Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_014635.1 Length=163875 Score E Sequences producing significant alignments: (Bits) Value seq2024 86.0 7e-12 seq2189 82.4 8e-11 >seq2024 Length=8047 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 106690 CTTAGCTCAGTTGGATAGAGCAGCGGCCTTCTAAGCCGCGGGTCATTGGTTCAAATCCAA 106749 |||||||||||||||||||||| ||||||||||||||| |||| | ||||| ||||| | Sbjct 7818 CTTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCGTAGGTTCGAATCCTA 7759 Query 106750 TAGGGACTGCCA 106761 |||| ||||| Sbjct 7758 CAGGGCGTGCCA 7747 >seq2189 Length=7749 Score = 82.4 bits (90), Expect = 8e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 106682 TATGGTCTCTTAGCTCAGTTGGATAGAGCAGCGGCCTTCTAAGCCGCGGGTCATTGGTTC 106741 |||| | |||||||||| ||||||||||| ||||||||||||||| ||||| ||||| Sbjct 7522 TATGCGCCCTTAGCTCAGCTGGATAGAGCACCGGCCTTCTAAGCCGTAGGTCACAGGTTC 7463 Query 106742 AAATCCAATAGGGACTGCCA 106761 ||||| ||||| ||||| Sbjct 7462 GAATCCTGTAGGGCGTGCCA 7443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524115209905000