Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq3309 84.2 5e-12 >seq3309 Length=43154 Score = 84.2 bits (92), Expect = 5e-12 Identities = 117/159 (74%), Gaps = 4/159 (3%) Strand=Plus/Plus Query 15322 TCGCCGGCCTTGGCCTTGCCGGGGTCGATTTCCTTGTAGCGGCCGCGCACGTACACTTCG 15381 ||||||| ||| || ||||| ||| | ||||||| |||||| |||||| || || Sbjct 42978 TCGCCGGTCTTCCACTCGCCGGAGTCCAGCTCCTTGTGGCGGCCACGCACGACCAGCTCC 43037 Query 15382 ACCGCGTCGACTTCCTCGGTGTCGTCGCGCTGATAGGAGCCAGCGAAACGTACGGTG-AC 15440 ||||| | ||||| ||||||||||||||||| |||||| | || || | | || || Sbjct 43038 ACCGCCTGCACTTCGCCGGTGTCGTCGCGCTGAATGGAGCCGGTAAAGCGCA-GCTGCAC 43096 Query 15441 GCCGTCGACCTTCGACGTGCCCCATGT-CTTGAACATCT 15478 |||||| || | ||| ||||| | |||||||| || Sbjct 43097 GCCGTCCACGGTAAGGGTG-CCCATCTGCTTGAACAGCT 43134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118999781438300