Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq2302 152 1e-31
seq276 122 2e-22
seq1265 100 6e-16
>seq2302
Length=121279
Score = 152 bits (168), Expect = 1e-31
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981
||| | ||| || | |||||| || || ||||||||||| || || |||| ||| || |
Sbjct 52516 GAGACGCAACACCAAGTGAAGGGTAGATTCTTTTTGAATGTTATAGTCGGAAAGGGTACG 52575
Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041
|||||||| || ||||| || || ||||| || ||||| |||||||| || || |||||
Sbjct 52576 TCCATCTTCAAGTTGCTTTCCGGCAAAGATCAGACGTTGCTGGTCTGGTGGGATACCTTC 52635
Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101
|||||||| || || ||| || || ||||| | || ||| ||| ||||| | ||
Sbjct 52636 CTTGTCTTGGATCTTGGCCTTCACATTTTCAATTGAATCAGAAGATTCTACTTCCAATGT 52695
Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| ||||||||||| | || |||||||| | ||||||
Sbjct 52696 AATGGTCTTTCCTGTGAGGGTCTTTACGAAGATTTGCAT 52734
Score = 152 bits (168), Expect = 1e-31
Identities = 167/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|| ||||| ||| || | |||||| || || ||||||||||| ||||| |||| ||| ||
Sbjct 53425 TCGGAGTCGCAACACCAAGTGAAGTGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGGGT 53484
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| || ||||| || ||||| || || ||||| | |||||||||||||| || || ||
Sbjct 53485 ACGTCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAAACGTTGTTGGTCTGGTGGGATACC 53544
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| |||||||| || || ||| || || ||||| | || || ||||||||| |
Sbjct 53545 TTCCTTGTCTTGGATCTTAGCCTTAACATTTTCAATAGAATCAGACGATTCCACTTCCAA 53604
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|||| ||||||||||| | || || ||||| | ||||||
Sbjct 53605 TGTAATGGTCTTTCCTGTGAGGGTCTTAACGAAGATTTGCAT 53646
Score = 149 bits (164), Expect = 1e-30
Identities = 166/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|| ||||| ||| || | |||||| || || ||||||||||| ||||| |||| ||| ||
Sbjct 53653 TCGGAGTCGCAACACCAAGTGAAGTGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGGGT 53712
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| || ||||| || ||||| || || ||||| | ||||| |||||||| || || ||
Sbjct 53713 ACGTCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAAACGTTGCTGGTCTGGTGGGATACC 53772
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| |||||||| || || ||| || || ||||| | || || ||||||||| |
Sbjct 53773 TTCCTTGTCTTGGATCTTAGCCTTAACATTTTCAATAGAATCAGACGATTCCACTTCCAA 53832
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|||| ||||||||||| | || || ||||| | ||||||
Sbjct 53833 TGTAATGGTCTTTCCTGTGAGGGTCTTAACGAAGATTTGCAT 53874
Score = 149 bits (164), Expect = 1e-30
Identities = 166/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|| ||||| ||| || | |||||| || || ||||||||||| ||||| |||| ||| ||
Sbjct 54109 TCGGAGTCGCAACACCAAGTGAAGTGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGGGT 54168
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| || ||||| || ||||| || || ||||| | |||||||||||||| || || ||
Sbjct 54169 ACGTCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAAACGTTGTTGGTCTGGTGGGATACC 54228
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|||||||||||| || || || || || ||||||| || || |||||| || |
Sbjct 54229 TTCTTTGTCTTGGATCTTGGCTTTTACATTTTCAATGGAATCAGATGATTCCACCTCCAA 54288
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|||| |||||||| || | || ||||| || | ||||||
Sbjct 54289 TGTAATGGTCTTTCCAGTGAGGGTCTTTACAAAGATTTGCAT 54330
Score = 143 bits (158), Expect = 6e-29
Identities = 165/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|| ||||| ||| || | |||||| || || ||||||||||| ||||| |||| ||| ||
Sbjct 52969 TCGGAGTCGCAACACCAAGTGAAGTGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGGGT 53028
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| || ||||| || ||||| || || ||||| | ||||| |||||||| || || ||
Sbjct 53029 ACGTCCGTCTTCAAGTTGCTTTCCAGCAAAGATCAAACGTTGCTGGTCTGGTGGGATACC 53088
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| |||||||| || || ||| || || ||||||| || || |||||| || |
Sbjct 53089 TTCCTTGTCTTGGATCTTGGCCTTAACATTTTCAATGGAATCAGATGATTCCACCTCCAA 53148
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|||| |||||||| || | || || ||||| | ||||||
Sbjct 53149 TGTAATGGTCTTTCCAGTGAGGGTCTTAACGAAGATTTGCAT 53190
Score = 143 bits (158), Expect = 6e-29
Identities = 165/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|| ||||| ||| || | |||||| || || ||||||||||| ||||| |||| ||| ||
Sbjct 53197 TCGGAGTCGCAACACCAAGTGAAGTGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGGGT 53256
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| || ||||| || ||||| || || ||||| | ||||| |||||||| || || ||
Sbjct 53257 ACGTCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAAACGTTGCTGGTCTGGTGGGATACC 53316
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| |||||||| || || ||| || || ||||||| || || |||||| || |
Sbjct 53317 TTCCTTGTCTTGGATCTTGGCCTTAACATTTTCAATGGAATCAGATGATTCCACCTCCAA 53376
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|||| |||||||| || | || || ||||| | ||||||
Sbjct 53377 TGTAATGGTCTTTCCAGTGAGGGTCTTAACGAAGATTTGCAT 53418
Score = 143 bits (158), Expect = 6e-29
Identities = 165/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|| ||||| ||| || | |||||| || || ||||||||||| ||||| |||| ||| ||
Sbjct 53881 TCGGAGTCGCAACACCAAGTGAAGTGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGGGT 53940
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| || ||||| || ||||| || || ||||| | |||||||| ||||| || || ||
Sbjct 53941 ACGTCCGTCTTCAAGTTGCTTTCCAGCAAAGATCAAACGTTGTTGATCTGGTGGGATACC 54000
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| |||||||| || || ||| || || ||||| | || || ||||||||| |
Sbjct 54001 TTCCTTGTCTTGGATCTTAGCCTTAACATTTTCAATAGAATCAGACGATTCCACTTCCAA 54060
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|||| ||||||||||| | || || ||||| | |||||
Sbjct 54061 TGTAATGGTCTTTCCTGTGAGGGTCTTAACGAAGATCTGCAT 54102
Score = 136 bits (150), Expect = 9e-27
Identities = 161/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||| ||| || | |||||| || || ||||||||||| || || || | ||| || |
Sbjct 52745 AGTCGCAACACCAAGTGAAGGGTAGATTCTTTTTGAATGTTATAGTCAGAAAGTGTGCGT 52804
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|| ||||| || ||||| || || ||||| | |||||||||||||| || || |||||
Sbjct 52805 CCGTCTTCAAGTTGCTTTCCGGCAAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCC 52864
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|||||||| || || ||| || || ||||||| || || |||||| || | |||
Sbjct 52865 TTGTCTTGGATCTTAGCCTTAACATTTTCAATGGAATCAGATGATTCCACCTCCAATGTA 52924
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| |||||||| || | || || ||||| | ||||||
Sbjct 52925 ATGGTCTTTCCAGTGAGGGTCTTAACGAAGATTTGCAT 52962
Score = 120 bits (132), Expect = 7e-22
Identities = 158/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981
||| | ||| || | |||||| || || ||||| || || ||||| || | ||| || |
Sbjct 54340 GAGACGCAACACTAAGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCAGAAAGTGTGCG 54399
Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041
|| ||||| || ||||| || || ||||| | ||||||||||| || ||||| |||||
Sbjct 54400 TCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAAACGTTGTTGGTCAGGTGGAATACCTTC 54459
Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101
||||||||| || || || || || ||||||| || || || ||||| | ||
Sbjct 54460 TTTGTCTTGGATCTTAGCTTTTACATTTTCAATGGAATCTGATGACTCAACTTCCAAAGT 54519
Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| || || || ||||||||||| || || | |||||
Sbjct 54520 GATAGTTTTACCAGTCAAAGTTTTGACAAAGATCTGCAT 54558
>seq276
Length=376631
Score = 122 bits (134), Expect = 2e-22
Identities = 150/205 (73%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
|||||| || || ||||| |||||||| || |||| | ||| | |||||||| | ||
Sbjct 241627 GTGAAGTGTTGATTCTTTCTGAATATTATAGTCGGATAAAGTACGGCCATCTTCCAATTG 241568
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || || || || | ||| ||||| ||||| || || ||||||||||||||||||||
Sbjct 241567 CTTTCCGGCAAAAATTAATCGCTGTTGATCTGGTGGGATCCCTTCTTTGTCTTGAATTTT 241508
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|| || || ||||| | ||| ||| ||| ||||| | || | || || || ||
Sbjct 241507 AGCTTTCACATTTTCAATAGAGTCTGAAGATTCTACTTCCAAAGTGATGGTTTTGCCAGT 241448
Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141
| ||||| || || | |||||||
Sbjct 241447 AAGGGTTTTCACAAAGATTTGCATT 241423
Score = 120 bits (132), Expect = 7e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
|||||| || || ||||| |||||||| || |||| | || | |||||||| | ||
Sbjct 240715 GTGAAGTGTTGATTCTTTCTGAATATTATAGTCGGATAACGTACGGCCATCTTCCAATTG 240656
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || || || || | ||| ||||| ||||| || || ||||||||||||||||||||
Sbjct 240655 CTTTCCGGCAAAAATTAATCGCTGTTGATCTGGTGGGATTCCTTCTTTGTCTTGAATTTT 240596
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|| || || ||||| | ||| || ||| ||||| | || | || ||||| ||
Sbjct 240595 AGCTTTCACATTTTCAATAGAGTCTGATGATTCTACTTCCAAAGTTATGGTTTTTCCAGT 240536
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| |||||| || || | ||||||
Sbjct 240535 AAGAGTTTTCACAAAGATTTGCAT 240512
Score = 113 bits (124), Expect = 1e-19
Identities = 148/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
|||||| || || ||||| |||||||| || |||| | || | |||||||| | ||
Sbjct 240943 GTGAAGTGTTGATTCTTTCTGAATATTATAGTCGGATAACGTACGGCCATCTTCCAATTG 240884
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || || || || | ||| ||||| ||||| || || ||||||||||||||||||||
Sbjct 240883 CTTTCCGGCAAAAATTAATCGCTGTTGATCTGGTGGGATTCCTTCTTTGTCTTGAATTTT 240824
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|| || || ||||| | ||| || ||| ||||| | || | || || || ||
Sbjct 240823 AGCTTTCACATTTTCAATAGAGTCTGACGATTCTACTTCCAAAGTGATGGTTTTGCCAGT 240764
Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141
| ||||| || || | |||||||
Sbjct 240763 AAGGGTTTTCACAAAGATTTGCATT 240739
Score = 113 bits (124), Expect = 1e-19
Identities = 148/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
|||||| || || ||||| |||||||| || |||| | || | |||||||| | ||
Sbjct 241399 GTGAAGTGTTGATTCTTTCTGAATATTATAGTCGGATAACGTACGGCCATCTTCCAATTG 241340
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || || || || | ||| ||||| ||||| || || ||||||||||||||||||||
Sbjct 241339 CTTTCCGGCAAAAATTAATCGCTGTTGATCTGGTGGGATCCCTTCTTTGTCTTGAATTTT 241280
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|| || || ||||| | ||| || ||| ||||| | || | || || || ||
Sbjct 241279 AGCTTTCACATTTTCAATAGAGTCTGACGATTCTACTTCCAAAGTGATGGTTTTGCCAGT 241220
Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141
| ||||| || || | |||||||
Sbjct 241219 AAGGGTTTTCACAAAGATTTGCATT 241195
Score = 104 bits (114), Expect = 5e-17
Identities = 146/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
|||||| || || ||||| |||||||| || || | | || | |||||||| | ||
Sbjct 241171 GTGAAGTGTTGATTCTTTCTGAATATTATAGTCAGATAACGTACGGCCATCTTCCAATTG 241112
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || || || || | ||| ||||| ||||| || || ||||||||||||||||||||
Sbjct 241111 CTTTCCGGCAAAAATTAATCGCTGTTGATCTGGTGGGATTCCTTCTTTGTCTTGAATTTT 241052
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|| || || ||||| | || || ||| ||||| | || | || || || ||
Sbjct 241051 CGCTTTCACATTTTCAATAGAATCTGACGATTCTACTTCCAAAGTGATGGTTTTGCCAGT 240992
Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141
| ||||| || || | |||||||
Sbjct 240991 AAGGGTTTTCACAAAGATTTGCATT 240967
>seq1265
Length=163832
Score = 100 bits (110), Expect = 6e-16
Identities = 84/103 (82%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
|||||| || |||||||| || ||||||||||| | || || | ||||||||| | ||
Sbjct 84811 GTGAAGTGTTGACTCTTTCTGTATATTGTAATCAGATAGCGTGCGCCCATCTTCCAATTG 84752
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039
|||||| || || ||||| |||||||| || ||||||||||||
Sbjct 84751 CTTACCAGCAAAAATAAGACGTTGTTGATCCGGAGGAATGCCT 84709
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109141500550475
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