Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_005905.1
Length=86462
Score E
Sequences producing significant alignments: (Bits) Value
seq611 104 1e-17
>seq611
Length=234137
Score = 104 bits (114), Expect = 1e-17
Identities = 172/243 (71%), Gaps = 14/243 (6%)
Strand=Plus/Plus
Query 3902 GGGTTCTCGGTTGAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTG 3961
||||| || ||||| |||||||||| | | |||||||| ||||| ||| ||||||||
Sbjct 136684 GGGTTTTCTGTTGATGGTCAAGAAAGTTTCCAAGAAATTTTATCTAAACGATTGTATTTG 136743
Query 3962 TGTCAATGTTTAATTGCATTGATGATCATACGAATTGGTGGTCAT----TGTGTTATCAA 4017
|||||| ||| ||| |||| || | | | ||||| ||| ||||| ||
Sbjct 136744 TGTCAAGCTTTGGCTGCTTTGAGTATTCTTCAACCGGGTGGACATTTCATGTGT----AA 136799
Query 4018 ATTTTTCGATATATTTACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTA-TAGATCTT 4076
| |||| |||||||| || ||||||||||||||| ||| | |||| ||| ||
Sbjct 136800 ACTTTTTGATATATTCACTGAATTTAGTGCTGGTTTATTGTTCCTTTTGTACCAGA-GTT 136858
Query 4077 TTAATCGTATTTGTATTTTCAAACCA--CATTCATCGCGACCGGCCAATTCTGAAAGATA 4134
|||| | || |||||| ||||||| || |||| || || ||||||||||| ||
Sbjct 136859 TTAAACAAATCAGTATTTACAAACCAGTCACGAGTCGC--CCTGCAAATTCTGAAAGGTA 136916
Query 4135 TTT 4137
||
Sbjct 136917 ATT 136919
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 276472960859275
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |