Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_007734.1 Length=40867 Score E Sequences producing significant alignments: (Bits) Value seq4202 86.0 2e-12 >seq4202 Length=4526 Score = 86.0 bits (94), Expect = 2e-12 Identities = 138/196 (70%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 29497 ATAGCTTTTGAAATCGGACTAT-CAATAGAGTCGGCTAGAGCACTATTGGAACGTTTTGA 29555 |||||||| ||| | || |||| ||| ||| || | ||||| | || | ||||| Sbjct 27 ATAGCTTTCGAATTAGG-CTATTCAACAGAATCAATAAATGCACTGATAGATAGATTTGA 85 Query 29556 AAACCATCATAAATTAATTAAATATAACAAACTGACAAGAGAAATTGCTATAAAAAATTG 29615 ||| ||||| |||||| | | || || | | || ||||||| |||||||||||||| Sbjct 86 AAATCATCACAAATTAGTACATTACAATTCAGTTACTCGAGAAATGGCTATAAAAAATTG 145 Query 29616 GGGCAAATACAACCTGAATAGAGGCGGGAAACCAATTGAAGATTGTCTTAAAAGAGAAAT 29675 ||| | ||||| | || | || || ||||| | ||||||||| ||| | |||| | Sbjct 146 GGGTAGGTACAATTTCAACAAAGCAGGTAAACCTGTAGAAGATTGTGTTAGATCAGAACT 205 Query 29676 TGATAAAGTGAAAGAT 29691 | || ||| || ||| Sbjct 206 TTCTAGAGTAAAGGAT 221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130615680314650