Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_014900.1 Length=40986 Score E Sequences producing significant alignments: (Bits) Value seq14394 140 8e-29 >seq14394 Length=813 Score = 140 bits (154), Expect = 8e-29 Identities = 130/162 (80%), Gaps = 5/162 (3%) Strand=Plus/Plus Query 2919 TGGGACAAAAACGGGACACACAAAGCTTTGCATCGGCTTGCAAGGCTTTGCATGTTTTTC 2978 || |||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 478 TGAGACAGAAATGGGACACACAAAGCTTTGCATCGGTTTGCAAGGCTTTGCATGTTTTTC 537 Query 2979 GAAGATGGGACGTGTGAGCGCAGGTATGACGCGGTATG-TTGTTGACTTA--AAAGGTAG 3035 ||||||||||||||||||||| ||| | |||| | |||||| ||| |||||| Sbjct 538 GAAGATGGGACGTGTGAGCGCCTTAGTGATGGGGTAAGTTTGTTG--TTAGCTCAGGTAG 595 Query 3036 TTCTTATAATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTA 3077 ||| || | ||| || | |||||| |||||| ||||| Sbjct 596 TTCCAGGAACTTCTAAGCCGTATGTCGTACGTTCGAATCCTA 637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130996372125800