Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_015265.1
Length=37236
Score E
Sequences producing significant alignments: (Bits) Value
seq3309 84.2 5e-12
>seq3309
Length=43154
Score = 84.2 bits (92), Expect = 5e-12
Identities = 117/159 (74%), Gaps = 4/159 (3%)
Strand=Plus/Plus
Query 15322 TCGCCGGCCTTGGCCTTGCCGGGGTCGATTTCCTTGTAGCGGCCGCGCACGTACACTTCG 15381
||||||| ||| || ||||| ||| | ||||||| |||||| |||||| || ||
Sbjct 42978 TCGCCGGTCTTCCACTCGCCGGAGTCCAGCTCCTTGTGGCGGCCACGCACGACCAGCTCC 43037
Query 15382 ACCGCGTCGACTTCCTCGGTGTCGTCGCGCTGATAGGAGCCAGCGAAACGTACGGTG-AC 15440
||||| | ||||| ||||||||||||||||| |||||| | || || | | || ||
Sbjct 43038 ACCGCCTGCACTTCGCCGGTGTCGTCGCGCTGAATGGAGCCGGTAAAGCGCA-GCTGCAC 43096
Query 15441 GCCGTCGACCTTCGACGTGCCCCATGT-CTTGAACATCT 15478
|||||| || | ||| ||||| | |||||||| ||
Sbjct 43097 GCCGTCCACGGTAAGGGTG-CCCATCTGCTTGAACAGCT 43134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 118999781438300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |