Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_009382.1
Length=38760
Score E
Sequences producing significant alignments: (Bits) Value
seq3309 91.5 4e-14
>seq3309
Length=43154
Score = 91.5 bits (100), Expect = 4e-14
Identities = 120/164 (73%), Gaps = 2/164 (1%)
Strand=Plus/Minus
Query 20688 TGGACACCCCGATCACGCGCGGGGAA-CAGACGATCAGCGAGATCACCGTGCGCAAGCCG 20746
|||||||||||||| ||| || || | || ||| | ||| |||||||||||||
Sbjct 42738 TGGACACCCCGATCCTGCGTGGCAAAACCGA-GATTAAAAGCATCGTCGTGCGCAAGCCG 42680
Query 20747 GGCGCCGGCGAGCTGCGCGGCGTGAGCCTGATGGACCTGATGCGCATGGACGTGACTGCC 20806
|||||| ||||||||| | ||||| || |||||| ||||||||||| ||
Sbjct 42679 CAGTCCGGCGCGCTGCGCGGTACGCGCCTGCAGGCGCTGATGGACATGGACGTGAACGCG 42620
Query 20807 CTGCACACGGTTCTGCCGCGCATCACCACGCCGACGCTGACCAC 20850
|| ||| || ||||||||| | || || ||| ||||||||||
Sbjct 42619 ATGATCACCGTGCTGCCGCGCGTAACTACCCCGGCGCTGACCAC 42576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 123875195893700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |