Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_007051.1 Length=41318 Score E Sequences producing significant alignments: (Bits) Value seq2740 282 1e-71 >seq2740 Length=4841 Score = 282 bits (312), Expect = 1e-71 Identities = 393/547 (72%), Gaps = 9/547 (2%) Strand=Plus/Minus Query 21233 TGAAACATATCTATTCAAACCATATTAAAGGTAACAAGATTACAGCACCAAAACCTAGTA 21292 ||||| |||| |||||||| || ||| |||||| || | |||| |||| | |||| Sbjct 1089 TGAAAGATATTTATTCAAAACACATTCAAGGTAGTAAATTAACAGGTAAAAAAGCGAGTA 1030 Query 21293 TTCAAGGTGTGGTCATCCACAATGATTATGGTAGTATGACACCTAGTCAATACTTACCAT 21352 | |||| | ||||| ||||||||||||||| |||||||||| |||||| ||||||| Sbjct 1029 TAGCAGGTATTGTCATTCACAATGATTATGGTTCAATGACACCTAATCAATATTTACCAT 970 Query 21353 GGTTATATGCACGTGAGAATAA--CGGTACACACGTTAACGGTTGGGCTAGTGTTTATGC 21410 || |||| |||| ||||| || ||| || || ||||| || |||||| ||||||| Sbjct 969 GGCTATA--CACGAGAGAACAAAACGGAACGCATGTTAATGGATGGGCTTCAGTTTATGT 912 Query 21411 AAATAGAAACGAAGTGCTTTGGTATCATCCGACAGACTACGTAGAGTGGCATTGTGGTAA 21470 ||| | | | || ||||||||||| || ||||| || |||||||||||||||||||| Sbjct 911 AAACAAAGATGAGACACTTTGGTATCACCCAACAGATTATGTAGAGTGGCATTGTGGTAA 852 Query 21471 TCAATGGGCAAATGCTAACTTAATCGGATTTGAAGTGTGTGAGTCGTATCCTGGTAGAAT 21530 | | ||||| ||| ||| | |||||||||||| | | | || | || | || | Sbjct 851 TAACTGGGCTAATAGTAATCTGATCGGATTTGAAATTACTCAATCACA-CCCAGCAGCAG 793 Query 21531 CTCGGACAAAT----TATTCTTAGAAAATGAAGAAGCGACATTGAAAGTAGCTGCGGATG 21586 | ||| || ||| | ||||||||| || ||||| ||||||| || | || Sbjct 792 GTTTAACAGATGCCCAGTTCAAATTAAATGAAGAGGCAACATTTAAAGTAGTAGCAGCTG 733 Query 21587 TGATGAAGTCGTACGGATTACCAGTTAATCGCAACACTGTACGTCTGCATAACGAATTCT 21646 | |||||||| || || |||||||||||||| || || ||| || | | | | Sbjct 732 TCATGAAGTCTTATGGCAAACCAGTTAATCGCACGACAGTTAATCTTCACAGACAGTATT 673 Query 21647 TCGGAACTTCTTGTCCACATCGTTCGTGGGACTTGCATGTTGGCAAAGGTGAGCCTTACA 21706 |||| || |||||||| |||||||| ||||| |||||||||| ||| | || | | Sbjct 672 TCGGCACATCTTGTCCTCATCGTTCTTGGGATATGCATGTTGGAAAAAACGCACCAGATA 613 Query 21707 CAACTACTAATATTAATAAAATGAAAGACTACTTCATCAAACGCATCAAACATTATTATG 21766 | ||||| |||||| | ||||| ||||| || || || ||||||||||| Sbjct 612 CGTTAGCTAATCGTAATAAGTTAAAAGATTACTTTATTTCTCGTATTAAACATTATTACA 553 Query 21767 ACGGTGG 21773 ||||||| Sbjct 552 ACGGTGG 546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132058470288000