Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_008723.1
Length=44041
Score E
Sequences producing significant alignments: (Bits) Value
seq2740 111 4e-20
>seq2740
Length=4841
Score = 111 bits (122), Expect = 4e-20
Identities = 423/652 (65%), Gaps = 24/652 (4%)
Strand=Plus/Minus
Query 18186 GCAGAGTTATTTGAGTCACAAAATGGATTAGCAGTTGATTTAGGAACTATCGTTACTTTA 18245
||||||| || |||||||||| ||| ||| || || | ||||| ||||||
Sbjct 4309 GCAGAGTATTTCGAGTCACAAAGTGGTCAAGCTATTCCAAACGGTATAATCGTAACTTTA 4250
Query 18246 GACGGAGATAAAATAAGAAAAGCGCAACCTAGTGACGAGCCTATTGGTGTCATTTCTGGC 18305
|| || | | | |||||||| ||| || |||| |||| ||||| || || |||||
Sbjct 4249 GATGGGCGTTATACCAGAAAAGCACAAGTTAATGACAAGCCAATTGGCGTTATATCTGGT 4190
Query 18306 ACTGCTGCATTAGTCGCTAAC-GAAAAAACATTCCACCATAAAGATAGATTCTTAAAGAA 18364
|| |||| | || | || || | |||||| |||||||| ||||| |||| |
Sbjct 4189 ACAGCTGGGGTTGT-GTTAGGTGACCAGTTATTCCATCATAAAGACAGATTTATAAAAGA 4131
Query 18365 TGAATACGGTGTAACGATTACAAATAGAAAACAAGTTGAGTTTGTAGACGATGAGGGCAA 18424
||||| ||| || | | || | | || ||||||| ||||| | ||| || |
Sbjct 4130 TGAATTCGGAGTTGTGGTAACTGAACAACAAGAAGTTGAAATTGTAAAAGATACAGGTGA 4071
Query 18425 TGTTTCATTC--GAATGGCGTGATGTACCAGTAGAAAACCCTGATTATGACGATAGCATT 18482
|| | || |||| || ||| | ||| ||| || ||||| || ||||| | ||
Sbjct 4070 AGT--CGTTAAAGAATTACGAGATATTCCATTAGTTAATCCTGAATACGACGAAA--ATG 4015
Query 18483 AG--TTACGAATCTCGTTCAGAAAGACCTGAATGGAATGTAGTCGGATTATTAGGTCAAA 18540
| ||| | ||||| || ||||| ||||||||||| || || || |||||||
Sbjct 4014 AAGATTATTTGGCGCGTTCTGATAGACCAGAATGGAATGTCGTAGGTTTGACTGGTCAAA 3955
Query 18541 TCTACACAAACATTGAAAAAGATGTTATACCAGGTGACTATATCAATGGTAGAGCAGGTG 18600
| | ||||| ||||| || |||| | ||| ||||| || | || |||
Sbjct 3954 TATTCACAAGAATTGATAACACAGTTAAAGTCAATGATTATATAAAAGCTAATAATGGTA 3895
Query 18601 TAGGTTACAAAGATAATATAAATGGTAAAGGTAGAGTCATGAAGAT---AACTTCTGAAT 18657
| || ||||||||| | |||||| | ||||| ||| | || ||| || |
Sbjct 3894 TTGGAACAAAAGATAATGTGAATGGTTACTACAGAGTTATGGAAATCACAACGCCTTACG 3835
Query 18658 ACACTGAAGAACG---TGGCTGTGCAATAGCATTAGT--ATT--GTGGGGTGCTAA---A 18707
| |||||| || | |||| ||| | |||||| | | | || || || |
Sbjct 3834 ATACTGAAAAAGGATATGGCGTAGCAGTCATATTAGTTAAGTAGGAGGAATGACAATGGA 3775
Query 18708 TAATGGAGTTAGAAAAAGTAGGTAAACTTGATTTAAATGAAGAACCATATTTACAACCGA 18767
|||||| | | | ||| |||| |||||||||| | || || |||||| ||| |
Sbjct 3774 AAATGGAATCA-ATAAAAAAGGTTTCTTTGATTTAAAAGTTGAGCCTTATTTAAGACCAA 3716
Query 18768 TATCTAATAGAGGTATCGGTTTTTATAATCTCGATAAAAACACTGCTAAATT 18819
| ||| || ||| || |||||||||||| | || |||| || || | |||
Sbjct 3715 TCTCTGATTTAGGGATTGGTTTTTATAATTTAGACGAAAATACAGCAACATT 3664
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 140769594672550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |