Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_007055.1
Length=43681
Score E
Sequences producing significant alignments: (Bits) Value
seq2740 140 9e-29
>seq2740
Length=4841
Score = 140 bits (154), Expect = 9e-29
Identities = 164/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 16393 TTTGCAGATTATGCGGAGTATTTCGAGTCACAAAGCGGTGGCGCAATCAGAAATGGTACC 16452
|||| || ||||| |||||||||||||||||||| ||| || || ||| ||||
Sbjct 4321 TTTGGTGACTATGCAGAGTATTTCGAGTCACAAAGTGGTCAAGCTATTCCAAACGGTATA 4262
Query 16453 ATTGTCACGTTAGAGGGTCGTTATATTCGAAAATGCCAAGAAAATGATGTGCCACTAGGC 16512
|| || || ||||| || ||||||| ||||| |||| ||||| |||| | |||
Sbjct 4261 ATCGTAACTTTAGATGGGCGTTATACCAGAAAAGCACAAGTTAATGACAAGCCAATTGGC 4202
Query 16513 GTTGTATCTGGGACTGCAGGAATTATCTTAGGTGATCAAACTTTCCATCATAAAGATAGA 16572
||| ||||||| || || || || | |||||||| || |||||||||||||| |||
Sbjct 4201 GTTATATCTGGTACAGCTGGGGTTGTGTTAGGTGACCAGTTATTCCATCATAAAGACAGA 4142
Query 16573 TTTGAACGTGATGAATTTGGTGTTATTCTAACTGAAGAACAA 16614
||| | |||||||| || ||| | |||||||| |||||
Sbjct 4141 TTTATAAAAGATGAATTCGGAGTTGTGGTAACTGAACAACAA 4100
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 139617921966550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |