Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_018275.1
Length=39783
Score E
Sequences producing significant alignments: (Bits) Value
seq2959 313 6e-81
>seq2959
Length=4395
Score = 313 bits (346), Expect = 6e-81
Identities = 453/626 (72%), Gaps = 20/626 (3%)
Strand=Plus/Minus
Query 31999 GCGCGGTGTGTTGATTTTCTCGATGGAAATGAGCGCCATTCAGGTTGTTGAGAGAGGGAT 32058
|||||| ||| |||||||| ||||||||| ||| | |||| |||| ||| | | |
Sbjct 1110 GCGCGGCGTGCTGATTTTCAGCATGGAAATGGACGCTAATCAGATTGTGGAGCGCCAGCT 1051
Query 32059 TGCCGGCGCAGGAATGATGTCGGTGAGTGTGCTGCGTAACCCATCACGTATGGACGATGA 32118
||| || ||||||| |||| ||| | ||||| || ||| ||| |||||||| ||
Sbjct 1050 TGCAGGAGCAGGAAACTTGTCAGTGTCGGCACTGCGAAATCCAGCACAAATGGACGACGA 991
Query 32119 AGGATGGGCGAGAGTTGCAAGTGGGATG--AAG-TTGCTGGCAGATCTAGATGTGTGGGT 32175
||| ||||| | ||| | ||| ||| ||| ||||| | |||| || || ||| |
Sbjct 990 AGGCTGGGCAAAAGTCACCGCTGGAATGGGAAGATTGCTTG---ATCTCGACGTATGGAT 934
Query 32176 AGTTGACGCGT-CACGTTTGTCTGTCGAAGAAATCAGGTCCATCGCCGAACGCCACAAGC 32234
|| ||||| || | | | || || | ||| | ||||||||||||| |||||||
Sbjct 933 TGTGGACGCCAGCAAGATGAAC-GTGGAGCAGATCCGCGCCATCGCCGAACGTCACAAGC 875
Query 32235 AGGAGCACCCGAATCTGTCACTGATTATGGCTGACTATCTCGGGCTAATTGAGAAACCAA 32294
| ||||| || || || || | | |||||| ||||| || ||||| || ||||
Sbjct 874 GCAACAACCCGGCACTATCGCTCATCCTTGTTGACTACCTCGGCCTGATTGACAAGCCAA 815
Query 32295 AAGCGGAACGTAATGACCTCGCAATTGCTCACATCTCCGGTAGCCTGAAAGCG-ATGGCG 32353
| || || || || ||||| || || || ||||||||||| |||||||| ||| |||||
Sbjct 814 AGGCAGACCGCAACGACCTGGCGATCGCGCACATCTCCGGCAGCCTGAA-GCGCATGGCA 756
Query 32354 AAAGACCTGAAAACTCCTGTTATCTCCCTAAGCCAGCTCTCCCGCGATGTTGAGAAGCGA 32413
||||| || ||||| |||||||| || || || ||||| |||||||||||||| |||||
Sbjct 755 AAAGATCTCAAAACGCCTGTTATGTCGCTTAGTCAGCTATCCCGCGATGTTGAAAAGCGC 696
Query 32414 CCAA----ACA--AACGCCCGACAAACGCAGATTTGCGTGATTCAGGAAGCATTGAACAG 32467
|| | ||| || ||||| ||||| ||| |||| || || ||||||||||| |||
Sbjct 695 CCGAAAGGACAGCGCCGACCGACCAACGCCGATCTGCGCGACTCGGGAAGCATTGAGCAG 636
Query 32468 GATGCAGACTCAATCATCATGCTCTATCGGGAAGCGGTATATGACG-AGAA-CAGTAGCG 32525
|| || ||| |||||||||||||| || ||||| || ||||||| |||| | |||
Sbjct 635 GACGCCGACAGCATCATCATGCTCTACCGCGAAGCTGTGTATGACGAAGAATCCCCAGCT 576
Query 32526 CCGCACCATTTGCTGAAATCATCGTGACGAAAAACCGTTTTGGCTCGCTTGGTACGGTTT 32585
|| | || || ||||||||||| || |||||||| || || ||| || || || |
Sbjct 575 GCGAA--GTTGGCAGAAATCATCGTCACCAAAAACCGCTTCGGGCAGCTCGGCACTGTCT 518
Query 32586 ACCAGCGGTTCTGCAACGGACACTTT 32611
||||| ||| ||||| || |||
Sbjct 517 ACCAGGCTTTCAATAACGGGCATTTT 492
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127147865833250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |