Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_006657.1 Length=19820 Score E Sequences producing significant alignments: (Bits) Value seq29 129 7e-26 seq343 107 2e-19 seq648 105 8e-19 seq11 100 4e-17 seq412 91.5 2e-14 seq128 89.7 7e-14 seq537 86.0 8e-13 seq149 86.0 8e-13 seq405 82.4 1e-11 seq245 80.6 3e-11 >seq29 Length=1447021 Score = 129 bits (142), Expect = 7e-26 Identities = 226/325 (70%), Gaps = 8/325 (2%) Strand=Plus/Plus Query 12235 ATCAAAGAATGCCATAGCTACAGTTTCTGGGTTTAAATACCACAAATGCATGCTAAATTT 12294 |||||| ||||||| ||||| ||||| || |||||||||||| || | | ||| Sbjct 1373024 ATCAAAAAATGCCAATGCTACTGTTTCAGGTGCTAAATACCACAAGTGTCCACATAGTTT 1373083 Query 12295 TTTCAATGCCACTTCAGATATTTTAGCATCTGTCGATTGATAATCAATAAGTTCCTTTAA 12354 ||| |||| || ||| ||||| || | | || |||||| | || || || Sbjct 1373084 TTTTAATGTTGATTGAGAAATTTTTTTATGTATATTTTCATAATCGACGAGACTTTTCAA 1373143 Query 12355 AAATGATAAATCATTATTTGGAGCTTCAGATGCGAGAGG---ACAAGTGAACCATGCTTT 12411 |||| ||| || | | ||||||| ||| || | ||| |||| |||||||| || Sbjct 1373144 AAATTGTAAGTCTTGAAATGGAGCTAAAGAGGCAATAGGTGCACAA---AACCATGCCTT 1373200 Query 12412 GATATACACTGTAGCAATAAAAACACAAATTTCA-GAAACGGATTTGATTAATTTCACCG 12470 ||||||| | | || ||||| ||||||| | ||| | || | || |||| Sbjct 1373201 AATATACAATCGAATAAGAAAAATACAAATTGAACGAATTGAATCTTCTTCATTTTTTTT 1373260 Query 12471 TCATTTTGAATTGTTTACGAAATAAAAATATTTTTATAGTATATATGGCTTTTGCCATCC 12530 | |||| ||||| |||||||||| ||||||||||| || ||| ||||| || | ||||| Sbjct 1373261 TAATTTA-AATTGCTTACGAAATATAAATATTTTTAGAGAATAAATGGCCTTAGACATCC 1373319 Query 12531 ACCTAGCGTGGTGGAATGCACCCGG 12555 | | |||||||| | |||||| || Sbjct 1373320 AACGGGCGTGGTGCATTGCACCTGG 1373344 >seq343 Length=673464 Score = 107 bits (118), Expect = 2e-19 Identities = 484/748 (65%), Gaps = 47/748 (6%) Strand=Plus/Minus Query 12233 TCATCAAAGAATGCCATAGCTACAGTTTCTGGGTTTAAATACCACAAATGCATGCTAAAT 12292 ||||||||||| | | || ||| ||| |||||||||||||||| ||| ||| Sbjct 194957 TCATCAAAGAAAGATAATGCAGCAGCCTCTTCAGTTAAATACCACAAATGGTTGCATAAT 194898 Query 12293 TTTTTCAATGCCACTTCAGATATTTTAGCATCTGTCGATTGATAATCA-ATAAGTTCCT- 12350 |||| | || ||| |||||||| ||| || | | | ||| |||| ||| | Sbjct 194897 TTTTGAATTGATACTCTAGATATTTC----TCTATCAAATACT--TCATATAATTTCATA 194844 Query 12351 ----TTAAAAATGATAAATCATTATTTGGAGCTTCAGATGCGAGAGGACAAGTGAACCAT 12406 ||| |||| |||| || | |||||| | | | || | |||||||| ||||| Sbjct 194843 TCTTTTATAAATTATAAGTCTTGATTTGGGGACTTATTTGGCAATGGACAAGTAAACCAA 194784 Query 12407 GCTTTGATATACACTGTAGCAATAAAAACACAAATTTCAGAAACGGATTTGATTAATTTC 12466 ||||||| || | | || ||||||||||||||||||| | | ||| || | Sbjct 194783 GCTTTGACGTAAAATTTAATAATAAAAACACAAATTTCACCGATTGCTTTTTTTGTTAAG 194724 Query 12467 ACCGTCATTTTGAATTGTTTACGAAATAAAAATATTTTTATAGTATATATGGCTTTTGCC 12526 | | || ||| |||| | | ||| ||||||||||||| ||| || ||| |||| Sbjct 194723 TCGGAAATATTGTATTGGCTTCTAAACAAAAATATTTTTAAGCAATAAATTGCTCGTGCC 194664 Query 12527 ATCCACCTAGCGTGGTGGAATGCACCCGG--------TTTTCGAAATTTTACTTAACTGC 12578 ||||||| || || || | || || || |||| ||||||| || | | Sbjct 194663 ATCCACCGGGCTTGATGCATGGCTCCGGGAGGATGCATTTT---AATTTTATTT---TCC 194610 Query 12579 AGGGAACTTTA---CCAATAAATATCTGAACAAGCTCCAAAAGTTCCCGGTAGTCTTCCC 12635 | || ||| |||||||| || | | |||||||| ||| || || ||| | | Sbjct 194609 A---AA--TTACCGCCAATAAAAATAAATATTAACTCCAAAAATTCACGATAATCTCCAC 194555 Query 12636 TTGGTTGATTTGAATC-AAGTTGCTTTTGGATAAAGTGATTAATGTCATCAATATGATTT 12694 || || || | || || || ||||| | ||| | ||| || || || |||| Sbjct 194554 GAGGCTGTTTAGTTTCTAATTTACTTTT-AACAAAATTCAGAATATCTTCTTTAACATTT 194496 Query 12695 TGTATTTTTTCTTGCACAT-ACGAATCTTCAATCCCATTAGAATATTGACTTATATC-AA 12752 | || | ||||| | ||||||||| || | ||||| | ||||| || Sbjct 194495 TCTAAAGCCAC-GCCACATGCCTGATCTTCAATTCCGATGTTATATTTGTTAATATCTAA 194437 Query 12753 TTTCGCCCCAGCTCTCTCGAAATCTTTTAAATAAAGGTACATCAGGACCTGAGGT---TG 12809 ||| || || | | |||| |||||||||| || | | || | ||| || | Sbjct 194436 TTTATACCATTCT-TTTTGAAAATTTTTAAATAATGGAATGGCTGGGCTTGATGTAACTT 194378 Query 12810 TAGGTATTTTAAGTTCAAAAACACCCCTGAGGATAAGTTCAAATATGTGATGCCTGCAAG 12869 |||||||||| |||||||||| || | || || ||| | || |||||||| |||| Sbjct 194377 CTGGTATTTTAATTTCAAAAACAGATCTCAAAATTAGCTCATAAATATGATGCCTACAAG 194318 Query 12870 GCAAATACAATAGttttttttCAAGCAACCGTTCCAGTGAAACTGCA-GCTCC-TTTACT 12927 | | ||| ||||| | ||| | || ||| || | ||| | || ||||| |||| Sbjct 194317 GAAGATATAATAGGTCTTTACCGAGTTTTTGTT-CAATTAAAATACATGCTCCATTTAAG 194259 Query 12928 TGATCCTAGATTTGCAGCAGTAGTATCA 12955 | |||| ||| | |||||| |||||| Sbjct 194258 CG-TCCTGTATTGGAAGCAGTTGTATCA 194232 >seq648 Length=167369 Score = 105 bits (116), Expect = 8e-19 Identities = 203/297 (68%), Gaps = 2/297 (1%) Strand=Plus/Minus Query 12269 AAATACCACAAATGCATGCTAAATTTTTTCAATGCCACTTCAGATATTTTAGCATCTGTC 12328 |||||||| | ||| || |||||||||| || |||||||||| || ||||| | Sbjct 66138 AAATACCATAGATGATTGATAAATTTTTTTTGTGTAACTTCAGATAACTTTTCATCTATT 66079 Query 12329 GATTGATAATCAATAAGTTCCTTTAAAAATGATAAATCATTATTTGGAGCTTCAGATGCG 12388 | || ||||||| ||| || ||||||| ||| || | ||| || | | || Sbjct 66078 GTTTTATAATCATAAAGGTCACGTAAAAATTGTAAGTCTTGGCGTGGTGCAAAACAAGCA 66019 Query 12389 AGAGGACAAGTGAACCATGCTTTGATATA-CACTGTAGCAATAAAAACACAAATTTCAGA 12447 || | ||||||||||||| | ||| || || | ||||||||| |||||| ||| Sbjct 66018 TTTGGGGCATTGAACCATGCTTTAACATAGCAATGAA-CAATAAAAATACAAATGTCACG 65960 Query 12448 AACGGATTTGATTAATTTCACCGTCATTTTGAATTGTTTACGAAATAAAAATATTTTTAT 12507 ||| || | | | | | | | ||| ||| || ||||| || ||||||||||| Sbjct 65959 AACTGAATCGTATTCTCTTTTGTTTAATTTATATTCTTGACGAAGTATAAATATTTTTAA 65900 Query 12508 AGTATATATGGCTTTTGCCATCCACCTAGCGTGGTGGAATGCACCCGGTTTTCGAAA 12564 | ||||||||| || | |||||| | ||| || || | ||| || || |||||| Sbjct 65899 ACAATATATGGCCTTCGACATCCAGCGAGCATGATGAATTGCTCCTGGAACTCGAAA 65843 >seq11 Length=1373071 Score = 100 bits (110), Expect = 4e-17 Identities = 443/679 (65%), Gaps = 28/679 (4%) Strand=Plus/Minus Query 12212 TTGATGTTTGATGATATTCTTTCATCAAAGAATGCCATAGCTACAGTTTCTGGGTTTAAA 12271 ||| | | |||||||| | | |||||||| ||||| | | | |||||| |||| Sbjct 1092510 TTGGTTTGTGATGATACTTTGTCATCAAAAAATGCTAATGAAGTCGCTTCTGGAGTTAAG 1092451 Query 12272 TACCACAAATGCATGCTAAATTTTTTCAATGCC-ACTTCAGATATTTTAGCATCTGTCGA 12330 ||||| ||||| | | |||||| || || |||| ||| |||| |||| | Sbjct 1092450 TACCATAAATGACCACACATTTTTTTTAACGCTGACTT-AGAAATTTGTTCATCAATAAC 1092392 Query 12331 TTGATAATCAATA-AGTTCCTTTAA-AAATGATAAATCATTATTTGGAGCTT---CAGAT 12385 | ||| ||||| | | |||||| |||| || || | ||||||||| ||| Sbjct 1092391 CTCATA--CAATATAATATCTTTAATAAATTGCAAGTCCATGTTTGGAGCTAGAGCAGCA 1092334 Query 12386 GCGAGAGGACAAGTGAACCATGCTTTGATATACACTGTAGCAATAAAAACACAAATTTCA 12445 || || |||| |||||| ||| ||||| | | | ||||||| ||| | ||| Sbjct 1092333 GCTCTAGCACAA---AACCATTGTTTTATATATATACGAACTATAAAAATACATAAGTCA 1092277 Query 12446 -GAAACGGATTTGATTAATTTCACCGTCATTTTGAATTGTTTACGAAATAAAAATATTTT 12504 | || | ||| || ||| | || | ||| |||| |||||||||||||||||||| Sbjct 1092276 CGTAAAGCATTATTTTCTTTTAAA-GTTAATTTAAATTCGTTACGAAATAAAAATATTTT 1092218 Query 12505 TATAGTATATATGGCTTTTGCCATCCACCTAGCGTGGTGGAATGCACCCGG--TTTTCGA 12562 ||||| ||| || ||||||| |||||| | |||||| || | || || || ||| | Sbjct 1092217 TATAGAATAAATAGCTTTTGACATCCATCGAGCGTGATGTATTGGCCCAGGAACTTTGAA 1092158 Query 12563 AATTTTACTTAACTGCAGGGAACTTTACCAATAAATATCTGAACAAGCTCCAAAAGTTCC 12622 || | ||| | || | || || ||||| ||| || | | ||| | || ||| Sbjct 1092157 AAATATAC-CATTTGGA-GGTGTTTGACCAAGAAAGATAATAGTTAACTCTAGCAGCTCC 1092100 Query 12623 CGGTAGTCTTCCCTTGGTTGAT-TTGAATCAAGTTGCTTTTGGATAAAG-TGATT--AAT 12678 ||||| || | ||||||| ||| | || ||| ||| ||| || ||| || Sbjct 1092099 TTATAGTCATCTCGGGGTTGATATTGTTTTAA-TTGATTT---ATACAGAATATTAAAAG 1092044 Query 12679 GTCATCAATATGATTTTGTATTTTTTCTTGCACATACGAATCTT-CAATCCCATTAGAAT 12737 ||||| | |||||||| | || ||| | | ||||| |||||| || ||| Sbjct 1092043 TTCATCCTTTAAATTTTGTAATGATTGAAAGACAAAAGTATCTTCCAATCCAATATGAAA 1091984 Query 12738 ATTGACTTATATCAATTTCGCCCCAGCTCTCTCGAAATCTTTTAAATAAAGGTACATCAG 12797 |||| | | || ||| | ||| | | | |||| | |||||| | |||||||| | Sbjct 1091983 ATTG-TTGACATTAATGTTAGGCCAACATTTTTGAAAACGTTTAAAAATCGGTACATCTG 1091925 Query 12798 GACCTGAGGTTGTAGGTATTTTAAGTTCAAAAACACCCCTGAGGATAAGTTCAAATATGT 12857 | | || | || || || | ||||||| ||| || | | || ||||| ||| | Sbjct 1091924 GGGCAGATGCAATATCAATCTTTATTTCAAAAGCACTTCTTAATACAACTTCAAGTATAT 1091865 Query 12858 GATGCCTGCAAGGCAAATA 12876 | || ||||| || ||||| Sbjct 1091864 GGTGTCTGCACGGTAAATA 1091846 >seq412 Length=740082 Score = 91.5 bits (100), Expect = 2e-14 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 13938 ATACAATGGTCTTTTCTTTTGGTTGGTATTTGAGCTTTTTGCCAAAATACTTTAACTTCA 13997 |||||||| | || | || | || || |||||||||||||||||| | |||| || Sbjct 85149 ATACAATGACGTATTTCTCTGTTCGGAATACGAGCTTTTTGCCAAAATATTATAACCTCT 85208 Query 13998 TCTATACAGATTTCAGCACTTTCACGTAATTTAAATTTGAGAATACGTATATGATAGAAA 14057 ||||| | | |||||| || |||| || ||||||| ||| |||| || || Sbjct 85209 TCTATGACTAATCGAGCACTATCTCGTAGGTTCAATTTGACTTCACGCATATTATGAAAT 85268 Query 14058 AAGATTTTTAACACTTGTAACTTTGAAGGCAATTTATTACCGATAATTTGA-GTGTCAAC 14116 || | ||| |||||| |||||||| |||||| ||| | || ||| |||| | Sbjct 85269 AAAACCCTTAGAACTTGTTTATTTGAAGGTAATTTACAACCAAAAAGCTGATGTGT-AGT 85327 Query 14117 ATCACCAATTAAATAAATATTTTGACGTAAAATTATT 14153 || ||||||||||||||||| ||| ||| | ||| Sbjct 85328 ATGTTTAATTAAATAAATATTTTCACGCAAATTAATT 85364 >seq128 Length=864156 Score = 89.7 bits (98), Expect = 7e-14 Identities = 208/310 (67%), Gaps = 18/310 (6%) Strand=Plus/Plus Query 12233 TCATCAAAGAATGCCATAGCTACAGTTTCTGGGTTTAAATACCACAAATGCATGCTAAAT 12292 ||||||||||| | | || ||| ||| |||||||||||||||| ||| ||| Sbjct 62530 TCATCAAAGAAAGATAATGCAGCAGCCTCTTCAGTTAAATACCACAAATGGTTGCATAAT 62589 Query 12293 TTTTTCAATGCCACTTCAGATATTTTAGCATCTGTCGATTGATAATCA-ATAAGTTCCT- 12350 |||| | || ||| |||||||| ||| || | | | ||| |||| ||| | Sbjct 62590 TTTTGAATTGATACTCTAGATATTTC----TCTATCAAATACT--TCATATAATTTCATA 62643 Query 12351 ----TTAAAAATGATAAATCATTATTTGGAGCTTCAGATGCGAGAGGACAAGTGAACCAT 12406 ||| |||| ||| || | |||||| | | | || | |||||||| ||||| Sbjct 62644 TCTTTTATAAATTGTAAGTCTTGATTTGGGGACTTATTTGGCAATGGACAAGTAAACCAA 62703 Query 12407 GCTTTGATATACACTGTAGCAATAAAAACACAAATTTCAGAAACGGATTTGATTAATTTC 12466 ||||||| || | || ||||||||||||||||||| | | || || |||| Sbjct 62704 GCTTTGACGTAACATTTAATAATAAAAACACAAATTTCACCGATTGCTT---TTTTTTTC 62760 Query 12467 A---CCGTCATTTTGAATTGTTTACGAAATAAAAATATTTTTATAGTATATATGGCTTTT 12523 | | | || ||| |||| | | ||| ||||||||||||| ||| || ||| | Sbjct 62761 AAGTCGGAAATATTGTATTGGCTTCTAAACAAAAATATTTTTAAGCAATAAATTGCTCGT 62820 Query 12524 GCCATCCACC 12533 |||||||||| Sbjct 62821 GCCATCCACC 62830 >seq537 Length=105805 Score = 86.0 bits (94), Expect = 8e-13 Identities = 211/313 (67%), Gaps = 23/313 (7%) Strand=Plus/Minus Query 12233 TCATCAAAGAATGCCATAGCTACAGTTTCTGGGTTTAAATACCACAAATGCATGCTAAAT 12292 ||||||||||| | | || ||| ||| |||||||||||||||| ||| ||| Sbjct 57413 TCATCAAAGAAAGATAATGCAGCAGCCTCTTCAGTTAAATACCACAAATGGTTGCATAAT 57354 Query 12293 TTTTTCAATGCCACTTCAGATATTTTAGCATCTGTCGATTGATAA-TCA-ATAAGTTCCT 12350 |||| | || ||| |||||||| ||| || | ||| ||| |||| ||| | Sbjct 57353 TTTTGAATTGATACTCTAGATATTTC----TCTATCAA---ATACCTCATATAATTTCAT 57301 Query 12351 -----TTA-AAAATGATAAATCATTATTTGGAGCTTCAGATGCGAGAGGACAAGTGAACC 12404 ||| ||||| ||| || | |||||| | | | || | |||||||| |||| Sbjct 57300 ATCTTTTATAAAATTGTAAGTCTTGATTTGGGGACTTATTTGGCAATGGACAAGTAAACC 57241 Query 12405 ATGCTTTGATATACACTGTAGCAATAAAAACACAAATTTCAGAAACGGATTTGATTAATT 12464 | ||||||| || | || |||||||||||||||||| || |||| || || Sbjct 57240 AAGCTTTGACGTAACATTTAATAATAAAAACACAAATTTC----ACCGATTGCTTTTTTT 57185 Query 12465 -TCA---CCGTCATTTTGAATTGTTTACGAAATAAAAATATTTTTATAGTATATATGGCT 12520 ||| | | || ||| |||| | | ||| ||||||||||||| ||| || ||| Sbjct 57184 GTCAAGTCGGAAATATTGTATTGGCTTCTAAACAAAAATATTTTTAAGCAATAAATTGCT 57125 Query 12521 TTTGCCATCCACC 12533 ||||||||||| Sbjct 57124 CGTGCCATCCACC 57112 >seq149 Length=865735 Score = 86.0 bits (94), Expect = 8e-13 Identities = 318/484 (66%), Gaps = 16/484 (3%) Strand=Plus/Minus Query 12401 AACCATGCTTTGATATACACTGTAGCAATAAAAACACAAATTTCA-GAAACGGATTTGAT 12459 |||||| ||| ||||| | | | ||||||| ||| | ||| | || | ||| | Sbjct 697603 AACCATTGTTTTATATATATACGAACTATAAAAATACATAAGTCACGTAAAGCATTATTT 697544 Query 12460 TAATTTCACCGTCATTTTGAATTGTTTACGAAATAAAAATATTTTTATAGTATATATGGC 12519 | ||| | || | ||| |||| ||||||||||||||||||||||||| ||| || || Sbjct 697543 TCTTTTAAA-GTTAATTTAAATTCGTTACGAAATAAAAATATTTTTATAGAATAAATAGC 697485 Query 12520 TTTTGCCATCCACCTAGCGTGGTGGAATGCACCCGG--TTTTCGAAATTTTACTTAACTG 12577 ||||| |||||| | |||||| || | || || || ||| ||| | ||| | || Sbjct 697484 TTTTGACATCCATCGAGCGTGATGTATTGGCCCAGGAACTTTGAAAAATATAC-CATTTG 697426 Query 12578 CAGGGAACTTTACCAATAAATATCTGAACAAGCTCCAAAAGTTCCCGGTAGTCTTCCCTT 12637 | || |||||||| ||| || | | ||| | || ||| ||||| || | Sbjct 697425 GA-GGTGTTTTACCAAGAAAGATAATATTTAACTCTAGCAGCTCCTTATAGTCATCTCGG 697367 Query 12638 GGTTGAT-TTGAATCAAGTTGCTTTTGGATAAAG-TGATT--AATGTCATCAATATGATT 12693 ||||||| ||| | || ||| ||| ||| || ||| || ||||| | ||| Sbjct 697366 GGTTGATATTGTTTTAA-TTGATTT---ATACAGAATATTAAAAGTTCATCCTTTAAATT 697311 Query 12694 TTGTATTTTTTCTTGCACATACGAATCTT-CAATCCCATTAGAATATTGACTTATATCAA 12752 ||||| | || ||| | | ||||| |||||| || ||| |||| | | || || Sbjct 697310 TTGTAATGATTGAAAGACAAAAGTATCTTCCAATCCAATATGAAAATTG-TTGACATTAA 697252 Query 12753 TTTCGCCCCAGCTCTCTCGAAATCTTTTAAATAAAGGTACATCAGGACCTGAGGTTGTAG 12812 | | ||| | | | ||| | |||||| | |||||||| || | || | || Sbjct 697251 TGTTAGGCCAACATTTTTTAAAACATTTAAAAATCGGTACATCTGGGGCAGATGCAATAT 697192 Query 12813 GTATTTTAAGTTCAAAAACACCCCTGAGGATAAGTTCAAATATGTGATGCCTGCAAGGCA 12872 || || | ||||||| ||| || | | || ||||| ||| || || ||||| || | Sbjct 697191 CAATCTTTATTTCAAAAGCACTTCTTAATACAACTTCAAGTATATGGTGTCTGCACGGTA 697132 Query 12873 AATA 12876 |||| Sbjct 697131 AATA 697128 >seq405 Length=314643 Score = 82.4 bits (90), Expect = 1e-11 Identities = 192/281 (68%), Gaps = 9/281 (3%) Strand=Plus/Plus Query 12749 TCAATTTCGCCCCAGCTCTCTCGAAATCTTTTAAATAAAGGTACATCAGGACCTGAGGT- 12807 ||||||||| |||| | | | ||| ||||||| | ||| ||||||||||| || Sbjct 111343 TCAATTTCGGGCCAGGCTTGTTGGAATTTTTTAAAAATAGGAACATCAGGACCAATAGTA 111402 Query 12808 --TGTAGGTATTTTAAGTTCAAAAACACCCCTGAGGATAAGTTCAAATATGTGATGCCTG 12865 | | || ||||| ||||||||||| || || | | ||| |||| || |||| Sbjct 111403 TTTATTTTTAATTTAATTTCAAAAACACTTCTTAGCACTAATTCGTATATATGTCGCCTA 111462 Query 12866 CAAGGCAAATACAATAGttttttttCAAGCAACCGTTCCAGTGAAACTGCA-GCTCC-TT 12923 ||||| ||||| || || ||| | | | || |||||| | | | | || || || || Sbjct 111463 CAAGGTAAATATAAAAGATTTCGTCCTATCAGTTGTTCCAAT-ATAATACAGGCACCATT 111521 Query 12924 TACTTGATCCTAGATTTGCAGCAGTAGTATCACAGCATAGAGCTT-TAATAAAGTCTGGA 12982 || || || | |||| || || |||||||| |||| ||||| || | | | || Sbjct 111522 TAACCGACCCGTG-TTTGATGCCGTCGTATCACAACATAAAGCTTGTACTTTA-TTTGTT 111579 Query 12983 ATTCCCCAATCATTAATAGCGTCAAACATTGCATCAGCTTG 13023 | ||||||||||| ||| ||||| || |||| ||||| Sbjct 111580 ACACCCCAATCATTTATAATATCAAATATGGCATTTGCTTG 111620 >seq245 Length=324433 Score = 80.6 bits (88), Expect = 3e-11 Identities = 68/84 (81%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 12472 CATTTTGAATTGTTTACGAAATAAAAATATTTTTATAGTATATATGGCTTTTGCCATCCA 12531 |||||||||||| |||||||| | |||||||||| |||||| || || |||||||| Sbjct 313812 CATTTTGAATTGATTACGAAAAATGAATATTTTTAGGCAATATATTGCCTTCGCCATCCA 313871 Query 12532 CCTAGCGTGGTGGAATGCACCCGG 12555 |||||| || ||| | ||||| || Sbjct 313872 CCTAGCATGATGGGAAGCACCTGG 313895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 63288087593825