Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_007734.1
Length=40867
Score E
Sequences producing significant alignments: (Bits) Value
seq4202 86.0 2e-12
>seq4202
Length=4526
Score = 86.0 bits (94), Expect = 2e-12
Identities = 138/196 (70%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 29497 ATAGCTTTTGAAATCGGACTAT-CAATAGAGTCGGCTAGAGCACTATTGGAACGTTTTGA 29555
|||||||| ||| | || |||| ||| ||| || | ||||| | || | |||||
Sbjct 27 ATAGCTTTCGAATTAGG-CTATTCAACAGAATCAATAAATGCACTGATAGATAGATTTGA 85
Query 29556 AAACCATCATAAATTAATTAAATATAACAAACTGACAAGAGAAATTGCTATAAAAAATTG 29615
||| ||||| |||||| | | || || | | || ||||||| ||||||||||||||
Sbjct 86 AAATCATCACAAATTAGTACATTACAATTCAGTTACTCGAGAAATGGCTATAAAAAATTG 145
Query 29616 GGGCAAATACAACCTGAATAGAGGCGGGAAACCAATTGAAGATTGTCTTAAAAGAGAAAT 29675
||| | ||||| | || | || || ||||| | ||||||||| ||| | |||| |
Sbjct 146 GGGTAGGTACAATTTCAACAAAGCAGGTAAACCTGTAGAAGATTGTGTTAGATCAGAACT 205
Query 29676 TGATAAAGTGAAAGAT 29691
| || ||| || |||
Sbjct 206 TTCTAGAGTAAAGGAT 221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130615680314650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |