Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq35 176 5e-39
seq1089 138 1e-27
seq160 138 1e-27
seq576 134 2e-26
seq614 132 5e-26
seq349 131 2e-25
seq239 131 2e-25
seq631 123 3e-23
seq1107 120 3e-22
seq1042 120 3e-22
seq428 118 1e-21
seq600 114 1e-20
seq544 114 1e-20
seq59 114 1e-20
seq156 95.1 1e-14
seq86 87.8 2e-12
>seq35
Length=1961283
Score = 176 bits (194), Expect = 5e-39
Identities = 171/220 (78%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 93116 TCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTG 93175
|| |||| ||| |||| ||||||||| || ||||||||||| | | ||||| ||||||
Sbjct 1197130 TCATCTCTTGAAATCAGCTCATTGCTAAAAGTTAAACCTGGCATTAATCCTCTTTTCTTC 1197071
Query 93176 AGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCC 93235
| |||||||| || ||||||||| ||||| |||||||||||||| || || ||||||||
Sbjct 1197070 AACCAAAATAATGCAGCAAAACTTCCAGAGAAAAATATACCTTCAACTGCAGCAAATGCA 1197011
Query 93236 ACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCT 93295
|| | | ||| ||||| |||| | || ||||||||||| | ||||||||| ||
Sbjct 1197010 ACTAACCTTTCACCAAAAGTTGCTTTACTATCACTGATCCATTTAAGAGCCCAATCTGCC 1196951
Query 93296 TTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATA 93335
|| || || | ||| || | ||||| ||||| |||||||
Sbjct 1196950 TTCTTTTTTACACACGGCATGGTTTCAATAGCATTAAATA 1196911
Score = 143 bits (158), Expect = 3e-29
Identities = 150/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 93356 TCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCA 93415
||| | || ||||| || ||||| | ||||||||| ||||| | ||| |||||
Sbjct 1196831 TCTTGAATATATGTGTCAATTAATAAGCTATACATTTCTGAATGTATATTTTCCATCATT 1196772
Query 93416 ATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCT 93475
|||||||| || || ||||||||||| || || | || ||||||||||| ||||| ||
Sbjct 1196771 ATTTGGAACCCATAAAAACATCTAGCCTCAGTTACTTGAACTTCTTGAGAGAATCTTTCA 1196712
Query 93476 ACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATA 93535
|| |||||||||||||| || ||||| || || |||||||| || |||| || ||||
Sbjct 1196711 ACAAGATTTTCATTGACAATGCCATCTGAAGCAGCAAAAAATGCTAATACGTGAGATATA 1196652
Query 93536 AAATGTTTCTCATCATC 93552
|| || |||||||||
Sbjct 1196651 AAGTGACGCTCATCATC 1196635
Score = 107 bits (118), Expect = 2e-18
Identities = 94/117 (80%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 93589 ATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTC 93648
|| ||||||||| ||| ||||||| || |||||| |||||||||||| |||| |||||
Sbjct 1196533 ATTGACTTCTTCTACATTCCAAAAAGAAGCTTCTTGTTTTTTGTACATGGCCCAAATGTC 1196474
Query 93649 TTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTC 93705
| |||| ||| || |||||||||||||| | || |||||||| ||||| || ||
Sbjct 1196473 GTCATATATAATAGGGAATATGACAAAACGTCTCGGATTATCTTTCAGTAAGGGTTC 1196417
>seq1089
Length=106908
Score = 138 bits (152), Expect = 1e-27
Identities = 85/90 (94%), Gaps = 2/90 (2%)
Strand=Plus/Minus
Query 126263 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGA 126320
|||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||
Sbjct 27569 ACAGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAAACGGGA 27510
Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAAT 126350
||||||||||||||||||||||||||||||
Sbjct 27509 GCGTGGGTTCGAACCCCACACCTGACAAAT 27480
>seq160
Length=461137
Score = 138 bits (152), Expect = 1e-27
Identities = 96/107 (90%), Gaps = 4/107 (4%)
Strand=Plus/Plus
Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAG 126321
||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||
Sbjct 450764 CAGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAAACGGGAG 450823
Query 126322 CGTGGGTTCGAACCCCACACCTGACAAA--TTATTATTGGAATTTTT 126366
|||||||||||||||||||||||||||| ||| | || | ||||||
Sbjct 450824 CGTGGGTTCGAACCCCACACCTGACAAATCTTAATTTTTGCATTTTT 450870
>seq576
Length=149404
Score = 134 bits (148), Expect = 2e-26
Identities = 83/88 (94%), Gaps = 2/88 (2%)
Strand=Plus/Minus
Query 126263 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGA 126320
|||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||
Sbjct 125995 ACAGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAAACGGGA 125936
Query 126321 GCGTGGGTTCGAACCCCACACCTGACAA 126348
||||||||||||||||||||||||||||
Sbjct 125935 GCGTGGGTTCGAACCCCACACCTGACAA 125908
>seq614
Length=227230
Score = 132 bits (146), Expect = 5e-26
Identities = 82/87 (94%), Gaps = 2/87 (2%)
Strand=Plus/Plus
Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAG 126321
||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||
Sbjct 12947 CAGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAAACGGGAG 13006
Query 126322 CGTGGGTTCGAACCCCACACCTGACAA 126348
|||||||||||||||||||||||||||
Sbjct 13007 CGTGGGTTCGAACCCCACACCTGACAA 13033
>seq349
Length=897341
Score = 131 bits (144), Expect = 2e-25
Identities = 84/91 (92%), Gaps = 2/91 (2%)
Strand=Plus/Plus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323
||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||
Sbjct 493888 GTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAAACGGGAGCG 493947
Query 126324 TGGGTTCGAACCCCACACCTGACAAATTATT 126354
||||||||||||||||||||||||| || ||
Sbjct 493948 TGGGTTCGAACCCCACACCTGACAATTTTTT 493978
>seq239
Length=568661
Score = 131 bits (144), Expect = 2e-25
Identities = 83/89 (93%), Gaps = 2/89 (2%)
Strand=Plus/Plus
Query 126262 TACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGG 126319
|| |||||||||||||||| |||||||||||||||||||||| |||||||||| ||||
Sbjct 85447 TATAGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAAACGGG 85506
Query 126320 AGCGTGGGTTCGAACCCCACACCTGACAA 126348
|||||||||||||||||||||||||||||
Sbjct 85507 AGCGTGGGTTCGAACCCCACACCTGACAA 85535
>seq631
Length=173759
Score = 123 bits (136), Expect = 3e-23
Identities = 80/87 (92%), Gaps = 2/87 (2%)
Strand=Plus/Minus
Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAG 126321
||||||| ||||||||| |||||||||||||||||||||| |||||||||| ||||||
Sbjct 156630 CAGTCAGATTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAAACGGGAG 156571
Query 126322 CGTGGGTTCGAACCCCACACCTGACAA 126348
||||| |||||||||||||||||||||
Sbjct 156570 CGTGGATTCGAACCCCACACCTGACAA 156544
>seq1107
Length=107667
Score = 120 bits (132), Expect = 3e-22
Identities = 82/91 (90%), Gaps = 6/91 (7%)
Strand=Plus/Minus
Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAG 126321
||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||
Sbjct 1467 CAGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAAACGGGAG 1408
Query 126322 CGTGGGT----TCGAACCCCACACCTGACAA 126348
||||||| ||||||||||||||||||||
Sbjct 1407 CGTGGGTTCGATCGAACCCCACACCTGACAA 1377
>seq1042
Length=111944
Score = 120 bits (132), Expect = 3e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421
|| |||||||| ||||| | ||||||||| ||||| | |||||| || ||||||
Sbjct 80533 ATATATGTATCTATTAATAAGCTATACATTTCTGAATGTATATTCTCTATCATTATTTGG 80592
Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481
|| || || ||||||||||| || || | || |||||||||||||||| | || |||
Sbjct 80593 AACCCATAAAAACATCTAGCCTCAGTTACTTGAACTTCTTGAGAAAATCGTTTAACAAGA 80652
Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541
|||||| | ||||| |||| || || || ||||| || | ||| | |||||| ||
Sbjct 80653 TTTTCACTAACTATGCCATTTGAAGCAGCTAAAAATGCTAGTATGTAGGATATAAAGTGA 80712
Query 93542 TTCTCATCATC 93552
||| |||||
Sbjct 80713 CGCTCTTCATC 80723
>seq428
Length=165776
Score = 118 bits (130), Expect = 1e-21
Identities = 79/87 (91%), Gaps = 2/87 (2%)
Strand=Plus/Minus
Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAG 126321
||||||||||||||||| || |||| |||||||||||||| ||| |||||| ||||||
Sbjct 44348 CAGTCAGGTTGGCCGAGGGGCCTAAAGCGCCAGATTTAAGCTCTCGTTCCCAAACGGGAG 44289
Query 126322 CGTGGGTTCGAACCCCACACCTGACAA 126348
|||||||||||||||||||||||||||
Sbjct 44288 CGTGGGTTCGAACCCCACACCTGACAA 44262
Score = 118 bits (130), Expect = 1e-21
Identities = 79/87 (91%), Gaps = 2/87 (2%)
Strand=Plus/Minus
Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAG 126321
||||||||||||||||| || |||| |||||||||||||| ||| |||||| ||||||
Sbjct 56401 CAGTCAGGTTGGCCGAGGGGCCTAAAGCGCCAGATTTAAGCTCTCGTTCCCAAACGGGAG 56342
Query 126322 CGTGGGTTCGAACCCCACACCTGACAA 126348
|||||||||||||||||||||||||||
Sbjct 56341 CGTGGGTTCGAACCCCACACCTGACAA 56315
Score = 116 bits (128), Expect = 4e-21
Identities = 76/83 (92%), Gaps = 2/83 (2%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
|||||||||||||||| ||||||| |||||||||||||| |||||||||| |||||||
Sbjct 116111 AGTCAGGTTGGCCGAGGGGTCTAAAGCGCCAGATTTAAGCTCTGGTTCCCAAACGGGAGC 116052
Query 126323 GTGGGTTCGAACCCCACACCTGA 126345
|||| ||||||||||||||||||
Sbjct 116051 GTGGATTCGAACCCCACACCTGA 116029
Score = 116 bits (128), Expect = 4e-21
Identities = 76/83 (92%), Gaps = 2/83 (2%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
|||||||||||||||| ||||||| |||||||||||||| |||||||||| |||||||
Sbjct 159583 AGTCAGGTTGGCCGAGGGGTCTAAAGCGCCAGATTTAAGCTCTGGTTCCCAAACGGGAGC 159524
Query 126323 GTGGGTTCGAACCCCACACCTGA 126345
|||| ||||||||||||||||||
Sbjct 159523 GTGGATTCGAACCCCACACCTGA 159501
>seq600
Length=74603
Score = 114 bits (126), Expect = 1e-20
Identities = 78/87 (90%), Gaps = 2/87 (2%)
Strand=Plus/Plus
Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAG 126321
||||||||||||||||| || |||| |||||||||||||| ||| |||||| ||||||
Sbjct 14626 CAGTCAGGTTGGCCGAGGGGCCTAAAGCGCCAGATTTAAGCTCTCGTTCCCAAACGGGAG 14685
Query 126322 CGTGGGTTCGAACCCCACACCTGACAA 126348
|||||||||||||| ||||||||||||
Sbjct 14686 CGTGGGTTCGAACCTCACACCTGACAA 14712
>seq544
Length=176527
Score = 114 bits (126), Expect = 1e-20
Identities = 78/87 (90%), Gaps = 2/87 (2%)
Strand=Plus/Minus
Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAG 126321
||||||||||||| ||| ||||| |||| ||||||||||| |||||||||| ||||||
Sbjct 60874 CAGTCAGGTTGGCGGAGCGGTCTTAGGCACCAGATTTAAGCTCTGGTTCCCAAACGGGAG 60815
Query 126322 CGTGGGTTCGAACCCCACACCTGACAA 126348
|||||||| ||||||||||||||||||
Sbjct 60814 CGTGGGTTTGAACCCCACACCTGACAA 60788
>seq59
Length=1692180
Score = 114 bits (126), Expect = 1e-20
Identities = 78/87 (90%), Gaps = 2/87 (2%)
Strand=Plus/Plus
Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAG 126321
||||||||||| ||||| ||||||| |||||||||||||| ||||||| || |||||
Sbjct 1046631 CAGTCAGGTTGACCGAGGGGTCTAAAGCGCCAGATTTAAGCTCTGGTTTCCAAATGGGAG 1046690
Query 126322 CGTGGGTTCGAACCCCACACCTGACAA 126348
|||||||||||||||||||||||||||
Sbjct 1046691 CGTGGGTTCGAACCCCACACCTGACAA 1046717
>seq156
Length=522420
Score = 95.1 bits (104), Expect = 1e-14
Identities = 76/91 (84%), Gaps = 2/91 (2%)
Strand=Plus/Plus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323
|||||| |||||||| ||||||||||| ||||||||| |||||||||| |||||||
Sbjct 486829 GTCAGGCTGGCCGAGCTGTCTAAGGCGCAAGATTTAAGCTCTGGTTCCCAAACGGGAGCA 486888
Query 126324 TGGGTTCGAACCCCACACCTGACAAATTATT 126354
|||||| ||| |||| |||| |||| || ||
Sbjct 486889 TGGGTTTGAAACCCATACCTCACAATTTTTT 486919
>seq86
Length=815150
Score = 87.8 bits (96), Expect = 2e-12
Identities = 75/92 (82%), Gaps = 2/92 (2%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
||| |||||||||||| |||||||||| ||||||||||| ||| |||| | || | |
Sbjct 123461 AGTTAGGTTGGCCGAGCGGTCTAAGGCACCAGATTTAAGCTCTATCTCCCCTTGGGAAAC 123402
Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATT 126354
|||||| ||| |||||| ||||||||| |||
Sbjct 123401 ATGGGTTTGAATCCCACATCTGACAAATCATT 123370
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556694263817000
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