Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_011357.1
Length=62147
Score E
Sequences producing significant alignments: (Bits) Value
seq2959 293 9e-75
seq14394 105 3e-18
>seq2959
Length=4395
Score = 293 bits (324), Expect = 9e-75
Identities = 461/647 (71%), Gaps = 16/647 (2%)
Strand=Plus/Minus
Query 14132 GCGCGGGGTATTGATTTTCTCAATGGAAATGAGCGCATTGCAGATTGCAGAGCGA-AGCA 14190
|||||| || |||||||| ||||||||| ||| ||||||| ||||| |||
Sbjct 1110 GCGCGGCGTGCTGATTTTCAGCATGGAAATGGACGCTAATCAGATTGTGGAGCGCCAGC- 1052
Query 14191 TTGCCAACGCCGGGAGGATGTCGGTTAGCGTACTGCGAAATCCTGCATCGATGGATGACG 14250
|||| || || | |||| || | |||||||||||| ||| ||||| ||||
Sbjct 1051 TTGCAGGAGCAGGAAACTTGTCAGTGTCGGCACTGCGAAATCCAGCACAAATGGACGACG 992
Query 14251 AGGGCTGGGCACGTGTTGCTAACGGCATGAGTCAGCTTGCA-GATTTGGATGTATGGGTA 14309
| ||||||||| || | || ||| | || |||| ||| | || |||||| |
Sbjct 991 AAGGCTGGGCAAAAGTCACCGCTGGAATGGGA-AGATTGCTTGATCTCGACGTATGGATT 933
Query 14310 GTCGATGCTT-CGCGGTTATCGGTCGAAGAAATACGCTCAATCGCAGAACGGCATAAGCA 14368
|| || || | | | | || | || | || ||| | ||||| ||||| || ||||
Sbjct 932 GTGGACGCCAGCAAGATGAACG-TGGAGCAGATCCGCGCCATCGCCGAACGTCACAAGCG 874
Query 14369 GGAAAATCCAAACCTGTCACTCATCATGGCGGATTATCTTGGCCTGATTGAGAAGCCGAA 14428
| || || || || |||||| | | || || || ||||||||||| ||||| ||
Sbjct 873 CAACAACCCGGCACTATCGCTCATCCTTGTTGACTACCTCGGCCTGATTGACAAGCCAAA 814
Query 14429 AGCAGACCGCAACGACCTCGCAATTGCTCACATCTCCGGAAGCCTGAAGGCGATGGCGAA 14488
||||||||||||||||| || || || ||||||||||| ||||||||| ||||| ||
Sbjct 813 GGCAGACCGCAACGACCTGGCGATCGCGCACATCTCCGGCAGCCTGAAGCGCATGGCAAA 754
Query 14489 AGACCTGAAAACACCGGTTATCTCCCTGAGTCAGCTTTCGCGCGATGTTGAGAAGCGACC 14548
||| || ||||| || ||||| || || |||||||| || ||||||||||| ||||| ||
Sbjct 753 AGATCTCAAAACGCCTGTTATGTCGCTTAGTCAGCTATCCCGCGATGTTGAAAAGCGCCC 694
Query 14549 AA----ACA--AACGCCCGACAAACGCAGATTTGCGTGATTCAGGAAGCATTGAACAGGA 14602
| ||| || ||||| ||||| ||| |||| || || ||||||||||| |||||
Sbjct 693 GAAAGGACAGCGCCGACCGACCAACGCCGATCTGCGCGACTCGGGAAGCATTGAGCAGGA 634
Query 14603 CGCAGACTCAATCATCATGCTCTATCGGGAAGCGGTATATGATG-AGAA-CAGTAGCGCC 14660
||| ||| |||||||||||||| || ||||| || ||||| | |||| | | ||
Sbjct 633 CGCCGACAGCATCATCATGCTCTACCGCGAAGCTGTGTATGACGAAGAATCCCCA--GCT 576
Query 14661 GCGCCATTTGCTGAAATCATCGTGACGAAAAACCGTTTTGGCTCGCTTGGTACAGTTTAC 14720
||| || || ||||||||||| || |||||||| || || ||| || || || |||
Sbjct 575 GCGAAGTTGGCAGAAATCATCGTCACCAAAAACCGCTTCGGGCAGCTCGGCACTGTCTAC 516
Query 14721 CAGCGGTTCTGTAACGGACACTTTGTTGCATGTGACCAGGATGAAGC 14767
||| ||| |||||| || ||| || |||||||| |||||
Sbjct 515 CAGGCTTTCAATAACGGGCATTTTCAGCCAACGGACCAGGAAGAAGC 469
>seq14394
Length=813
Score = 105 bits (116), Expect = 3e-18
Identities = 149/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 60229 GTGATGGTTCATTACTGGTTTGCATAATGGATAGAGAACTGAGGATAAAA-GATATCCCA 60287
||||||| ||||| ||||| |||| ||||| | || ||||||||||| | |||| |
Sbjct 263 GTGATGGCTCATTGCTGGTATGCAGGATGGAAGGCGAGCTGAGGATAAAGCGCTATCGTA 322
Query 60288 AAACCCCAAAATCTCATCTTTAGGATTTGCAGAAAGGGAGGCGTAAACAAATACCCGCTC 60347
| ||| | | || ||| | |||||||||| || ||||| || | ||||| | ||
Sbjct 323 AGCATCCACAGCCACACCTTGAAGATTTGCAGACTGGCAGGCGAGAAGAGATACCAGTTC 382
Query 60348 ATGAAAACGGAACTAGTCCAGATGTGATGTTTGTGGTTATAACATACATCATCAACGATG 60407
| || ||||||| || || |||| || |||| ||| || |||||| ||||||||||
Sbjct 383 ACGATGACGGAACGAGCCCGGATGCTATCTTTGGGGTGATCACATACTGCATCAACGATA 442
Query 60408 CTCGTTATGGTGAGTTTGATGACTACCC 60435
| ||||||||||| || | |||
Sbjct 443 TGAGGGCGGGTGAGTTTGACGATTGCCC 470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 198692333602650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |