Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_007055.1 Length=43681 Score E Sequences producing significant alignments: (Bits) Value seq2740 140 9e-29 >seq2740 Length=4841 Score = 140 bits (154), Expect = 9e-29 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 16393 TTTGCAGATTATGCGGAGTATTTCGAGTCACAAAGCGGTGGCGCAATCAGAAATGGTACC 16452 |||| || ||||| |||||||||||||||||||| ||| || || ||| |||| Sbjct 4321 TTTGGTGACTATGCAGAGTATTTCGAGTCACAAAGTGGTCAAGCTATTCCAAACGGTATA 4262 Query 16453 ATTGTCACGTTAGAGGGTCGTTATATTCGAAAATGCCAAGAAAATGATGTGCCACTAGGC 16512 || || || ||||| || ||||||| ||||| |||| ||||| |||| | ||| Sbjct 4261 ATCGTAACTTTAGATGGGCGTTATACCAGAAAAGCACAAGTTAATGACAAGCCAATTGGC 4202 Query 16513 GTTGTATCTGGGACTGCAGGAATTATCTTAGGTGATCAAACTTTCCATCATAAAGATAGA 16572 ||| ||||||| || || || || | |||||||| || |||||||||||||| ||| Sbjct 4201 GTTATATCTGGTACAGCTGGGGTTGTGTTAGGTGACCAGTTATTCCATCATAAAGACAGA 4142 Query 16573 TTTGAACGTGATGAATTTGGTGTTATTCTAACTGAAGAACAA 16614 ||| | |||||||| || ||| | |||||||| ||||| Sbjct 4141 TTTATAAAAGATGAATTCGGAGTTGTGGTAACTGAACAACAA 4100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139617921966550