Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_009816.1
Length=70579
Score E
Sequences producing significant alignments: (Bits) Value
seq3170 194 8e-45
>seq3170
Length=4130
Score = 194 bits (214), Expect = 8e-45
Identities = 312/433 (72%), Gaps = 19/433 (4%)
Strand=Plus/Plus
Query 60128 GAACGTGACATCAGGAACGATAACTCCTAGG-GAGAGAGTCTTAATACGGATCTTCTCGT 60186
|||||||| ||| |||| | || || | | || || || ||||| ||||| || ||||
Sbjct 17 GAACGTGATATCCGGAATAACCACACCCATGCGACAGTGTTTTAATCCGGATTTTTTCGT 76
Query 60187 CGGCGTTTTCACGCTTGGTATCCAGG-AACGCAAGGATGTCGGGGTGGTGTGCGTTCAAA 60245
|||||||||| || |||||||| ||| ||||| || || || ||||| || ||||||| |
Sbjct 77 CGGCGTTTTCGCGTTTGGTATCGAGGAAACGC-AGAATATCCGGGTGATGAGCGTTCAGA 135
Query 60246 TATACCGCCCCTGCGCCCTGCCTTGCACCCAGTTGGTTAGAGTAGGAGAAGCTATCTTCT 60305
|| |||||||| |||||||| | ||||| || ||||| | ||| |||||| ||||||
Sbjct 136 TAGACCGCCCCCGCGCCCTGACGCGCACCGAGCTGGTTGGCGTAAGAGAAGGCATCTTCC 195
Query 60306 AGAATCTTCATCACAGGGATGACTCCAGAGGCCTGACCTTCTCGA--CCCTTAATCGGAG 60363
|| |||||||| | || || || || || | |||| || |||| | ||||||||| |
Sbjct 196 AGCATCTTCATGATCGGAATAACGCCGGAAGACTGA--TTTTCGATGCGCTTAATCGGCG 253
Query 60364 CTCCTGCCTCGCGGAGGTTGG--AGAATCCAATGCCGACTCCGCCACCACGCTTAGACAG 60421
| || | || || | ||||| || || || ||| || ||||| || || || || ||
Sbjct 254 CGCCCACTTCACGAATGTTGGTCAGCAT-AAACGCC-ACACCGCCGCCGCGTTTGGAAAG 311
Query 60422 CTGGAG---AGAGTCCTGAACGATTCGACCGATGGACCCCATGGTGTCCTGAACATCGAG 60478
||| || |||| ||| ||| || |||||||| ||||| |||| | || ||
Sbjct 312 CTGCAGCGCCGAGT--TGACCGA-GCGCCCGATGGATTCCATGTTGTCTTCAATGCGCAG 368
Query 60479 GATGAAGCATGATACTGGCTTGCCTGCGTCGAGAAGCCCCGC-GTTGAGGAAGGTCGGAG 60537
| |||||| || || ||| || ||| | |||| ||| ||||| ||||| |
Sbjct 369 CAGGAAGCACGACACCAGCTCACC-GCGCTGTTTTTTGCCGCAGTTAAGGAACGTCGGCG 427
Query 60538 TTGCAGGCTGGAA 60550
| |||||||||||
Sbjct 428 TGGCAGGCTGGAA 440
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 225662180889500
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |