Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq430 114 3e-20
seq35 84.2 6e-11
>seq430
Length=650307
Score = 114 bits (126), Expect = 3e-20
Identities = 231/340 (68%), Gaps = 2/340 (1%)
Strand=Plus/Minus
Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAAC 111547
|||||| | ||||| ||||| |||||||||||||| || | |||||| || || |
Sbjct 88325 AGGTGACTTGGGACCTGTTTATGGATTTCAATGGCGACATTATGGTGCTGAGTATGTAGA 88266
Query 111548 CATGCACGACTCAT-ATGATTCACAGGGAACTGATCAATTACAGAATGTCATTGATCAAA 111606
|||| ||| || | | | | || | ||||||| | || || ||||| || ||
Sbjct 88265 TGTGCAT-ACTGATTACTCTGGAAAAGGCATTGATCAACTTCAAAACGTCATCAATACAA 88207
Query 111607 TTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTGG 111666
| || | ||||| | | || || |||||| |||||||| ||| || |
Sbjct 88206 TCAAAACTAACCCTGACGATAGGCGAATGCTTATGATCGCATGGAATCCATGTGATGTAC 88147
Query 111667 AAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGGGATGC 111726
|||||||| | ||||| |||||| | || ||||||| ||| ||| || |
Sbjct 88146 CTAAAATGGCCTTACCACCGTGTCATTGTCTGGTACAGTTTTTTGTCGCCGATGGCTATC 88087
Query 111727 TTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTG 111786
| || || |||||||| || ||||| || || || ||||| || || || ||||||||||
Sbjct 88086 TGTCGTGTCAAATGTACCAACGATCAGCAGACATGGGTCTAGGAGTACCCTTTAATATTG 88027
Query 111787 CAAGTTACGCACTACTTACTTGCTTAATCGCTCATTTTAC 111826
| ||||| || ||||||| | | || || ||| ||||
Sbjct 88026 CCAGTTATTCATTACTTACATATATGATAGCCCATGTTAC 87987
>seq35
Length=1961283
Score = 84.2 bits (92), Expect = 6e-11
Identities = 133/190 (70%), Gaps = 3/190 (2%)
Strand=Plus/Plus
Query 22435 AAGAATAAGGCAGATTGGGCGCTGAAATGGATGA---ACAATGAACGTTCATTCGCGGAA 22491
|| || |||||||||||||| || |||||||| | | | | || | || | |||
Sbjct 1196943 AAAAAGAAGGCAGATTGGGCTCTTAAATGGATCAGTGATAGTAAAGCAACTTTTGGTGAA 1197002
Query 22492 CGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATC 22551
| | |||||||||||| |||||||| || || || |||||| ||| |||| |
Sbjct 1197003 AGGTTAGTTGCATTTGCTGCAGTTGAAGGTATATTTTTCTCTGGAAGTTTTGCTGCATTA 1197062
Query 22552 TTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGC 22611
|||||| | || ||| | | | | ||||| ||| |||| ||| |||||| | |||
Sbjct 1197063 TTTTGGTTGAAGAAAAGAGGATTAATGCCAGGTTTAACTTTTAGCAATGAGCTGATTTCA 1197122
Query 22612 CGAGATGAGG 22621
|||||||||
Sbjct 1197123 AGAGATGAGG 1197132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1302954071209350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |