (76%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || | ||||||| || | ||| ||||||||||||||||||||||| Sbjct 240741 ATTCCACCTCGAAGACGGAGTACTAAGTGAAGTGTTGATTCTTTCTGAATATTATAGTCG 240682 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||| || | || ||||| | ||| ||||| |||||||||| | ||||||||| || Sbjct 240681 GATAACGTACGGCCATCTTCCAATTGCTTTCCGGCAAAAATTAATCGCTGTTGATCTGGT 240622 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||||||||| || ||||| || ||||| |||||||| | | || | |||| Sbjct 240621 GGGATTCCTTCTTTGTCTTGAATTTTAGCTTTCACATTTTCAATAGAGTCTGATGATTCT 240562 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || || | || || || || |||||||| ||||| ||||| || ||||| ||| Sbjct 240561 ACTTCCAAAGTTATGGTTTTTCCAGTAAGAGTTTTCACAAAGATTTGCATCTTG 240508 Score = 168 bits (186), Expect = 2e-36 Identities = 176/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || | ||||||| || | ||| ||||||||||||||||||||||| Sbjct 240969 ATTCCACCTCGAAGACGGAGTACTAAGTGAAGTGTTGATTCTTTCTGAATATTATAGTCG 240910 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||| || | || ||||| | ||| ||||| |||||||||| | ||||||||| || Sbjct 240909 GATAACGTACGGCCATCTTCCAATTGCTTTCCGGCAAAAATTAATCGCTGTTGATCTGGT 240850 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||||||||| || ||||| || ||||| |||||||| | | || | |||| Sbjct 240849 GGGATTCCTTCTTTGTCTTGAATTTTAGCTTTCACATTTTCAATAGAGTCTGACGATTCT 240790 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || | || || || || |||||||| ||||| ||||| || |||||| Sbjct 240789 ACTTCCAAAGTGATGGTTTTGCCAGTAAGGGTTTTCACAAAGATTTGCATT 240739 Score = 165 bits (182), Expect = 2e-35 Identities = 175/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || | ||||||| || | ||| ||||||||||||||||||||||| Sbjct 241425 ATTCCACCTCGAAGACGGAGTACTAAGTGAAGTGTTGATTCTTTCTGAATATTATAGTCG 241366 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||| || | || ||||| | ||| ||||| |||||||||| | ||||||||| || Sbjct 241365 GATAACGTACGGCCATCTTCCAATTGCTTTCCGGCAAAAATTAATCGCTGTTGATCTGGT 241306 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||| || ||||| || ||||| |||||||| | | || | |||| Sbjct 241305 GGGATCCCTTCTTTGTCTTGAATTTTAGCTTTCACATTTTCAATAGAGTCTGACGATTCT 241246 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || | || || || || |||||||| ||||| ||||| || |||||| Sbjct 241245 ACTTCCAAAGTGATGGTTTTGCCAGTAAGGGTTTTCACAAAGATTTGCATT 241195 >seq328 Length=376668 Score = 174 bits (192), Expect = 4e-38 Identities = 220/300 (73%), Gaps = 2/300 (1%) Strand=Plus/Plus Query 238590 CTATGGAATTCCGCCCAGATACAAATGGTAAGACTAGGCAAAATGCATAGTTTCTTACGA 238649 || |||||||| || || ||||| |||||| |||||| ||||| ||||| |||| Sbjct 43975 CTGTGGAATTCTGCACAAATACAGTTGGTAAAGGAAGGCAAGATGCACGGTTTCCTACGC 44034 Query 238650 ATGTATTGGGCTAAAAAGATACTTGAATGGACTAGAT-CTCCAAAGGAAGCTCTTAGATA 238708 ||||| ||||| ||||||||||| ||||||||| ||| ||||| | ||| || | | Sbjct 44035 ATGTACTGGGCAAAAAAGATACTAGAATGGACT-GATACTCCAGATAGAGCACTAGCAGA 44093 Query 238709 TAGTATTTATCTGAACGATAAATACGAACTCGACGGTACGGATCCTAACGGATACGTAGG 238768 | |||||||| || || ||||| | || ||| || || | || | || || Sbjct 44094 TGCAATTTATCTTAATGACAAATATAGCATGGATGGTCGTGACCCGAGTGGTTTTGTTGG 44153 Query 238769 TTGTATGTGGTCAATATGTGGATTACACGATAGGGCATGGTCTGAGAGACCTATATTTGG 238828 |||||||||||||||||||| | || ||| || |||| || ||| || ||||| Sbjct 44154 ATGTATGTGGTCAATATGTGGTATTCATGATCAGGGATGGAAAGAAAGAGAAATTTTTGG 44213 Query 238829 AAAAGTTAGATACATGAATTATGAAGGAACTAAGAAAAAATTTGATGTAAATGCTTTTAT 238888 |||| |||| || ||||| |||| |||| ||||| ||| ||||| ||||||||||||| Sbjct 44214 AAAAATTAGGTATATGAACTATGCAGGATGTAAGAGAAAGTTTGACATAAATGCTTTTAT 44273 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 237973 AAGTGGTATTTATACAAGTTGACGCTCACAATATTGTACCTTGTTGGGAAGCATCTCATA 238032 ||||| | ||||||| || || || || ||||||||||||||||||| || ||| | | Sbjct 43122 AAGTGCCAGTTATACAGGTAGATGCCCATAATATTGTACCTTGTTGGGTGGCTTCTGACA 43181 Query 238033 AACAAGAATACGGTGCTAGAACATTACGTAAGAAAATAAAT 238073 |||||||||| || |||||| |||| || ||||| ||| Sbjct 43182 AACAAGAATATTCCGCAAGAACAATACGAAACAAAATCAAT 43222 >seq2302 Length=121279 Score = 154 bits (170), Expect = 3e-32 Identities = 153/198 (77%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 104362 TGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCC 104421 |||||||||||| ||||| || ||||| || || || | |||||||| ||||| ||||| Sbjct 54133 TGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGGGTACGTCCGTCTTCAAGTTGCTTTCC 54192 Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481 ||||| || | | ||||| || || || || |||||||| || || ||||| ||||| Sbjct 54193 GGCAAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTGTCTTGGATCTTGGCTTT 54252 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||||||| | || ||| | ||| ||||| | |||||| ||||| ||||| || || Sbjct 54253 TACATTTTCAATGGAATCAGATGATTCCACCTCCAATGTAATGGTCTTTCCAGTGAGGGT 54312 Query 104542 TTTTACAAATATCTGCAT 104559 |||||||| || ||||| Sbjct 54313 CTTTACAAAGATTTGCAT 54330 Score = 150 bits (166), Expect = 4e-31 Identities = 154/201 (77%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 |||||||||||||| || || |||||||| || || | |||||||| ||||| ||||| Sbjct 54362 GTAGATTCTTTCTGGATGTTGTAGTCAGAAAGTGTGCGTCCGTCTTCAAGTTGCTTTCCG 54421 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | | ||||| ||||| || || |||||||| || || ||||| |||||| Sbjct 54422 GCAAAGATCAAACGTTGTTGGTCAGGTGGAATACCTTCTTTGTCTTGGATCTTAGCTTTT 54481 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||||||| | || ||| | || || || | || ||||| |||||||| | ||| Sbjct 54482 ACATTTTCAATGGAATCTGATGACTCAACTTCCAAAGTGATAGTTTTACCAGTCAAAGTT 54541 Query 104543 TTTACAAATATCTGCATTTTG 104563 || ||||| |||||||| ||| Sbjct 54542 TTGACAAAGATCTGCATGTTG 54562 Score = 140 bits (154), Expect = 7e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||||||||| ||||| ||||||||||| || || | |||||||| ||||| ||||| Sbjct 52766 GTAGATTCTTTTTGAATGTTATAGTCAGAAAGTGTGCGTCCGTCTTCAAGTTGCTTTCCG 52825 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | | ||||| || || || || ||||| || || || ||||| || || Sbjct 52826 GCAAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCCTTGTCTTGGATCTTAGCCTTA 52885 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||||||| | || ||| | ||| ||||| | |||||| ||||| ||||| || || Sbjct 52886 ACATTTTCAATGGAATCAGATGATTCCACCTCCAATGTAATGGTCTTTCCAGTGAGGGTC 52945 Query 104543 TTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 52946 TTAACGAAGATTTGCAT 52962 Score = 132 bits (146), Expect = 1e-25 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 104362 TGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCC 104421 |||||||||||| ||||| || ||||| || || || | |||||||| ||||| ||||| Sbjct 52993 TGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGGGTACGTCCGTCTTCAAGTTGCTTTCC 53052 Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481 |||||| || | | || || || || || || ||||| || || || ||||| || || Sbjct 53053 AGCAAAGATCAAACGTTGCTGGTCTGGTGGGATACCTTCCTTGTCTTGGATCTTGGCCTT 53112 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 |||||||| | || ||| | ||| ||||| | |||||| ||||| ||||| || || Sbjct 53113 AACATTTTCAATGGAATCAGATGATTCCACCTCCAATGTAATGGTCTTTCCAGTGAGGGT 53172 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 53173 CTTAACGAAGATTTGCAT 53190 Score = 132 bits (146), Expect = 1e-25 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 104362 TGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCC 104421 |||||||||||| ||||| || ||||| || || || | |||||||| ||||| ||||| Sbjct 53905 TGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGGGTACGTCCGTCTTCAAGTTGCTTTCC 53964 Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481 |||||| || | | |||||||| || || || ||||| || || || ||||| || || Sbjct 53965 AGCAAAGATCAAACGTTGTTGATCTGGTGGGATACCTTCCTTGTCTTGGATCTTAGCCTT 54024 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 |||||||| | | ||| | ||| || || | |||||| ||||| || || || || Sbjct 54025 AACATTTTCAATAGAATCAGACGATTCCACTTCCAATGTAATGGTCTTTCCTGTGAGGGT 54084 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 54085 CTTAACGAAGATCTGCAT 54102 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||||||||| ||||| |||||||| || || || | || ||||| ||||| ||||| Sbjct 52538 GTAGATTCTTTTTGAATGTTATAGTCGGAAAGGGTACGTCCATCTTCAAGTTGCTTTCCG 52597 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | || || || || || || ||||| || || || ||||| || || Sbjct 52598 GCAAAGATCAGACGTTGCTGGTCTGGTGGGATACCTTCCTTGTCTTGGATCTTGGCCTTC 52657 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||||||| | | ||| || |||||| || | |||||| ||||| || || || || Sbjct 52658 ACATTTTCAATTGAATCAGAAGATTCTACTTCCAATGTAATGGTCTTTCCTGTGAGGGTC 52717 Query 104543 TTTACAAATATCTGCAT 104559 ||||| || || ||||| Sbjct 52718 TTTACGAAGATTTGCAT 52734 Score = 127 bits (140), Expect = 5e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 104362 TGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCC 104421 |||||||||||| ||||| || ||||| || || || | |||||||| ||||| ||||| Sbjct 53221 TGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGGGTACGTCCGTCTTCAAGTTGCTTTCC 53280 Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481 ||||| || | | || || || || || || ||||| || || || ||||| || || Sbjct 53281 GGCAAAGATCAAACGTTGCTGGTCTGGTGGGATACCTTCCTTGTCTTGGATCTTGGCCTT 53340 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 |||||||| | || ||| | ||| ||||| | |||||| ||||| ||||| || || Sbjct 53341 AACATTTTCAATGGAATCAGATGATTCCACCTCCAATGTAATGGTCTTTCCAGTGAGGGT 53400 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 53401 CTTAACGAAGATTTGCAT 53418 Score = 118 bits (130), Expect = 2e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 104362 TGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCC 104421 |||||||||||| ||||| || ||||| || || || | |||||||| ||||| ||||| Sbjct 53449 TGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGGGTACGTCCGTCTTCAAGTTGCTTTCC 53508 Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481 ||||| || | | ||||| || || || || ||||| || || || ||||| || || Sbjct 53509 GGCAAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCCTTGTCTTGGATCTTAGCCTT 53568 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 |||||||| | | ||| | ||| || || | |||||| ||||| || || || || Sbjct 53569 AACATTTTCAATAGAATCAGACGATTCCACTTCCAATGTAATGGTCTTTCCTGTGAGGGT 53628 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 53629 CTTAACGAAGATTTGCAT 53646 Score = 114 bits (126), Expect = 3e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 104362 TGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCC 104421 |||||||||||| ||||| || ||||| || || || | |||||||| ||||| ||||| Sbjct 53677 TGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGGGTACGTCCGTCTTCAAGTTGCTTTCC 53736 Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481 ||||| || | | || || || || || || ||||| || || || ||||| || || Sbjct 53737 GGCAAAGATCAAACGTTGCTGGTCTGGTGGGATACCTTCCTTGTCTTGGATCTTAGCCTT 53796 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 |||||||| | | ||| | ||| || || | |||||| ||||| || || || || Sbjct 53797 AACATTTTCAATAGAATCAGACGATTCCACTTCCAATGTAATGGTCTTTCCTGTGAGGGT 53856 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 53857 CTTAACGAAGATTTGCAT 53874 >seq35 Length=1961283 Score = 131 bits (144), Expect = 4e-25 Identities = 145/193 (75%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 269043 TATTTTCTTCTATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAAT 269102 ||||| | |||| ||| ||| ||||| | ||| || | || |||||||| |||| Sbjct 1196911 TATTTAATGCTATTGAAACCATGCCGTGTGTAAAAAAGAAGGCAGATTGGGCTCTTAAAT 1196970 Query 269103 GGATAAACGATAGC---GCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAG 269159 |||| | ||||| || ||| || |||||||||||||| ||||| || || |||| Sbjct 1196971 GGATCAGTGATAGTAAAGCAACTTTTGGTGAAAGGTTAGTTGCATTTGCTGCAGTTGAAG 1197030 Query 269160 GTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGC 269219 ||||||| || || || |||||| || | |||||||||||||||||||| | |||| Sbjct 1197031 GTATATTTTTCTCTGGAAGTTTTGCTGCATTATTTTGGTTGAAGAAAAGAGGATTAATGC 1197090 Query 269220 CAGGATTAACTTT 269232 |||| |||||||| Sbjct 1197091 CAGGTTTAACTTT 1197103 Score = 114 bits (126), Expect = 3e-20 Identities = 131/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 268841 TTTATATCTTATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTA 268900 ||||||||| | | | || |||||||| | | ||||| || || || |||||||| Sbjct 1196650 TTTATATCTCACGTATTAGCATTTTTTGCTGCTTCAGATGGCATTGTCAATGAAAATCTT 1196709 Query 268901 GTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAG 268960 || || | |||| |||||| || || | |||| || ||||||||||| || ||||| Sbjct 1196710 GTTGAAAGATTCTCTCAAGAAGTTCAAGTAACTGAGGCTAGATGTTTTTATGGGTTCCAA 1196769 Query 268961 ATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATAT 269016 ||| || |||||||| |||||||| ||||| || ||||||| || || ||||| Sbjct 1196770 ATAATGATGGAAAATATACATTCAGAAATGTATAGCTTATTAATTGACACATATAT 1196825 >seq1042 Length=111944 Score = 113 bits (124), Expect = 1e-19 Identities = 142/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 268841 TTTATATCTTATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTA 268900 |||||||| || || || || ||||| || | | |||| || |||| |||||||| Sbjct 80708 TTTATATCCTACATACTAGCATTTTTAGCTGCTTCAAATGGCATAGTTAGTGAAAATCTT 80649 Query 268901 GTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAG 268960 || | || | |||||| || || | |||| || ||||||||||| || ||||| Sbjct 80648 GTTAAACGATTTTCTCAAGAAGTTCAAGTAACTGAGGCTAGATGTTTTTATGGGTTCCAA 80589 Query 268961 ATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGAT 269020 ||| ||||| ||||| |||||||| ||||| || ||||||||||||| ||||| | Sbjct 80588 ATAATGATAGAGAATATACATTCAGAAATGTATAGCTTATTAATAGATACATATATTAAA 80529 Query 269021 GATAACAACGAAAAG 269035 || ||| |||||| Sbjct 80528 GACCCCAAAGAAAAG 80514 Score = 86.0 bits (94), Expect = 1e-11 Identities = 120/167 (72%), Gaps = 5/167 (3%) Strand=Plus/Minus Query 269071 TGTGAGaaaaaaaT--CTGAATGGGCTCTGAAATGGATAAACGATAGC---GCGCCTTAC 269125 |||| |||||||| | || |||| ||| |||||||| | ||||| || ||| Sbjct 80413 TGTGTAAAAAAAATGGCAGATTGGGTTCTTAAATGGATTACTGATAGTAAAGCAACTTTT 80354 Query 269126 GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCC 269185 || ||||||||||| | ||||| ||||| |||||||||| || || || | || | Sbjct 80353 GGTGAAAGGTTAGTGACATTTGCTGCTGTTAAAGGTATATTTTTATCTGGAAATGTTCCT 80294 Query 269186 GCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTT 269232 | || ||||||| ||||||||| | |||| ||| |||||||| Sbjct 80293 TCAATAACATGGTTGACGAAAAGAGGATTAATGCTAGGCTTAACTTT 80247 >seq4 Length=2478080 Score = 105 bits (116), Expect = 2e-17 Identities = 146/204 (72%), Gaps = 3/204 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||||||||| || || || |||||||| |||| | | || ||||||||| |||||| Sbjct 1881869 GTAGATTCTTTTTGGATGTTGTAGTCAGAACGAGTACATCTGTGTTCTAGTTGATTTCCA 1881810 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGG---AGGTATTCCTTCTTTATCCTGAATCTTTGCT 104479 ||||| | | | ||||| || || | || ||||||| || || ||||| ||| Sbjct 1881809 GCAAAGGTCAAACGTTGTTGGTCTGGTGCGGCGATGCCTTCTTGTTCTTGGATCTTGGCT 1881750 Query 104480 TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 ||||| ||||| | || ||| | || || || | | ||||| |||||||| | Sbjct 1881749 TTTACTTTTTCAATGGAATCTGATGACTCAACTTCCAAAATGATAGTTTTACCAGTCAAA 1881690 Query 104540 GTTTTTACAAATATCTGCATTTTG 104563 ||||| ||||| ||||| || ||| Sbjct 1881689 GTTTTGACAAAGATCTGTATGTTG 1881666 >seq231 Length=580210 Score = 104 bits (114), Expect = 5e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 104372 TTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT 104431 || || || ||||| ||||| | || | || ||||| || || || || || || || Sbjct 340831 TTTTGGATGTTATAATCAGACAATGTACGTCCATCTTCAAGCTGCTTGCCGGCGAAGATC 340890 Query 104432 AGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCT 104491 | | |||||||| || || || ||||||||||| || || || ||||| |||||||| Sbjct 340891 AAACGTTGTTGATCGGGTGGGATACCTTCTTTATCTTGGATTTTGGCTTTGACATTTTCG 340950 Query 104492 ACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAAT 104551 | || || || || ||||| || || || ||||| || ||||| ||||| || || Sbjct 340951 ATAGTGTCTGAAGACTCGACCTCAAGGGTGATGGTCTTCCCTGTAAGGGTTTTCACGAAA 341010 Query 104552 ATCTGCATTTTG 104563 || ||||| ||| Sbjct 341011 ATTTGCATGTTG 341022 >seq1265 Length=163832 Score = 96.9 bits (106), Expect = 8e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||||| | |||||||| || | ||| || |||||||| ||||| || |||||| Sbjct 84834 CCACCTCTTAAACGAAGTACTAAGTGAAGTGTTGACTCTTTCTGTATATTGTAATCAGAT 84775 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 || || | || ||||| | ||| || ||||||||||| || | |||||||| ||||| Sbjct 84774 AGCGTGCGCCCATCTTCCAATTGCTTACCAGCAAAAATAAGACGTTGTTGATCCGGAGGA 84715 Query 104453 ATTCCT 104458 || ||| Sbjct 84714 ATGCCT 84709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151045451413900