Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_008920.1
Length=3403
Score E
Sequences producing significant alignments: (Bits) Value
seq1123 78.8 2e-11
seq314 78.8 2e-11
seq165 78.8 2e-11
>seq1123
Length=125858
Score = 78.8 bits (86), Expect = 2e-11
Identities = 64/78 (82%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 1767 AAAATGGAAATAGCATCCTTTGATTTTTACATTCGGGAACACTTCTCTACATGCAATGAT 1826
||||||||||| ||||||||| ||||||||| || || |||||| || ||||| | ||
Sbjct 73627 AAAATGGAAATGGCATCCTTTTTGTTTTACATTAGGAAATACTTCTTTAAATGCATTAAT 73568
Query 1827 AAATGCCATTTCGAAATC 1844
|||||||||| |||||
Sbjct 73567 TGATGCCATTTCAAAATC 73550
>seq314
Length=233009
Score = 78.8 bits (86), Expect = 2e-11
Identities = 64/78 (82%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 1767 AAAATGGAAATAGCATCCTTTGATTTTTACATTCGGGAACACTTCTCTACATGCAATGAT 1826
||||||||||| ||||||||| ||||||||| || || |||||| || ||||| | ||
Sbjct 59136 AAAATGGAAATGGCATCCTTTTTGTTTTACATTAGGAAATACTTCTTTAAATGCATTAAT 59077
Query 1827 AAATGCCATTTCGAAATC 1844
|||||||||| |||||
Sbjct 59076 TGATGCCATTTCAAAATC 59059
>seq165
Length=388029
Score = 78.8 bits (86), Expect = 2e-11
Identities = 64/78 (82%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 1767 AAAATGGAAATAGCATCCTTTGATTTTTACATTCGGGAACACTTCTCTACATGCAATGAT 1826
||||||||||| ||||||||| ||||||||| || || |||||| || ||||| | ||
Sbjct 63993 AAAATGGAAATGGCATCCTTTTTGTTTTACATTAGGAAATACTTCTTTAAATGCATTAAT 63934
Query 1827 AAATGCCATTTCGAAATC 1844
|||||||||| |||||
Sbjct 63933 TGATGCCATTTCAAAATC 63916
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 10774779721000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |