Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_009382.1 Length=38760 Score E Sequences producing significant alignments: (Bits) Value seq3309 91.5 4e-14 >seq3309 Length=43154 Score = 91.5 bits (100), Expect = 4e-14 Identities = 120/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 20688 TGGACACCCCGATCACGCGCGGGGAA-CAGACGATCAGCGAGATCACCGTGCGCAAGCCG 20746 |||||||||||||| ||| || || | || ||| | ||| ||||||||||||| Sbjct 42738 TGGACACCCCGATCCTGCGTGGCAAAACCGA-GATTAAAAGCATCGTCGTGCGCAAGCCG 42680 Query 20747 GGCGCCGGCGAGCTGCGCGGCGTGAGCCTGATGGACCTGATGCGCATGGACGTGACTGCC 20806 |||||| ||||||||| | ||||| || |||||| ||||||||||| || Sbjct 42679 CAGTCCGGCGCGCTGCGCGGTACGCGCCTGCAGGCGCTGATGGACATGGACGTGAACGCG 42620 Query 20807 CTGCACACGGTTCTGCCGCGCATCACCACGCCGACGCTGACCAC 20850 || ||| || ||||||||| | || || ||| |||||||||| Sbjct 42619 ATGATCACCGTGCTGCCGCGCGTAACTACCCCGGCGCTGACCAC 42576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123875195893700