Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq884 109 6e-19
seq208 109 6e-19
seq341 107 2e-18
seq3178 105 7e-18
seq71 105 7e-18
seq1493 104 3e-17
seq564 104 3e-17
seq186 102 9e-17
seq22 102 9e-17
seq10 102 9e-17
seq147 98.7 1e-15
seq4978 96.9 4e-15
seq251 96.9 4e-15
seq93 96.9 4e-15
seq2 93.3 5e-14
seq257 89.7 6e-13
seq1991 84.2 2e-11
>seq884
Length=173229
Score = 109 bits (120), Expect = 6e-19
Identities = 76/85 (89%), Gaps = 1/85 (1%)
Strand=Plus/Plus
Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056
|||||||||| ||| |||| | |||||||||| ||||||||||||||||||||| |||
Sbjct 38177 AAAAATTTTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 38236
Query 57057 CTCACCACTATACTACCGAGGATTG 57081
|| ||||||||||||||||||||||
Sbjct 38237 CTTACCACTATACTACCGAGGATTG 38261
Score = 107 bits (118), Expect = 2e-18
Identities = 76/86 (88%), Gaps = 2/86 (2%)
Strand=Plus/Plus
Query 56998 AAAAATTTT--CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 57055
||||||||| |||| |||| | |||||||||| ||||||||||||||||||||| ||
Sbjct 2481 AAAAATTTTTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 2540
Query 57056 ACTCACCACTATACTACCGAGGATTG 57081
||| ||||||||||||||||||||||
Sbjct 2541 ACTTACCACTATACTACCGAGGATTG 2566
Score = 107 bits (118), Expect = 2e-18
Identities = 76/86 (88%), Gaps = 2/86 (2%)
Strand=Plus/Minus
Query 56998 AAAAATTTT--CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 57055
||||||||| |||| |||| | |||||||||| ||||||||||||||||||||| ||
Sbjct 7111 AAAAATTTTTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 7052
Query 57056 ACTCACCACTATACTACCGAGGATTG 57081
||| ||||||||||||||||||||||
Sbjct 7051 ACTTACCACTATACTACCGAGGATTG 7026
>seq208
Length=594663
Score = 109 bits (120), Expect = 6e-19
Identities = 76/85 (89%), Gaps = 1/85 (1%)
Strand=Plus/Plus
Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056
|||||||||| ||| |||| | |||||||||| ||||||||||||||||||||| |||
Sbjct 1018 AAAAATTTTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 1077
Query 57057 CTCACCACTATACTACCGAGGATTG 57081
|| ||||||||||||||||||||||
Sbjct 1078 CTTACCACTATACTACCGAGGATTG 1102
>seq341
Length=494976
Score = 107 bits (118), Expect = 2e-18
Identities = 76/86 (88%), Gaps = 2/86 (2%)
Strand=Plus/Minus
Query 56998 AAAAATTTT--CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 57055
||||||||| |||| |||| | |||||||||| ||||||||||||||||||||| ||
Sbjct 193757 AAAAATTTTTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 193698
Query 57056 ACTCACCACTATACTACCGAGGATTG 57081
||| ||||||||||||||||||||||
Sbjct 193697 ACTTACCACTATACTACCGAGGATTG 193672
Score = 104 bits (114), Expect = 3e-17
Identities = 75/86 (87%), Gaps = 2/86 (2%)
Strand=Plus/Minus
Query 56998 AAAAATTTT--CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 57055
||||||||| |||| |||| | |||||||||| ||||||||||||||||||||| ||
Sbjct 231038 AAAAATTTTTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 230979
Query 57056 ACTCACCACTATACTACCGAGGATTG 57081
||| ||||||||||||||||||| ||
Sbjct 230978 ACTTACCACTATACTACCGAGGACTG 230953
Score = 104 bits (114), Expect = 3e-17
Identities = 73/82 (89%), Gaps = 1/82 (1%)
Strand=Plus/Plus
Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056
|||||||||| ||| |||| | |||||||||| ||||||||||||||||||||| |||
Sbjct 235435 AAAAATTTTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 235494
Query 57057 CTCACCACTATACTACCGAGGA 57078
|| |||||||||||||||||||
Sbjct 235495 CTTACCACTATACTACCGAGGA 235516
Score = 102 bits (112), Expect = 9e-17
Identities = 70/79 (89%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062
||| |||| |||| | |||||||||| ||||||||||||||||||||| ||||| |||
Sbjct 189124 TTTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACC 189183
Query 57063 ACTATACTACCGAGGATTG 57081
|||||||||||||||||||
Sbjct 189184 ACTATACTACCGAGGATTG 189202
>seq3178
Length=39119
Score = 105 bits (116), Expect = 7e-18
Identities = 75/85 (88%), Gaps = 1/85 (1%)
Strand=Plus/Plus
Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056
|||||||||| ||| |||| | |||||||||| ||||||||||||||||||||| |||
Sbjct 3456 AAAAATTTTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 3515
Query 57057 CTCACCACTATACTACCGAGGATTG 57081
|| ||||||||||||||||||| ||
Sbjct 3516 CTTACCACTATACTACCGAGGACTG 3540
>seq71
Length=1863596
Score = 105 bits (116), Expect = 7e-18
Identities = 72/81 (89%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
|||||||| |||| |||| | |||||||||| ||||||||||||||||||||| ||||
Sbjct 1289175 AAAAATTTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 1289116
Query 57058 TCACCACTATACTACCGAGGA 57078
| |||||||||||||||||||
Sbjct 1289115 TTACCACTATACTACCGAGGA 1289095
>seq1493
Length=111453
Score = 104 bits (114), Expect = 3e-17
Identities = 73/82 (89%), Gaps = 1/82 (1%)
Strand=Plus/Minus
Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056
|||||||||| ||| |||| | |||||||||| ||||||||||||||||||||| |||
Sbjct 104106 AAAAATTTTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 104047
Query 57057 CTCACCACTATACTACCGAGGA 57078
|| |||||||||||||||||||
Sbjct 104046 CTTACCACTATACTACCGAGGA 104025
>seq564
Length=290911
Score = 104 bits (114), Expect = 3e-17
Identities = 74/84 (88%), Gaps = 1/84 (1%)
Strand=Plus/Plus
Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056
|||||||| | ||| |||| | |||||||||| ||||||||||||||||||||| |||
Sbjct 175229 AAAAATTTCCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 175288
Query 57057 CTCACCACTATACTACCGAGGATT 57080
|| |||||||||||||||||||||
Sbjct 175289 CTTACCACTATACTACCGAGGATT 175312
>seq186
Length=692473
Score = 102 bits (112), Expect = 9e-17
Identities = 75/85 (88%), Gaps = 2/85 (2%)
Strand=Plus/Plus
Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGG-TCTCCCGCGTGACAGGCGGACAT 57055
|||||||||| ||| |||| | |||||||||| || ||||||||||||||||||| ||
Sbjct 111252 AAAAATTTTCCTCCCCGGCGGGGAATCGAACCCCGGGTCTCCCGCGTGACAGGCGGGGAT 111311
Query 57056 ACTCACCACTATACTACCGAGGATT 57080
||| |||||||||||||||||||||
Sbjct 111312 ACTTACCACTATACTACCGAGGATT 111336
>seq22
Length=1296824
Score = 102 bits (112), Expect = 9e-17
Identities = 73/84 (87%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||| |||| |||| |||| | |||||||||| ||||||||||||||||||||| ||||
Sbjct 740745 AAATATTTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 740686
Query 57058 TCACCACTATACTACCGAGGATTG 57081
| ||||||||||||||||||| ||
Sbjct 740685 TTACCACTATACTACCGAGGACTG 740662
Score = 102 bits (112), Expect = 9e-17
Identities = 73/84 (87%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||| |||| |||| |||| | |||||||||| ||||||||||||||||||||| ||||
Sbjct 752231 AAATATTTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 752172
Query 57058 TCACCACTATACTACCGAGGATTG 57081
| ||||||||||||||||||| ||
Sbjct 752171 TTACCACTATACTACCGAGGACTG 752148
>seq10
Length=3073041
Score = 102 bits (112), Expect = 9e-17
Identities = 71/81 (88%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||| |||| |||| |||| | |||||||||| ||||||||||||||||||||| ||||
Sbjct 709856 AAATATTTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 709797
Query 57058 TCACCACTATACTACCGAGGA 57078
| |||||||||||||||||||
Sbjct 709796 TTACCACTATACTACCGAGGA 709776
>seq147
Length=672183
Score = 98.7 bits (108), Expect = 1e-15
Identities = 69/79 (87%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 57000 AAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTC 57059
||||| |||| |||| | |||||||||| ||||||||||||||||||||| |||||
Sbjct 128467 AAATTGGCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTT 128408
Query 57060 ACCACTATACTACCGAGGA 57078
|||||||||||||||||||
Sbjct 128407 ACCACTATACTACCGAGGA 128389
>seq4978
Length=4776
Score = 96.9 bits (106), Expect = 4e-15
Identities = 70/81 (86%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||| || | |||| |||| | |||||||||| ||||||||||||||||||||| ||||
Sbjct 1908 AAATATCTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 1849
Query 57058 TCACCACTATACTACCGAGGA 57078
| |||||||||||||||||||
Sbjct 1848 TTACCACTATACTACCGAGGA 1828
>seq251
Length=308917
Score = 96.9 bits (106), Expect = 4e-15
Identities = 70/81 (86%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||| || | |||| |||| | |||||||||| ||||||||||||||||||||| ||||
Sbjct 134350 AAATATCTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 134291
Query 57058 TCACCACTATACTACCGAGGA 57078
| |||||||||||||||||||
Sbjct 134290 TTACCACTATACTACCGAGGA 134270
>seq93
Length=972031
Score = 96.9 bits (106), Expect = 4e-15
Identities = 68/78 (87%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 57001 AATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCA 57060
|||| |||| |||| | |||||||||| ||||||||||||||||||||| ||||| |
Sbjct 74711 AATTGGCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTA 74652
Query 57061 CCACTATACTACCGAGGA 57078
||||||||||||||||||
Sbjct 74651 CCACTATACTACCGAGGA 74634
>seq2
Length=2384549
Score = 93.3 bits (102), Expect = 5e-14
Identities = 73/87 (84%), Gaps = 3/87 (3%)
Strand=Plus/Plus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA- 57056
||| |||| |||| |||| | |||||||||| ||||||||||||||||||||| |||
Sbjct 446127 AAATATTTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 446186
Query 57057 --CTCACCACTATACTACCGAGGATTG 57081
|| ||||||||||||||||||| ||
Sbjct 446187 GTCTTACCACTATACTACCGAGGACTG 446213
>seq257
Length=825446
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 595561 CTCCCCGCCTGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 595620
Query 57067 TACTACCGAGGA 57078
||||||||||||
Sbjct 595621 TACTACCGAGGA 595632
>seq1991
Length=14245
Score = 84.2 bits (92), Expect = 2e-11
Identities = 60/69 (87%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| |||| | || ||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 12001 CTCCCCGGCGGGGAAACGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 12060
Query 57067 TACTACCGA 57075
|||||||||
Sbjct 12061 TACTACCGA 12069
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543050345422000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |