Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq15 91.5 2e-13 >seq15 Length=1590180 Score = 91.5 bits (100), Expect = 2e-13 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 159632 AGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACT 159691 |||| ||| | ||||| || || | |||||||| | || | ||| |||| Sbjct 1396236 AGGTTTATTTGGATGGAGCTAACATGAATGCACAACTTGGATTGTGTCGACCCGGTGATA 1396295 Query 159692 ATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTG 159751 ||| |||||||||| |||| | || |||||||||||||||||||| || |||||||| | Sbjct 1396296 TTGGAGCAGATGTATCTCATTTGAATTTACATAAGACATTCTGTATACCTCATGGAGGCG 1396355 Query 159752 GAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 |||||||||| | || || || | ||| Sbjct 1396356 GAGGTCCTGGAATGGGGCCAATAGTTGT 1396383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587875335938000