Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_007051.1
Length=41318
Score E
Sequences producing significant alignments: (Bits) Value
seq2740 282 1e-71
>seq2740
Length=4841
Score = 282 bits (312), Expect = 1e-71
Identities = 393/547 (72%), Gaps = 9/547 (2%)
Strand=Plus/Minus
Query 21233 TGAAACATATCTATTCAAACCATATTAAAGGTAACAAGATTACAGCACCAAAACCTAGTA 21292
||||| |||| |||||||| || ||| |||||| || | |||| |||| | ||||
Sbjct 1089 TGAAAGATATTTATTCAAAACACATTCAAGGTAGTAAATTAACAGGTAAAAAAGCGAGTA 1030
Query 21293 TTCAAGGTGTGGTCATCCACAATGATTATGGTAGTATGACACCTAGTCAATACTTACCAT 21352
| |||| | ||||| ||||||||||||||| |||||||||| |||||| |||||||
Sbjct 1029 TAGCAGGTATTGTCATTCACAATGATTATGGTTCAATGACACCTAATCAATATTTACCAT 970
Query 21353 GGTTATATGCACGTGAGAATAA--CGGTACACACGTTAACGGTTGGGCTAGTGTTTATGC 21410
|| |||| |||| ||||| || ||| || || ||||| || |||||| |||||||
Sbjct 969 GGCTATA--CACGAGAGAACAAAACGGAACGCATGTTAATGGATGGGCTTCAGTTTATGT 912
Query 21411 AAATAGAAACGAAGTGCTTTGGTATCATCCGACAGACTACGTAGAGTGGCATTGTGGTAA 21470
||| | | | || ||||||||||| || ||||| || ||||||||||||||||||||
Sbjct 911 AAACAAAGATGAGACACTTTGGTATCACCCAACAGATTATGTAGAGTGGCATTGTGGTAA 852
Query 21471 TCAATGGGCAAATGCTAACTTAATCGGATTTGAAGTGTGTGAGTCGTATCCTGGTAGAAT 21530
| | ||||| ||| ||| | |||||||||||| | | | || | || | || |
Sbjct 851 TAACTGGGCTAATAGTAATCTGATCGGATTTGAAATTACTCAATCACA-CCCAGCAGCAG 793
Query 21531 CTCGGACAAAT----TATTCTTAGAAAATGAAGAAGCGACATTGAAAGTAGCTGCGGATG 21586
| ||| || ||| | ||||||||| || ||||| ||||||| || | ||
Sbjct 792 GTTTAACAGATGCCCAGTTCAAATTAAATGAAGAGGCAACATTTAAAGTAGTAGCAGCTG 733
Query 21587 TGATGAAGTCGTACGGATTACCAGTTAATCGCAACACTGTACGTCTGCATAACGAATTCT 21646
| |||||||| || || |||||||||||||| || || ||| || | | | |
Sbjct 732 TCATGAAGTCTTATGGCAAACCAGTTAATCGCACGACAGTTAATCTTCACAGACAGTATT 673
Query 21647 TCGGAACTTCTTGTCCACATCGTTCGTGGGACTTGCATGTTGGCAAAGGTGAGCCTTACA 21706
|||| || |||||||| |||||||| ||||| |||||||||| ||| | || | |
Sbjct 672 TCGGCACATCTTGTCCTCATCGTTCTTGGGATATGCATGTTGGAAAAAACGCACCAGATA 613
Query 21707 CAACTACTAATATTAATAAAATGAAAGACTACTTCATCAAACGCATCAAACATTATTATG 21766
| ||||| |||||| | ||||| ||||| || || || |||||||||||
Sbjct 612 CGTTAGCTAATCGTAATAAGTTAAAAGATTACTTTATTTCTCGTATTAAACATTATTACA 553
Query 21767 ACGGTGG 21773
|||||||
Sbjct 552 ACGGTGG 546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132058470288000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |