Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq430 109 5e-19 >seq430 Length=650307 Score = 109 bits (120), Expect = 5e-19 Identities = 231/342 (68%), Gaps = 2/342 (1%) Strand=Plus/Plus Query 20240 CCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACT 20299 ||||||||||| || | |||||| || | | ||||| |||||||| ||||| || ||| Sbjct 87984 CCAGTAACATGGGCTATCATATATGTAAGTAATGAATAACTGGCAATATTAAAGGGTACT 88043 Query 20300 CCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACA 20359 || | |||||||||| | || | || |||| ||||| || || | || || || ||| Sbjct 88044 CCTAGACCCATGTCTGCTGATCGTTGGTACATTTGACACGACAGATAGCCATCGGCGACA 88103 Query 20360 TAAAATTG-ACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTT 20418 |||| || || |||| ||||| || || | ||||| | | || || || Sbjct 88104 AAAAACTGTACCAGACAA-TGACACGGTGGTAAGGCCATTTTAGGTACATCACATGGATT 88162 Query 20419 CCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTA 20478 ||| || ||||| |||| ||||||| || ||| |||| ||| || | | || Sbjct 88163 CCATGCGATCATAAGCATTCGCCTATCGTCAGGGTTAGTTTTGATTGTATTGATGACGTT 88222 Query 20479 CGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCC 20538 | ||| |||| || | || | || |||| || | | || || ||| | || || Sbjct 88223 TTGAAGTTGATCAATGCCTTTTCCAGAGTAATCAGTATGCACATCTACATACTCAGCACC 88282 Query 20539 AAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCC 20580 | | || | ||| || || || |||||||||||||| || || Sbjct 88283 ATAATGTCGCCATTGAAATCCATAAACAGGTCCCAAGTCACC 88324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441240801947000