Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_011976.1 Length=43016 Score E Sequences producing significant alignments: (Bits) Value seq14394 176 1e-39 >seq14394 Length=813 Score = 176 bits (194), Expect = 1e-39 Identities = 159/201 (79%), Gaps = 5/201 (2%) Strand=Plus/Plus Query 21474 GTGAGACAAAAGCGGGACACACAAAGCTTTGCATCGGTTTGNNNNNNNNNNNNNGTTTTT 21533 |||||||| || |||||||||||||||||||||||||||| |||||| Sbjct 477 GTGAGACAGAAATGGGACACACAAAGCTTTGCATCGGTTTGCAAGGCTTTGCATGTTTTT 536 Query 21534 CGAAGATGGGACTTGTGAGCGCGGTATTGATGGGGTATGTT-GTTGACTTAGA--AGGTA 21590 |||||||||||| ||||||||| || |||||||||| ||| |||| |||| ||||| Sbjct 537 CGAAGATGGGACGTGTGAGCGCCTTAGTGATGGGGTAAGTTTGTTG--TTAGCTCAGGTA 594 Query 21591 GTTCTAGGAACTTCTAAGCCGTGGGTCGCAGGTTCGAATCCTGCAGGGCGCACCATTATA 21650 |||| ||||||||||||||||| |||| | ||||||||||| ||||||| ||||| Sbjct 595 GTTCCAGGAACTTCTAAGCCGTATGTCGTACGTTCGAATCCTACAGGGCGTGCCATTTAG 654 Query 21651 TATCAACTGGTTACGCCTCTT 21671 | ||| ||| | ||||||||| Sbjct 655 TTTCAGCTGTTAACGCCTCTT 675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137490526551300