Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq430 109 5e-19
>seq430
Length=650307
Score = 109 bits (120), Expect = 5e-19
Identities = 231/342 (68%), Gaps = 2/342 (1%)
Strand=Plus/Plus
Query 20240 CCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACT 20299
||||||||||| || | |||||| || | | ||||| |||||||| ||||| || |||
Sbjct 87984 CCAGTAACATGGGCTATCATATATGTAAGTAATGAATAACTGGCAATATTAAAGGGTACT 88043
Query 20300 CCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACA 20359
|| | |||||||||| | || | || |||| ||||| || || | || || || |||
Sbjct 88044 CCTAGACCCATGTCTGCTGATCGTTGGTACATTTGACACGACAGATAGCCATCGGCGACA 88103
Query 20360 TAAAATTG-ACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTT 20418
|||| || || |||| ||||| || || | ||||| | | || || ||
Sbjct 88104 AAAAACTGTACCAGACAA-TGACACGGTGGTAAGGCCATTTTAGGTACATCACATGGATT 88162
Query 20419 CCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTA 20478
||| || ||||| |||| ||||||| || ||| |||| ||| || | | ||
Sbjct 88163 CCATGCGATCATAAGCATTCGCCTATCGTCAGGGTTAGTTTTGATTGTATTGATGACGTT 88222
Query 20479 CGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCC 20538
| ||| |||| || | || | || |||| || | | || || ||| | || ||
Sbjct 88223 TTGAAGTTGATCAATGCCTTTTCCAGAGTAATCAGTATGCACATCTACATACTCAGCACC 88282
Query 20539 AAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCC 20580
| | || | ||| || || || |||||||||||||| || ||
Sbjct 88283 ATAATGTCGCCATTGAAATCCATAAACAGGTCCCAAGTCACC 88324
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441240801947000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |