Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq276 156 1e-32
seq2302 152 1e-31
seq231 127 5e-24
seq1336 111 4e-19
seq4 100 7e-16
>seq276
Length=376631
Score = 156 bits (172), Expect = 1e-32
Identities = 172/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| || || | ||||| | |||| || |||||| || ||||||||||| |
Sbjct 241195 TCCACCTCGAAGACGGAGTACTAAGTGAAGTGTTGATTCTTTCTGAATATTATAGTCAGA 241136
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
| ||| || || ||||| ||||| ||||| || || || | ||||||||| |||
Sbjct 241135 TAACGTACGGCCATCTTCCAATTGCTTTCCGGCAAAAATTAATCGCTGTTGATCTGGTGG 241076
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|||||||||||| || || |||||||||||||| ||||| |||||||| |||||||||
Sbjct 241075 GATTCCTTCTTTGTCTTGAATTTTCGCTTTCACATTTTCAATAGAATCTGACGATTCTAC 241016
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
||| | ||||| || || || || || || || || || || ||||||
Sbjct 241015 TTCCAAAGTGATGGTTTTGCCAGTAAGGGTTTTCACAAAGATTTGCATT 240967
Score = 152 bits (168), Expect = 1e-31
Identities = 171/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| || || | ||||| | |||| || |||||| || |||||||||||||
Sbjct 240967 TCCACCTCGAAGACGGAGTACTAAGTGAAGTGTTGATTCTTTCTGAATATTATAGTCGGA 240908
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
| ||| || || ||||| ||||| ||||| || || || | ||||||||| |||
Sbjct 240907 TAACGTACGGCCATCTTCCAATTGCTTTCCGGCAAAAATTAATCGCTGTTGATCTGGTGG 240848
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|||||||||||| || || ||||| |||||||| ||||| ||||| || |||||||||
Sbjct 240847 GATTCCTTCTTTGTCTTGAATTTTAGCTTTCACATTTTCAATAGAGTCTGACGATTCTAC 240788
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
||| | ||||| || || || || || || || || || || ||||||
Sbjct 240787 TTCCAAAGTGATGGTTTTGCCAGTAAGGGTTTTCACAAAGATTTGCATT 240739
Score = 147 bits (162), Expect = 5e-30
Identities = 170/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| || || | ||||| | |||| || |||||| || |||||||||||||
Sbjct 241423 TCCACCTCGAAGACGGAGTACTAAGTGAAGTGTTGATTCTTTCTGAATATTATAGTCGGA 241364
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
| ||| || || ||||| ||||| ||||| || || || | ||||||||| |||
Sbjct 241363 TAACGTACGGCCATCTTCCAATTGCTTTCCGGCAAAAATTAATCGCTGTTGATCTGGTGG 241304
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
||| |||||||| || || ||||| |||||||| ||||| ||||| || |||||||||
Sbjct 241303 GATCCCTTCTTTGTCTTGAATTTTAGCTTTCACATTTTCAATAGAGTCTGACGATTCTAC 241244
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
||| | ||||| || || || || || || || || || || ||||||
Sbjct 241243 TTCCAAAGTGATGGTTTTGCCAGTAAGGGTTTTCACAAAGATTTGCATT 241195
Score = 145 bits (160), Expect = 2e-29
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| || || | ||||| | |||| || |||||| || |||||||||||||
Sbjct 240739 TCCACCTCGAAGACGGAGTACTAAGTGAAGTGTTGATTCTTTCTGAATATTATAGTCGGA 240680
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
| ||| || || ||||| ||||| ||||| || || || | ||||||||| |||
Sbjct 240679 TAACGTACGGCCATCTTCCAATTGCTTTCCGGCAAAAATTAATCGCTGTTGATCTGGTGG 240620
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|||||||||||| || || ||||| |||||||| ||||| ||||| || ||||||||
Sbjct 240619 GATTCCTTCTTTGTCTTGAATTTTAGCTTTCACATTTTCAATAGAGTCTGATGATTCTAC 240560
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||| | || || || || || || ||||| || || || || |||||
Sbjct 240559 TTCCAAAGTTATGGTTTTTCCAGTAAGAGTTTTCACAAAGATTTGCAT 240512
Score = 141 bits (156), Expect = 2e-28
Identities = 173/235 (74%), Gaps = 1/235 (0%)
Strand=Plus/Minus
Query 288240 TACATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATA 288299
||||| |||||| || || | ||||| | |||| || |||||| || ||||||||
Sbjct 241656 TACAT-TCCACCTCGAAGACGGAGTACTAAGTGAAGTGTTGATTCTTTCTGAATATTATA 241598
Query 288300 GTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGA 288359
||||| | || || || ||||| ||||| ||||| || || || | |||||||||
Sbjct 241597 GTCGGATAAAGTACGGCCATCTTCCAATTGCTTTCCGGCAAAAATTAATCGCTGTTGATC 241538
Query 288360 ATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA 288419
|||||| |||||||| || || ||||| |||||||| ||||| ||||| || ||
Sbjct 241537 TGGTGGGATCCCTTCTTTGTCTTGAATTTTAGCTTTCACATTTTCAATAGAGTCTGAAGA 241478
Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
||||||||| | ||||| || || || || || || || || || || ||||||
Sbjct 241477 TTCTACTTCCAAAGTGATGGTTTTGCCAGTAAGGGTTTTCACAAAGATTTGCATT 241423
>seq2302
Length=121279
Score = 152 bits (168), Expect = 1e-31
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||||| | || | |||| || ||||||||| || || |||||||
Sbjct 53876 CCACCTCGGAGTCGCAACACCAAGTGAAGTGTAGATTCTTTTTGAATGTTGTAGTCGGAA 53935
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || ||||||||||| | ||| ||||| || ||||||| ||| |||||| ||||
Sbjct 53936 AGGGTACGTCCGTCTTCAAGTTGCTTTCCAGCAAAGATCAAACGTTGTTGATCTGGTGGG 53995
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| || || ||||| || || || || ||||| |||||||| |||||| |||
Sbjct 53996 ATACCTTCCTTGTCTTGGATCTTAGCCTTAACATTTTCAATAGAATCAGACGATTCCACT 54055
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| | || || ||||| || || || ||||| ||||| ||||||||
Sbjct 54056 TCCAATGTAATGGTCTTTCCTGTGAGGGTCTTAACGAAGATCTGCAT 54102
Score = 143 bits (158), Expect = 6e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||||| | || | |||| || ||||||||| || || |||||||
Sbjct 53420 CCACCTCGGAGTCGCAACACCAAGTGAAGTGTAGATTCTTTTTGAATGTTGTAGTCGGAA 53479
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || ||||||||||| | ||| ||||| || ||||||| ||| ||||| ||||
Sbjct 53480 AGGGTACGTCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAAACGTTGTTGGTCTGGTGGG 53539
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| || || ||||| || || || || ||||| |||||||| |||||| |||
Sbjct 53540 ATACCTTCCTTGTCTTGGATCTTAGCCTTAACATTTTCAATAGAATCAGACGATTCCACT 53599
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| | || || ||||| || || || ||||| ||||| || |||||
Sbjct 53600 TCCAATGTAATGGTCTTTCCTGTGAGGGTCTTAACGAAGATTTGCAT 53646
Score = 140 bits (154), Expect = 8e-28
Identities = 146/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||||||||| || |||||||||| || || ||||| ||||| | ||| ||||| || ||
Sbjct 52543 TTCTTTTTGAATGTTATAGTCGGAAAGGGTACGTCCATCTTCAAGTTGCTTTCCGGCAAA 52602
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||||||||| || || |||||| ||||| || || ||||| || || ||||| ||
Sbjct 52603 GATCAGACGTTGCTGGTCTGGTGGGATACCTTCCTTGTCTTGGATCTTGGCCTTCACATT 52662
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
||| || ||||| ||||||||||| | || || ||||| || || || ||||| ||
Sbjct 52663 TTCAATTGAATCAGAAGATTCTACTTCCAATGTAATGGTCTTTCCTGTGAGGGTCTTTAC 52722
Query 288462 GAATATCTGCAT 288473
||| || |||||
Sbjct 52723 GAAGATTTGCAT 52734
Score = 140 bits (154), Expect = 8e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||||| | || | |||| || ||||||||| || || |||||||
Sbjct 53648 CCACCTCGGAGTCGCAACACCAAGTGAAGTGTAGATTCTTTTTGAATGTTGTAGTCGGAA 53707
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || ||||||||||| | ||| ||||| || ||||||| ||| || || ||||
Sbjct 53708 AGGGTACGTCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAAACGTTGCTGGTCTGGTGGG 53767
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| || || ||||| || || || || ||||| |||||||| |||||| |||
Sbjct 53768 ATACCTTCCTTGTCTTGGATCTTAGCCTTAACATTTTCAATAGAATCAGACGATTCCACT 53827
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| | || || ||||| || || || ||||| ||||| || |||||
Sbjct 53828 TCCAATGTAATGGTCTTTCCTGTGAGGGTCTTAACGAAGATTTGCAT 53874
Score = 140 bits (154), Expect = 8e-28
Identities = 146/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
|||||| ||||| || ||||| | || |||||||||||||| | ||| ||||| || ||
Sbjct 54367 TTCTTTCTGGATGTTGTAGTCAGAAAGTGTGCGTCCGTCTTCAAGTTGCTTTCCGGCAAA 54426
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||||| ||| ||||| | ||| || |||||||| || ||||| || ||||| || ||
Sbjct 54427 GATCAAACGTTGTTGGTCAGGTGGAATACCTTCTTTGTCTTGGATCTTAGCTTTTACATT 54486
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
||| || ||||| || || ||||| | ||||| || || || |||| ||| |||||
Sbjct 54487 TTCAATGGAATCTGATGACTCAACTTCCAAAGTGATAGTTTTACCAGTCAAAGTTTTGAC 54546
Query 288462 GAATATCTGCAT 288473
|| ||||||||
Sbjct 54547 AAAGATCTGCAT 54558
Score = 134 bits (148), Expect = 3e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||||| | || | |||| || ||||||||| || || |||||||
Sbjct 54104 CCACCTCGGAGTCGCAACACCAAGTGAAGTGTAGATTCTTTTTGAATGTTGTAGTCGGAA 54163
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || ||||||||||| | ||| ||||| || ||||||| ||| ||||| ||||
Sbjct 54164 AGGGTACGTCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAAACGTTGTTGGTCTGGTGGG 54223
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| |||||||| || ||||| || ||||| || ||||| || ||||| ||||| ||
Sbjct 54224 ATACCTTCTTTGTCTTGGATCTTGGCTTTTACATTTTCAATGGAATCAGATGATTCCACC 54283
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| | || || ||||| || || || ||||| || || || |||||
Sbjct 54284 TCCAATGTAATGGTCTTTCCAGTGAGGGTCTTTACAAAGATTTGCAT 54330
Score = 131 bits (144), Expect = 4e-25
Identities = 144/192 (75%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||||||||| || |||||||| | || |||||||||||||| | ||| ||||| || ||
Sbjct 52771 TTCTTTTTGAATGTTATAGTCAGAAAGTGTGCGTCCGTCTTCAAGTTGCTTTCCGGCAAA 52830
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||||| ||| ||||| |||||| ||||| || || ||||| || || || || ||
Sbjct 52831 GATCAAACGTTGTTGGTCTGGTGGGATACCTTCCTTGTCTTGGATCTTAGCCTTAACATT 52890
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
||| || ||||| ||||| || || | || || ||||| || || || ||||| ||
Sbjct 52891 TTCAATGGAATCAGATGATTCCACCTCCAATGTAATGGTCTTTCCAGTGAGGGTCTTAAC 52950
Query 288462 GAATATCTGCAT 288473
||| || |||||
Sbjct 52951 GAAGATTTGCAT 52962
Score = 125 bits (138), Expect = 2e-23
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||||| | || | |||| || ||||||||| || || |||||||
Sbjct 52964 CCACCTCGGAGTCGCAACACCAAGTGAAGTGTAGATTCTTTTTGAATGTTGTAGTCGGAA 53023
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || ||||||||||| | ||| ||||| || ||||||| ||| || || ||||
Sbjct 53024 AGGGTACGTCCGTCTTCAAGTTGCTTTCCAGCAAAGATCAAACGTTGCTGGTCTGGTGGG 53083
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| || || ||||| || || || || ||||| || ||||| ||||| ||
Sbjct 53084 ATACCTTCCTTGTCTTGGATCTTGGCCTTAACATTTTCAATGGAATCAGATGATTCCACC 53143
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| | || || ||||| || || || ||||| ||||| || |||||
Sbjct 53144 TCCAATGTAATGGTCTTTCCAGTGAGGGTCTTAACGAAGATTTGCAT 53190
Score = 125 bits (138), Expect = 2e-23
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||||| | || | |||| || ||||||||| || || |||||||
Sbjct 53192 CCACCTCGGAGTCGCAACACCAAGTGAAGTGTAGATTCTTTTTGAATGTTGTAGTCGGAA 53251
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || ||||||||||| | ||| ||||| || ||||||| ||| || || ||||
Sbjct 53252 AGGGTACGTCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAAACGTTGCTGGTCTGGTGGG 53311
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| || || ||||| || || || || ||||| || ||||| ||||| ||
Sbjct 53312 ATACCTTCCTTGTCTTGGATCTTGGCCTTAACATTTTCAATGGAATCAGATGATTCCACC 53371
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| | || || ||||| || || || ||||| ||||| || |||||
Sbjct 53372 TCCAATGTAATGGTCTTTCCAGTGAGGGTCTTAACGAAGATTTGCAT 53418
>seq231
Length=580210
Score = 127 bits (140), Expect = 5e-24
Identities = 141/188 (75%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|||||||| ||||| || | | || ||||| ||||| | || || || |||||||||
Sbjct 340831 TTTTGGATGTTATAATCAGACAATGTACGTCCATCTTCAAGCTGCTTGCCGGCGAAGATC 340890
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405
| ||| |||||| |||||| ||||||||||| |||||||| ||||| || |||||
Sbjct 340891 AAACGTTGTTGATCGGGTGGGATACCTTCTTTATCTTGGATTTTGGCTTTGACATTTTCG 340950
Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAAT 288465
|||| || || || || || || ||||| |||||||| || || || || |||||
Sbjct 340951 ATAGTGTCTGAAGACTCGACCTCAAGGGTGATGGTCTTCCCTGTAAGGGTTTTCACGAAA 341010
Query 288466 ATCTGCAT 288473
|| |||||
Sbjct 341011 ATTTGCAT 341018
>seq1336
Length=246805
Score = 111 bits (122), Expect = 4e-19
Identities = 91/111 (82%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429
||||||||||| || ||||| | |||||| ||||| || ||||| ||| |||||||||
Sbjct 246368 CCTTCTTTATCTTGAATTTTGGATTTCACATTTTCAATTGAATCCGACGACTCTACTTCG 246309
Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTA 288480
|| |||||||| ||||| |||| ||||| ||||| ||||||||| || ||
Sbjct 246308 AGAGTGATCGTTTTCCCAGTCAACGTCTTCACGAAGATCTGCATTTTGCTA 246258
>seq4
Length=2478080
Score = 100 bits (110), Expect = 7e-16
Identities = 141/198 (71%), Gaps = 9/198 (5%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
|||||||||||| || ||||| | | || | || || ||||| ||| ||||| || ||
Sbjct 1881864 TTCTTTTTGGATGTTGTAGTCAGAACGAGTACATCTGTGTTCTAGTTGATTTCCAGCAAA 1881805
Query 288342 GATCAGACGCTGTTGAGAATCTGG------GATTCCTTCTTTATCCTGGATTTTCGCTTT 288395
| ||| ||| ||||| ||||| ||| ||||||| || ||||| || |||||
Sbjct 1881804 GGTCAAACGTTGTTG---GTCTGGTGCGGCGATGCCTTCTTGTTCTTGGATCTTGGCTTT 1881748
Query 288396 CACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGT 288455
|| ||||| || ||||| || || ||||| | |||| || || || |||| |||
Sbjct 1881747 TACTTTTTCAATGGAATCTGATGACTCAACTTCCAAAATGATAGTTTTACCAGTCAAAGT 1881688
Query 288456 CTTGACGAATATCTGCAT 288473
||||| || ||||| ||
Sbjct 1881687 TTTGACAAAGATCTGTAT 1881670
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179292789846150
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