Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_016565.1 Length=18168 Score E Sequences producing significant alignments: (Bits) Value seq2620 1182 0.0 seq2572 942 0.0 seq2740 109 6e-20 >seq2620 Length=5891 Score = 1182 bits (1310), Expect = 0.0 Identities = 2358/3449 (68%), Gaps = 146/3449 (4%) Strand=Plus/Minus Query 2782 TTTAATACTGTAAACGACATAATAAACTATTACAAGGAGA--AAAAACATGGTGAAACAA 2839 |||||| | |||| || || ||||||||||| |||| | ||||||| |||| Sbjct 5520 TTTAATTCAATAAATGATATTATAAACTATTAT--GGAGGTCATAAACATG----AACAG 5467 Query 2840 AATCGTTTAGACATGGTAAGAGATTATCAAAATGCTGTCAATCATGTAAGaaaaaaa-aT 2898 | | |||| || | | | |||||||| | | | || || || |||| || || Sbjct 5466 ACT-----AGACGAAGTCAAACAATATCAAAACG-TATTAAACAAGTTTCAAAAGAAGAT 5413 Query 2899 ACCAGATAACTATAACCAAATAGAATTAGTCAATGAACTCATGAATGATGATATAGACTA 2958 ||| | || || || ||||||||| | | || ||||| ||||| | ||||| || | Sbjct 5412 ACCCAAAAAGTACAATCAAATAGAACTTGCTAACGAACTTATGAACAAAGATATTGATTT 5353 Query 2959 TTACATATCTATTTCAAACCGTTCTGACGGAAAATCGTTCAACTATGTCTCATTCTTTAT 3018 || ||||||||||| |||||||| ||||| ||| | || ||||| | ||||| ||||| Sbjct 5352 TTTAATATCTATTTCCAACCGTTCAGACGGTAAAACATTTAACTACATTTCATTTTTTAT 5293 Query 3019 TTATTTAGCTATAAAACTTGATATTAAATTTACTTTATTATCACGTCATTATACATTACG 3078 | || |||| || | | ||| |||||| || | ||||||| ||||| |||| Sbjct 5292 GAAACTATCTATCGAATTAGGTATAAAATTTGTATTGATTGCACGTCACTATACCCTACG 5233 Query 3079 TGACGCTTACCGTGATTTTATTGAAGAAAT---CATTGACAAAAACCCACTATTCAAATC 3135 | |||| |||||||| | || | |||| ||| || | | ||| || || Sbjct 5232 TAACGCCTACCGTGAACTGATAAATAAAATAGCCATGGAGCATGATG-ACT-TTAAAGAA 5175 Query 3136 TAAG-CGTGTGACGTTCAGAAGTGCTAGAGATTATT-TAGCAATTATCTATCAAGATAAG 3193 ||| | | | || | || | || |||| | | || ||| | | | | ||| Sbjct 5174 AAAGACTTAT----TTATGCAGCG-TACAGATGACTATATTAATGTTGGTT-ATGGTAAA 5121 Query 3194 GAAAT-AGGTGTA--ATTACAGATTTAAATAGTGCAACTGATTTAAAATATCATTCTAAC 3250 |||| | ||||| |||||||| ||||| | ||| ||||||||||||||||| |||||| Sbjct 5120 GAAAGCATGTGTATTATTACAGACTTAAACAATGCGACTGATTTAAAATATCACTCTAAC 5061 Query 3251 TTTTTAAAACACTACCCTATCATTATATATGATGAATTTTTAGCACTTGAAGATGACTAT 3310 ||||||||| | || || |||||| ||||||||||||| ||||| | ||| ||| || Sbjct 5060 TTTTTAAAAGATTATCCAATCATTGTATATGATGAATTCCTAGCATTAGAAAGTGATTAC 5001 Query 3311 TTAATTGACGAGTGGGATAAGTTAAAAACAATTTATGAATCAATCGACCGTAACCATGGT 3370 ||| || || ||||| || | ||||| || ||||| || || ||||||||||| || Sbjct 5000 TTACCAGATGAATGGGACAAACTTAAAACCATATATGAGTCTATAGACCGTAACCACGGG 4941 Query 3371 AATGTTGATTATATCGGCTTCCCTAAAATGTTTTTATTAGGTAATGCGGTCAACTTTTCA 3430 ||| | ||| | | | |||||||| | || ||||||||||| || |||||||| Sbjct 4940 AATATACCCTATTTGGAAATACCTAAAATAGTATTGTTAGGTAATGCAGTTAACTTTTCT 4881 Query 3431 AGTCCTATATTATCCAATTTAAATATATATAACTTATTACAAAAACATAAAATGAACACA 3490 ||||| || | | || ||||| |||| || | | | ||||| ||||| ||| | Sbjct 4880 AGTCCCCTACTTGCGAACTTAAACATATTCAATAAACTTGAGAAACACAAAATCAACTCT 4821 Query 3491 TCACGACTTTACAAAAACAtttttttAGAAATGCGAAGAAATGATTACGTAAATGAAAAG 3550 || | || || | || | |||||| || | ||||| | ||||||||| Sbjct 4820 ATGCGTCAGTATGGTAATGTATTACTTGAAATGAGACGTAATGACAATTCAAATGAAAAA 4761 Query 3551 CGTAACACACGGGCATTCAATTCAAACGATGACGCTATGACAACTGGCGAGTTTGAATTT 3610 ||||| || |||| ||| | || |||| || |||||||| || || ||||| ||| Sbjct 4760 CGTAATACTAGGGCTTTCGACAGTGACAATGATGCAATGACAACCGGTGAATTTGATTTT 4701 Query 3611 AACGAATATAATTTGGCAGATGATAATTTAAGAAATCATATCAATCAAAACGGTGATTTT 3670 ||| | || ||||| || ||||| ||| | |||||||| | | ||||||||||||| Sbjct 4700 AACAATTACAATTTAGCCGATGACGGATTACGCAATCATATTAGTAAAAACGGTGATTTC 4641 Query 3671 TTCTATATTAAAACTGACGATAAATATATAAAAATTATGTATAATGTTGATACATTTAAT 3730 ||||| || ||||| || ||| |||||| ||| | |||||||| || | | || Sbjct 4640 TTCTACATCAAAACCGAAGATGCATATATTAAAGTGATGTATAACGTGAACGACTATACA 4581 Query 3731 GCTAATATCATTGTTATACCTTATACAAAACAATATGAGTTTTGTACTAAAATCAAAGAT 3790 | |||||| | ||||| || ||| || |||||||| || ||||| || | ||| Sbjct 4580 GTTAATATGAAAGTTATTCCATATGCAGAACAATATACATTCTGTACAGAAGTTCGTGAT 4521 Query 3791 ATAGATGACAATGTTATTTATTTAAGAGAAGATATGTTTTATAAAGAAA-ACATGGAACG 3849 | || || || | || ||||||| |||| | || | ||||||||| ||||| || | Sbjct 4520 GTTGAGGATAAAGCTACCTATTTAAAAGAAAACATCT---ATAAAGAAACACATGCAAAG 4464 Query 3850 TTATTATTACAATCCAAGCAATTTACATTTTGATAACGCTTACTCAAAAAATTACGTGGT 3909 || |||| || || || ||||||||||||||||| || |||||| || | || Sbjct 4463 AAAT-ATTATAAACCGTCTAACTTACATTTTGATAACGCCTATTCAAAATCATATATTGT 4405 Query 3910 TGATAATGATAGA-TANNNNNNNNNNNNNNNNaataaaattataaaatttcatataaaaa 3968 | | ||| ||| | || || ||| |||||||||| | || | | Sbjct 4404 TAACAAT-ATACAATACATTGATTTAAACATTAACAAAGTTATAAAATTGTACATTACAC 4346 Query 3969 atgaaatgaagaaaaacatcaac-gaatttgaaagaaaagaaaaaatatacgaagataac 4027 | | | || |||| |||| || ||||||||| | |||||||| |||||||||||| Sbjct 4345 AACAGAAAAAATTAAACC-CAACTGATTTTGAAAGACACGAAAAAATGTACGAAGATAAC 4287 Query 4028 tatataga--gaa-tacgaaaaa----gT--ATCTAATGAGACAATAT---------GAA 4069 |||||||| ||| || |||||| || | | ||||||| ||| ||| Sbjct 4286 TATATAGAAAGAACTAAGAAAAACCTTGTTAAACAAATGAGATTATAATTGCGTGACGAA 4227 Query 4070 A----------TATAA------------------AGGTGTGTAAGATTATGGGATTACTT 4101 | ||||| ||| |||||||| ||||||||| | Sbjct 4226 ACGCAACGTGATATAATTGTTTTATTAGCAATTAAGGAGTGTAAGAC-ATGGGATTATTG 4168 Query 4102 GAGTGTATGCAATATCATAAACATGAACGTAAAATGATATTGTATTGGGATATTGAAACA 4161 ||| |||||| |||||| ||||||||||| || ||||||||||||||||| Sbjct 4167 GAGGCAATGCAAACACATAAAGGCTTACGTAAAATGACGTTATATTGGGATATTGAAACC 4108 Query 4162 TTATCATATAATAAAATAAACGGACACAATAAACCTACACTATATAAAAACGTAACGTAT 4221 ||| |||| || || ||| | ||| || |||| || ||||||||||| ||| Sbjct 4107 TTAGCATACAACAAGATAGAGGGAAGAAAACAACCAACTGACTATAAAAACGTTGTTTAT 4048 Query 4222 TCTGTTGCGATTGGTTGGTTTAATGGTTACGAA--ATTGATGTTGAAGTATTCCCCAGTT 4279 ||| || |||||||| |||| | ||| ||||| ||||| || || ||| || Sbjct 4047 AGTGTAGCTGTTGGTTGGGATAATCA--AGGAACAATTGACGTTGAGGTTTTTCCCTCTT 3990 Query 4280 TTGAAGCCTTTTATGATGATTTTTACAAGTATGTTAATCGCCGTGATACAATCACAAAAT 4339 || | | || | | | || | ||||||| | ||| || ||||| || |||| Sbjct 3989 TTAACTCATTCTTTAAAACATTCTTTAAGTATGCAGAACGCAAAGACACAATAACGAAAT 3930 Query 4340 CAAAAACAAATATTATCATGATTGCACATAACTGTAATAAGTATGACAACCATTTTTTAC 4399 | ||| ||| |||||||| ||||||||||||||||||||||| || ||||||| Sbjct 3929 CTCGTACATCAATTGAAATGATTGCGCATAACTGTAATAAGTATGACAATCACTTTTTAC 3870 Query 4400 TTAAAGATACCATGCGTTATTTTGA---TAATATCACACGTGAAAATATATATTTAAAAT 4456 || | |||| | | || || | |||| | | | ||||||| | | | |||| Sbjct 3869 TTCACGATA---TACAACATATTTACCCTAATGTAAAAGTTGAAAATTTGTTCATGAAAT 3813 Query 4457 CTGCAGAAGAAAACGAACACACACTAAAAATGCAAGAGGCTACTATTTTAGCTAAAAATC 4516 | |||||| ||| ||| |||| | || ||| |||| |||| | |||||| | Sbjct 3812 CAGCAGAAACAAATGAAAACACTGTTAATATGAAAGAAGCTAAAACAGACGCTAAAGAAG 3753 Query 4517 AAAATGTGATTTTAGAAAAACGTGTGAAATCGTCTATTAATTTAGACTTAACAATGTTTT 4576 | ||| | |||||||||||||||| ||||| || |||||||||||| | | | || | Sbjct 3752 ATAATATTGTTTTAGAAAAACGTGTTAAATCTTCAATTAATTTAGACCTTATTTTTTTCT 3693 Query 4577 TAAATGGTTTTAAATTTAATATCATTGATAACTTTATGAAAACCAATACATCAATAGCAA 4636 || | |||||||||||| | |||||||||| |||||||| | ||||| || || | Sbjct 3692 TACAAGGTTTTAAATTTGTCGTTGTTGATAACTTCATGAAAACAACAACATCTATTGCCA 3633 Query 4637 CATTAGGTAAGAAATTACTTGACGGGGGTTATTTAACAGAAAACCAACTTAAAACAGATT 4696 ||||||| || ||| | ||||| || ||| | ||| | |||||||||||||||| | Sbjct 3632 CATTAGGAAAAAAACTCAAAGACGGTGGATATCTTACATCAGACCAACTTAAAACAGACT 3573 Query 4697 TTAATTATACAATTTTTGATAAAGATAACGATATGTCAGATAGTGAAGCCTATGACTATG 4756 || | ||| || ||||||| || | |||||| ||| ||| |||| || | Sbjct 3572 TTCAATATGATATCTTTGATATTGAAGAGGATATGGATGATGTAGAAAGTTATGCTTACG 3513 Query 4757 CTGTTAAGTGTTTTGATAATCTTACATC-TGAACAATTAACATACATTCATAATGACGTG 4815 || | | |||||| | || || | || ||| ||| | || |||||| | |||||||| Sbjct 3512 CTTATGAATGTTTTAAAAAACT-AGATAATGACCAAATGACTTACATTAACAATGACGTT 3454 Query 4816 ATTATATTAGGTATGTGCCATATTCATTATAGTGATATATTCCCAAATTTTGACTATAAC 4875 ||||| |||||| || ||||| |||||| ||||||||||||||| ||||| ||| Sbjct 3453 ATTATTTTAGGTCAATGTCATATACATTATTCTGATATATTCCCAAACTTTGATTATTCA 3394 Query 4876 AAATTAACATTTTCATTGAATATTATGGAATCTTACTTGAATAACGAAATGACACGTTTT 4935 ||| | || ||| | || || | ||| ||| |||| || || | || ||||| Sbjct 3393 AAAATGACGTTTAGTGTAAACATCTTAGAAAGTTATATGAACAATGATTTTACCGGTTTT 3334 Query 4936 CAGTTACTTAATCAATATCAAGATATTAAAATATCTTATACAC--ATTATCATTTCCATG 4993 || |||||||| || || | | || | ||| | |||||| ||||| |||| |||| Sbjct 3333 CAACTACTTAAT-AAAAT-AGGCGATGGACGTATTTCATACACAGATTATTATTTTCATG 3276 Query 4994 ATATGAATTTTTATGACTATATTAAATCATTCTATCGTGGTGGTTTAAATATGTATAACA 5053 | || ||||||||||||| ||| || || |||||||||||||||||||||| Sbjct 3275 GTCGTAACCTTTATGACTATATCAAAGGTTTTTACAATGGTGGTTTAAATATGTATAACC 3216 Query 5054 CCAAATACATCAATAAACTTATTGATGAGCCATGTTTTTCAATTGATATTAATTCGAGTT 5113 | |||||||| || ||||| ||||||| |||||||| |||||||| |||||| | Sbjct 3215 CTAAATACATTGGACAAATTATTAATGAGCCTTGTTTTTCTATTGATATAAATTCGTCAT 3156 Query 5114 ATCCTTATGTGATGTATCATGAGAAAATTCCGACTTGGTTATACTTTTATGAACACTATT 5173 |||||||||| ||||||||||||||||| || |||| |||| | |||||| | | | Sbjct 3155 ATCCTTATGTAATGTATCATGAGAAAATACCAACTTACTTATCTTCTTATGATGAATTTG 3096 Query 5174 CA---GAACCAA-CGTTAATCCCTACTTTTTTAGATGATGACAATTATTTTTCATTATAT 5229 | ||| ||| |||| ||||| |||||| || | || | || || | || Sbjct 3095 AAAGTGAAACAATCGTT----TCTACTAACTTAGATAATTATGATAAATTCACACTTTAC 3040 Query 5230 AAGATTGATAAAGATGTATTTAACGATGATTTATTAATTAAAAT--TAAATCACGTGTAT 5287 || || ||| | ||||||| |||| | || || | || || | | || || Sbjct 3039 AAAATGACGAAACAATCATTTAACTTTGATATTTTGTTTCATATAGAAAGTGATATG-AT 2981 Query 5288 TACGTCAAATGATTGTAAAATACTAT------------AATAACGATAATGATTACGTTA 5335 || | | || |||| ||||||||| || | ||||| || || ||| Sbjct 2980 TAAG-AAGATACTTGTTAAATACTATGCCACTGCATTAAAAGAGGATAAAGACTATATTA 2922 Query 5336 ATATCNNNNCANATACATTAAGAATGATTCAAGACATTACGGGTATTGA-TTGT-ACGCA 5393 |||| || | || ||| | |||||| | || | || | | || || | ||||| Sbjct 2921 ATATTAATACAAACACTTTACGTATGATTGAGGATTTAACCGACCTAGACTTATCACGCA 2862 Query 5394 TATACGTGTCAATTCGTT-TGTAATATATGAATGTGAATACTTTCATGCACGTGATATTA 5452 ||| | || ||| | ||| | ||| |||||||| ||| ||| | ||||| | Sbjct 2861 TAT---CAACCATGAGTTATTTAACTTTTGACTGTGAATATTTTGGTGCTAGGGATATCA 2805 Query 5453 TTTTTCAAAATTATTTTATTAAAACACAAGGTAAGTTAAAAAATAAAATCAATATGACAT 5512 | |||| ||||||||||||||||||||||| | |||| ||||| ||||| | Sbjct 2804 TACACGAAAACTATTTTATTAAAACACAAGGTAAACTCAAAACCAAAATAGATATGCCTA 2745 Query 5513 CACCTTACAACTATCATATCACTGATGACATCAACG-AACA-CCCATACTCAAATGAGGA 5570 ||||||| ||||| ||||| || || || | |||| ||| | |||| || Sbjct 2744 CACCTTATGACTATACAATCACAGACGAGCCAAATGAAACAGTTTATAGT--GATGAAGA 2687 Query 5571 GGTTATGTTGTCAAAAGTAGTACTCAATGGTTTATATGGTATACCTGCATTACGTTCACA 5630 |||||||| |||||||| ||||| ||||| ||||||||||| ||||| |||||||||| Sbjct 2686 AGTTATGTTATCAAAAGTTGTACTTAATGGATTATATGGTATTCCTGCCCTACGTTCACA 2627 Query 5631 TTTTAACTTATTCCGTTTAGATGATAACAATGAACTATACAATATTATTAACGGTTATAA 5690 ||||| ||||||||| |||||| || | |||| || || ||||| ||||| || Sbjct 2626 CTTTAATTTATTCCGTAAAGATGAAGACGGTTTTTTATATAACATGATTAATGGTTACAA 2567 Query 5691 AAACACAGAACGTAATATTTTATTTTCTACATTTGTAACATCACGTTCATTGTATAACTT 5750 ||| |||||||| ||||| ||||| ||||| ||||| || |||| ||| | ||||| | Sbjct 2566 AAATACAGAACGAAATATATTATTCTCTACCTTTGTTACGTCACAATCACTTTATAATCT 2507 Query 5751 ATTAGTACCATTCCAATATTTAACGGAAAGTGAAATTGACGACAATTTTATTTATTGTGA 5810 | | | ||||| ||| | ||||| ||| |||||||||||||| ||||| || ||||| Sbjct 2506 ACTTGAGCCATTACAAGACTTAACACAAAAAGAAATTGACGACAACTTTATATACTGTGA 2447 Query 5811 CACTGATAGTTTGTATATGAAATCCGTTGTTAAA-CCCTTATTGA-ACCCCAGTTTATTC 5868 || |||||||| ||| | ||||| | ||||| ||||| | || || ||| Sbjct 2446 TACAGATAGTTTATATCTTAAATCAGCGATTAAAGATAAGATTGACGCTTCAATT--TTC 2389 Query 5869 GACCCGATAGCCTTAGGTAAATGGGATATTGAAAACGAACAGATAGATAAGATGTTTGTA 5928 ||||||||| | |||||||||||||| |||| || || | || || || |||| |||| Sbjct 2388 GACCCGATATCGTTAGGTAAATGGGACGTTGAGAATGACCGTATTGAAAAAATGTATGTA 2329 Query 5929 CTGAATCATAAAAAATATGCATA---TGTAACGAATGGTAAGATTAAAATAGCCTCTGCT 5985 | || ||||| |||||||| || | | | || || || || | |||| || Sbjct 2328 TTAAACCATAAGAAATATGCTTACCTTAAACCAAACGGAAAAATCCATGTAGCAAGCGCA 2269 Query 5986 GGTATACCGAAAAACGCCTTTGATACA-AGCGTCGATTTTGAAACCTTTGTACGTGAACA 6044 ||| | ||| | |||| ||| | ||| ||| | || || |||| | | | | Sbjct 2268 GGTGTGCCGTTAGACGCGTTTAACACAGAGCAATCA-TTCGAGGACTTTATTAATAATGA 2210 Query 6045 ATTCTTTGACGGTGCCATTATTGAAAACAATAAAAGTATCTATAATGAGCAAGGTACAAT 6104 || | ||||||| |||| | || |||||||||||||||||| | |||||||| || Sbjct 2209 CTTTCATCACGGTGCTGTTATCTACAATAATAAAAGTATCTATAATAAACAAGGTACCAT 2150 Query 6105 ATCGATATATCCGTCTAAAACTGAAATTG 6133 || ||||||||||| |||| | |||| Sbjct 2149 TTCAATATATCCGTCAGAAACACATATTG 2121 Score = 104 bits (114), Expect = 3e-18 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 7968 AATTTATCTTTAATTTGTTCTGGCACTAACACGTCCATTTCTGCACAATTTTCTACGATA 8027 ||||||||||||||||||||||| | | || | ||||||||| ||||||||| ||| Sbjct 154 AATTTATCTTTAATTTGTTCTGGAAATGGTACATTCATTTCTGCTAAATTTTCTAATATA 95 Query 8028 GATAAGCCCTCATTAGCGATATAATAGAAAATCGTAATCATGAGTAACCCACCTTTTAAT 8087 ||| ||||| |||| || |||||||| || ||| || | ||| |||| ||||| Sbjct 94 CTTAAACCCTCTGTAGCAATGTAATAGAACATGATAACTATTACTAATGCACCGTTTAAG 35 Query 8088 TGTAAAATCTGGTCAATGATGTTTGCTAAAAT 8119 | ||| || | |||||| || || | || ||| Sbjct 34 TTTAATATGTTGTCAATAATATTAGATATAAT 3 >seq2572 Length=8270 Score = 942 bits (1044), Expect = 0.0 Identities = 1529/2163 (71%), Gaps = 73/2163 (3%) Strand=Plus/Minus Query 14834 CAAACGCTTCAACTGTTTGTCTGTTGATTTCTCTATCTAAAAAGTGTATTGTAAATGATT 14893 |||| | ||| || |||||||| | || ||||||||||| || || | |||||||| Sbjct 2141 CAAAGGATTCGACGGTTTGTCTACTAATCTCTCTATCTAAGAAACGTGTAACAAATGATT 2082 Query 14894 TTTTGAAAAGTAA--GTCAGATAAGT-CATCTTTAAGTTTAAAACCTTTAAACACTTTTT 14950 ||| ||| ||| |||| ||| || | ||| ||| | ||| |||||||| | ||| Sbjct 2081 GTTTAAAA--TAACGGTCA-ATATGTTCGTCTGTAAAGTGAAATCCTTTAAAAAAGGTTT 2025 Query 14951 CATTAACGATTGATAAAACGTCTTTGTCAAACTTCAACATTTTTTGCATGAATTGAAATT 15010 | | |||||| | ||| || | |||||| || || |||||| ||||||||| | | Sbjct 2024 CGTCTACGATTTTTTTAACATCATCGTCAAAACGCATCACTTTTTGAATGAATTGATAAT 1965 Query 15011 CATCATCATAAAACGTTAATTTATCATTATTTACAAATTCGTTAAAACCTTTTTTAATTA 15070 || | || || ||||||| | ||||| |||||||| ||||| |||||| || || Sbjct 1964 CAAAGTTATCAATGGTTAATTGTCCGTTATTAACAAATTCATTAAATCCTTTTCTATCTA 1905 Query 15071 ATTCTGATTTAATAAAATCAAATAAAGTCATTGTATATCTAGCCA-TTGTATTCACTACT 15129 |||| | ||| | |||||||| || ||||||||||||||| ||||| || | Sbjct 1904 ATTCACTCTCAATGATTTCAAATAAGGTTGTTGTATATCTAGCCACTTGTACCACCTCCG 1845 Query 15130 T--TCGTCATTAGACAA----TGAATCTATCATTGTGATTTCTGAAGTAACTTCATCGTC 15183 | | ||| ||| || ||||| ||| || || ||| || ||||||| || Sbjct 1844 TAGTTGTCGGTAGCCATGTTTTGAAT--ATC-----GACTTGTGATGTTGCTTCATCATC 1792 Query 15184 GTAATACGGTT-TAATGTCTAAACCATAACGTTTTGATAAGAATGTAATCGGTTCACGAC 15242 ||||| || | |||| ||||| || |||||| ||| | | || |||||||| Sbjct 1791 ATAATAAGGGTGTAAT-TCTAACCCGAAACGTTGGTTTAACATTTCTATACTTTCACGAC 1733 Query 15243 CTTTTAAATAAATATTACTATTAGATGTAGTAAAACCTCGGTTACTTTTTGCCTCTTCGT 15302 || |||||||||| || ||||| || ||||| |||||||||||||| ||| | Sbjct 1732 CTCTTAAATAAATGTTTGAGTTAGACGTTGTAAATGAACGGTTACTTTTTGCTTCTGTAT 1673 Query 15303 CCGAAACACCGCTTTCCTTATCCACTGCTAGTGAATTAATACCTAAATAGTTACTTAATT 15362 | ||||||||||| ||||| || |||| || |||| |||||| ||||| || || Sbjct 1672 CACTCACACCGCTTTCTTTATCAACAGCTAAAGAGTTAACACCTAAGAAGTTAGATAGTT 1613 Query 15363 CACTAATTTTATTTTGGTATTCTCTTTTCATCTCAGTTAGTGCTGGAATCACACTATTAC 15422 |||| ||||| ||||| ||||||| |||||| ||| ||||| | || || || Sbjct 1612 CACTTATTTTGTTTTGATATTCTCGTTTCATTTCAACGAGTGCATTGTTAACGTAATCAC 1553 Query 15423 TGGTTAAATCTATGATATCATCATCGGCGTTAAACATAGGTGACAT--TTTAACAAATGG 15480 | | ||| ||||| || || || || || | ||| || || | ||||| || || Sbjct 1552 TTGCTAAGTCTATAATGTCCTCTTCAGCATCAAA--TAATCCACTTACTTTAATGAAAGG 1495 Query 15481 TGCACCGTTGTAT-ATTTCCGATACAAGTTGGTTAACTGATTCATCGTTAATGTCTGATT 15539 || || || | | || | | | ||| |||| || ||||||||||| || |||| Sbjct 1494 TGAGCCATTAAAACAATTGAGTGATGAATTGATTAATTGTTTCATCGTTAACTTCCGATT 1435 Query 15540 TAAATATTTTGCTAAATTTTGCTTGCATAATTAATGAGAATCGAGATAAAACAACCTCAG 15599 | |||||||| |||||| | ||||||||| | ||| || ||| ||||| | || | Sbjct 1434 TGAATATTTTAGCAAATTTGGATTGCATAATAAGTGAAAAACGACTTAAAATGATTTCTG 1375 Query 15600 ATAATTCATCAGTATAATGTTCTATAATTTCTATA-TCACTATTATATTGA-ATGGGTTT 15657 |||||||||| ||| ||| |||||| | ||| ||| |||| || || | ||||| Sbjct 1374 CTAATTCATCACAATAGTGTGAAATAATTGC-ATAGTCATTATT-TAGTGTTACTGGTTT 1317 Query 15658 ATTTTGCATAACAACAAAGTTACCACTCATACAGTTATCATA-TATTTTATGAATCTGTA 15716 |||| |||||||| ||| | ||| |||| || ||||| |||| ||| ||| | Sbjct 1316 ATTTCTCATAACAATAAAATCACCTGATTTACAATTGTCATAATATTGTATT--TCTA-A 1260 Query 15717 AGCATTCATCTGGTATTAAATAGTCTGGGACAATGAAATAAATATCTTCTTTTGTTAATC 15776 ||| | ||| || ||| || | || | | | ||| || |||| | |||||| Sbjct 1259 AGCGTA-ATCAGGGCGTAAGTATTTAGGAATAGTAAAACGTATGTCTTTCTCGTTTAATC 1201 Query 15777 GTTTTTGAAATTGTAAGTTAAAGTTTGATGAAAAATTTGGGGCT-TGATTAAAGTAAGTA 15835 | || ||| ||||||||||| | ||||| | || | ||| | | | || Sbjct 1200 GGCGTTCAAAAGCAAAGTTAAAGTTATTT-AAAAAGTCACCACTATTTTTATAATGATTA 1142 Query 15836 TTATTTACGTAACCAAGAATCATAATTTGTTCATTTCTTGCCTTGCCAACCACTACATTG 15895 || | || ||||| || ||||||||||| |||||||| ||||| ||||| ||||| | | Sbjct 1141 TTTTCTATATAACCTAGTATCATAATTTGGTCATTTCTAGCCTTACCAACAACTACCT-G 1083 Query 15896 ATGTT-TTGTCTTAATGCTGATTCTAATTGAATAAAATCTATACCAACCGTATCACGATT 15954 || ||| | |||||| | ||||||||| | |||||||||| || || ||| Sbjct 1082 ATAACCTTGACGTAATGCAGTTTCTAATTGTAAAAAATCTATAGACACGCTACGTTTATT 1023 Query 15955 GGTATAGTTGATGAGTAGTGGTAAAAATTCCAAATAACGATTAAACATAAGACGTTTAAA 16014 |||||||| || ||||| |||| ||||||||||||||||||||| ||||| | ||| Sbjct 1022 TGTATAGTTAATCAGTAGGGGTAGAAATTCCAAATAACGATTAAAAATAAGCCTACGAAA 963 Query 16015 TCTGTTGCGATGTTCAACAACTCTTTTGTTGATTTCTTTTGATAATTCAACCTGTACGCC 16074 || || | |||||| | ||| | | | || || | ||||| || | ||||| Sbjct 962 TCGATTTCTATGTTCGATAACACGCAGGCTTATGTCCTCAGATAACTCTGTTTCAACGCC 903 Query 16075 ------TT---TATT---ATGT------TTAGTCAT-TTATAGCACCTCTA---TTATTC 16112 || |||| |||| || ||||| ||| || ||| || |||||| Sbjct 902 AACATGTTCACTATTTGAATGTGATAGATTTGTCATGTTAACGCTCCTTTAAAGTTATTC 843 Query 16113 T-----GTTCTT-GGTGTTACATCTTGGTC---AGTAATTAAAATTTTATTAAAGAATGG 16163 | || || ||| | | || | || ||| ||||||||||| || |||||||| Sbjct 842 TTCTGGGTCCTCAGGTTGTTCCTCAGGCTCTGAAGTGATTAAAATTTTGTTGAAGAATGG 783 Query 16164 GCTAATGGCTTTAAATGAATAGTAATGAATCCAGTGTGTGACTTCATCAAATTCACCATT 16223 || | ||| || || || || ||||| ||||| ||||||||||||||||| || Sbjct 782 TGAAACAGATTTGAAGCTGTAATAGTGTATCCAATGTGTAACTTCATCAAATTCACCGTT 723 Query 16224 ATAGAATGGTTGTTTTAACATTCCTTTTGTGTAACGTTTATATTTAATTGAATTAATATC 16283 ||||||||||| ||| | ||| || ||||| | |||||| ||||| | | |||||||| Sbjct 722 ATAGAATGGTTTTTTAAGCATACCGTTTGTATTACGTTTGTATTTCAAAGCGTTAATATC 663 Query 16284 CAAAATAAAAGCGTATAAATCTGATTTTGGTTTAATTTCTTCAACACTATCTTTAAATTC 16343 ||||| |||||| ||| || | ||||||| ||| ||| || | |||||| Sbjct 662 GAAAATGAAAGCGAATAGGTCACTATCAGGTTTAACCTCTGTTACATTACCAACAAATTC 603 Query 16344 AGATAGTTTTGATACATCATAAGTGAATACTGAACCAACTGGAATTGTATCACCTTTATG 16403 || | ||| ||| | ||| |||| || || ||| | || || ||||||| | || Sbjct 602 AGTTTGTTGTGAAATGTCAAAAGTAAAAGTTGTACCCTCAGGGATAATATCACCAATTTG 543 Query 16404 AGTTTGATAATCACCGTAAGCACGTAAGAAATTAACTGATTCATCACTTGATACGACAAT 16463 || ||||||||||||| || |||||||| | | | || |||| | || | Sbjct 542 AGCTTGATAATCACCGAAACCACGTAAGTAGGTGATTGTGTCATTTTCTTCTAATGTTAC 483 Query 16464 ATCTTTAGTGACTTTAAAAACACCGCCTAGGTCGTCAAAACTGATAACGTGGTCTGTAAA 16523 ||| | ||| ||| | |||||||||| ||||||||| || || || ||||||||||| Sbjct 482 ATCATCAGTTGTTTTGTACACACCGCCTAAGTCGTCAAAGCTAATTACATGGTCTGTAAA 423 Query 16524 GTCAATCCCTGCTACTTGGAATGTGTTCGCAATCTTTGTATCTAA-AAGATAAGATTTTA 16582 |||||| |||| | ||||||||||||| ||||| ||||||||||| |||| | ||||| | Sbjct 422 GTCAATGCCTGATGCTTGGAATGTGTTAGCAATTTTTGTATCTAATAAGA-ATGATTTAA 364 Query 16583 AGCTATCAGTTGTTAAAATAACAATATCTTTTAATTTTGAAACTGTTGTATATTGTCCGA 16642 ||||| |||||||||||| ||||||| ||||| ||||||||||| || | || | Sbjct 363 TACTATCTGTTGTTAAAATAGCAATATCAGACAATTTAGAAACTGTTGTGTAACGACCAA 304 Query 16643 TAGCACCACCTGAAGCACGATGAACTTCATTATATTTAGCGCTGTTGTTTTGTAAGTTAA 16702 | | |||||||||||| || | ||||||| ||||| | ||||| ||||| | ||| | Sbjct 303 TTGACCCACCTGAAGCAGTATTAGCTTCATTGTATTTGTCACTGTTATTTTGCATGTTTA 244 Query 16703 GAATAGCTTCAAAAACTTTACTTGCTAAATCTTCTTTTGATGTTGCTTTACGTACATTTG 16762 | | ||||||||| |||||||||||||||||||||| |||||| || | ||| | ||||| Sbjct 243 GTACAGCTTCAAATACTTTACTTGCTAAATCTTCTTGTGATGTAGCGTAACGAATATTTG 184 Query 16763 ATTCAGATAATTGATTCAATGAGTAATCAACTAACATTGCACGCATTTCTTTTTCTTCTA 16822 | ||||||||||| || | || || ||||| | ||| ||||| ||||||||||||||| Sbjct 183 AGTCAGATAATTGGTTAATTGCATAGTCAACAACCATGGCACGGATTTCTTTTTCTTCTT 124 Query 16823 ATACGTTAATATCAGAAATTTTCTTTTTATAGACACCTAATGCATAATTAGTAGCGTCTG 16882 |||||||||||||||||| || || || | || ||| ||||| || |||||||| Sbjct 123 CTACGTTAATATCAGAAATCTTTTTCTTCAATACTGCTAGGGCATAGTTTGTAGCGTCAC 64 Query 16883 CTAATGTTTGGAAATTGAAACGTGTGTCATTGTTATTTAATGTAAATTTTTGTTTCTTCA 16942 |||| || ||| || ||||||| || || ||||||||||||||||||||||| || | Sbjct 63 CTAAGTCTTTGAAGTTAAAACGTGCATCGTTATTATTTAATGTAAATTTTTGTTTTTTAA 4 Query 16943 CAA 16945 ||| Sbjct 3 CAA 1 Score = 646 bits (716), Expect = 0.0 Identities = 1046/1484 (70%), Gaps = 33/1484 (2%) Strand=Plus/Minus Query 8603 GGTACACTAATTTTCATCGTTAAACCGTTAATACTGTTTGCAATTTGGAATGCGTTTCCC 8662 |||| || |||||||| ||||||||||||||||| || ||||||||||| || || ||| Sbjct 8188 GGTATACCGATTTTCATTGTTAAACCGTTAATACTATTCGCAATTTGGAAAGCATTACCC 8129 Query 8663 ATTTCTGATTCAGTCACTGACGGTGGTTGTAATGCTAAATCTTTATATTCTGCTTGTTGT 8722 |||| | ||| ||||||||||||||| |||| |||||||||||||||||||| Sbjct 8128 ATTTGACTTGAAGTTGTTGACGGTGGTTGTAAAGCTAGGTCTTTATATTCTGCTTGTTGG 8069 Query 8723 TGTTTGTAGAAATTATATTCTTCATTAAACTTACCAAATAAAGCAGTCGGACTTAAATTA 8782 | || || | | ||||| |||||||| |||| |||||| ||||| || | ||| Sbjct 8068 TTTTGATAATATGTGTATTCATCATTAAATTTACTAAATAATTGTGTCGGGCTGATATTG 8009 Query 8783 CTTGCTACACTTACTGCGTCATAAAAACGTGATTTTGGGTCGCTACCATTTAATACATTA 8842 ||| | |||| | | ||||| || ||||| |||| ||| | | ||| Sbjct 8008 GATGCAATACTTGCCACATCATAGAATTTAGATTTAATGTCGTCACCTGTAGCAATATTT 7949 Query 8843 TCTATACGACTTGTAATTAATTGACTTTCAGCATTTCGCTGTCTATTGGCTTGTTGTGAT 8902 | |||| |||| |||||||||||||| |||||| | | || |||||||||||| Sbjct 7948 TGCGCACGATTTGTTATTAATTGACTTTCTGCATTTTTCACACGGTTAGCTTGTTGTGAT 7889 Query 8903 TGTCCTAAAATACCGTTATTGATTAAAATTGGTACTTGTGCAAAACTATTAAATGTTATA 8962 |||||||| ||||| |||| ||||| | |||||||| ||||| |||| |||||| || Sbjct 7888 TGTCCTAATATACCATTATCAATTAACACTGGTACTTCAGCAAAGCTATCAAATGTAATT 7829 Query 8963 TTTGTATTTAAGAATGAACCTGTATCAATTAATATATCTTTATTTTTTGCAAGTATTGGT 9022 || ||||||||||| ||||| || || ||||| || ||| ||| | || ||| Sbjct 7828 GCAGTGTTTAAGAATGACCCTGTGTCTATCAATATCTCACCATTGGTTG-ATTTAATGGG 7770 Query 9023 CTATCGTTTTCTGCAC---TGTTATAATCTACTGGATATACTCGAACTTCATTATGATAA 9079 | | | | || ||| ||||||| || || ||||| | || ||||||||||||| || Sbjct 7769 TTGT--TCTGCTTCACCTTTGTTATAGTCAACGGGATAAATTCTAACTTCATTATGAAAA 7712 Query 9080 CCAATGATTGATTTTGTACGTAACTTAACACCTGTTTTTTGTGAAATTTTGCCAGCGTCT 9139 || || |||||||| || | ||||| |||||||||| ||| || || || |||||| Sbjct 7711 CCGATAATTGATTTCGTTCTAAACTTCACACCTGTTTCGGGTGTTATCTTCCCTGCGTCT 7652 Query 9140 AGTAACATTGTATTACCATTCCAGTCATAAAACTCAATCGTCATATACTCATTACGTATC 9199 | |||||| | | ||| ||||| ||||| || || || | ||| |||||||| | Sbjct 7651 AATAACATAGCGTCACCGTTCCATGAATAAACTTCTATTGTAAAATATTCATTACGGACT 7592 Query 9200 ATATGTTTAAATTCATCTTTTTTAGATAACATCATCTCTTGAAGCTTTG-TGAAACTTAA 9258 | ||| | |||| || || |||| | | || || || | | ||||| | Sbjct 7591 AAATGACGTAGTTCAGGTTGATT-GATACCTGCTAAATTTAAAAATTCGTTAAAACTCAT 7533 Query 9259 TGATAAATCGTTTAAACTCCATTCTTTTGATTTTCCACCTTGTTTTAAGGTTTTTAACCC 9318 ||||| || |||| ||| || ||| |||||| || || || || Sbjct 7532 ATTTAAATTAGGTAGTGACCATGTTTTAGAACGGCCATTACTTTTTAATGTGTTCAATCC 7473 Query 9319 AGTAATATTTTCACTTGTTTTAACGTCCTCTAAATCTTTTGTGTTAATAAAGTCTTTAGG 9378 |||||| |||| ||||| || ||||||| | | | |||||| | || ||| Sbjct 7472 TTTAATATCTTCATCGGTTTTGACACTTACTAAATCACTACTATCAATAAACTTTTCAGG 7413 Query 9379 TAACATTTGAACCTTTTGAAAGTTTTGGGTAATCCATGGATATGCACTCATTTTATCCAT 9438 || |||||| | ||||| |||||||| ||||||||||| ||| |||||||||||||| Sbjct 7412 TATCATTTGTATTTTTTGGAAGTTTTGAGTAATCCATGGGTATTTGCTCATTTTATCCAT 7353 Query 9439 AAAGTTAATAAAGTCACCATATTCCATAACGTATAAGTTGACTGGTGATGTGATATTGTC 9498 ||| |||| ||| | || | ||| | |||||| || ||||| || |||| ||| Sbjct 7352 AAAATTAACAAAATTTGAATGTGACATGATGTATAAATTAACTGGACTCGTCATATAGTC 7293 Query 9499 ATATATCGTACCTTTAGACGTATCTAAGTTTGGCTCTTTTTTCGTACCAAATTTCTTTGA 9558 ||| | ||||| || ||||||| || ||||||||||| |||| ||||| || || Sbjct 7292 ATAAGTTAATCCTTTTGAACTATCTAAATTAGGCTCTTTTTTACTACCGAATTTTTTAGA 7233 Query 9559 TAAATCAGCGCTTGACTGGA--ATAACACTAAAT-TTTCCAAATACTGTTGCATTTGGTT 9615 ||| ||||| ||||| || | |||||| || | || |||||| |||| | | ||| Sbjct 7232 TAAGTCAGCACTTGATTGAAACATAACA-TAGTTGTTACCAAAT--TGTTCTAAGTAGTT 7176 Query 9616 ATACACATAGTTTTTATTCGATACTTTTAATACATCATCATTGTTACGTAACATTGGTAA 9675 ||||| |||||| | |||| |||||||||||||| |||||||| ||||| Sbjct 7175 TCTTGAATAGTATTTATTTGTCGCTTTCAATACATCATCATTATTACGTAAATAAGGTAA 7116 Query 9676 CATATAGTTATACGTACGCTTTGATAAGTGTTGACGTTCAATATTAACG-TTTGAGAGTT 9734 ||| || | ||| | |||| ||| ||||||||||| | | || ||||| ||| Sbjct 7115 CATGTATTCATATTGAGATTTTGGTAAATGTTGACGTTCCACACGTGCGTTTTGAATGTT 7056 Query 9735 GCTCTAATACATTACCTTGTGTATACGTCATAATAGTATCAATCACAAAATATATTTTTA 9794 ||| ||||||||||||||||| ||||| || || ||||| || ||| |||| | Sbjct 7055 -AGATAAAACATTACCTTGTGTATAAGTCATGATTGTGTCAATAACCAAAGTCATTTGAA 6997 Query 9795 CCACAACATCATTCACGTATTCGATTTGATTCACAAAAGCGTAATAGCGTCTGTCCTCAA 9854 ||| ||| || | ||||| || ||| |||||||||||||| ||||| | ||||| Sbjct 6996 TTACATTATCGTTAATATATTCAATCGCATTAACAAAAGCGTAATAACGTCTATTCTCAA 6937 Query 9855 AATCTGATAAAAACGTCATGTAGTTAATCCCTTGTGCGTCATGCCACTGCATAT---CAA 9911 | ||||| ||||| |||||||| ||||| || ||| ||| | ||| | | Sbjct 6936 ACCCTGATTTGAACGTACAATAGTTAATACCTTGAGCTTCACTCCAATTCATTTGTGGTA 6877 Query 9912 CATTGATTTCCAT---TCTATCACGTATAAAATTATATGG--TTGTTTGGAATAGTCTAA 9966 | || | | || | || |||||||||||| |||| || ||| | | |||| Sbjct 6876 CTTTAA---CAATGGAGCGGTCGCGTATAAAATTAAATGGGATTTTTTCGTA---ACTAA 6823 Query 9967 -TGATTTAAAATGACGACCGTTTAAAAAATAATCATCACGCTCTTTATTACTATTAAAAT 10025 || ||||||||| | ||| ||| |||| ||||||||||| | |||||| |||||| Sbjct 6822 TTGCTTTAAAATGTCCACCATTT-AAAAGTAATCATCACGTTGCGCATTACTGCTAAAAT 6764 Query 10026 GAATCGTATTTTGATAGTCTG-TAAACGGCGTGTTATAGAAAAA 10068 | ||||| |||||||| |||| |||| || |||| ||||||||| Sbjct 6763 GTATCGTGTTTTGATAATCTGTTAAAAGGTGTGTCATAGAAAAA 6720 >seq2740 Length=4841 Score = 109 bits (120), Expect = 6e-20 Identities = 197/282 (70%), Gaps = 6/282 (2%) Strand=Plus/Plus Query 7954 TTTTAATTACTCTTAATTTATCTTTAATTTGTTCTGGCACTAACACGTCCATTTCTGCAC 8013 ||||||| ||| | ||| || ||||| | || ||||| || ||||||| || | Sbjct 1255 TTTTAATAACTTGAAGTTTTTCAGCAATTTCCTTAGGAACTAATACACCCATTTCAGCGC 1314 Query 8014 AATTTTCTACGATAGATAAGCCCTCATTAGCGATATAATAGAAAATCGTAATCATGAGTA 8073 |||||||||| || ||| || ||||| || | ||||| | | |||||||| | | Sbjct 1315 AATTTTCTACAATGCTTAATCCTTCATTTGCTAAGTAATAAAGTAATGTAATCATTAACA 1374 Query 8074 ACCCACCTTTTAATTGTAAAATCTGGTCAATGATGTTTGCTAAAATGATAATACAGAATA 8133 ||||| |||| | | || || || || || || |||||||| |||||||| |||| Sbjct 1375 GTCCACCATTTAGCTCAAGTATTTGATCTATAATATTAGCTAAAATAATAATACA-AATA 1433 Query 8134 TCAATAattttttagcaaaacctttcattgattttttagaccatagattattatttttaa 8193 ||| | |||| | || ||||| ||| ||||| | |||| || ||| |||||| Sbjct 1434 TCATCATTTTTCTCGC-AAACCAAACATGGATTTACGACTCCAT--ATGATTTGTTTTAA 1490 Query 8194 ttgctttagCGAAACCAGTAACAATATCAACAATCATCAAAA 8235 |||||| || | |||||||| ||||| | | ||| |||| Sbjct 1491 ATGCTTTTGC-CATCCAGTAAC-ATATCTAAATCCATTAAAA 1530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 58003149985525