Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_018454.1
Length=39974
Score E
Sequences producing significant alignments: (Bits) Value
seq3495 116 9e-22
>seq3495
Length=4271
Score = 116 bits (128), Expect = 9e-22
Identities = 148/198 (75%), Gaps = 8/198 (4%)
Strand=Plus/Minus
Query 35007 TGGGGCTTCCCGGCTGACACCAGCGACACGCTCAAAACCGAGATTCAGTACGCGGTTAAC 35066
||||| |||||||| ||||| |||||||| || || || ||||||||| | | |
Sbjct 773 TGGGGTTTCCCGGCGAACACCGAGGACACGCTGAAGACGGAAATTCAGTACAGCCTGACC 714
Query 35067 GGTGACACCGAAAACCC-GCTTT--TGCTGGCTGATGTGCCCTATCCGCAGCGCGATTAT 35123
||| ||||| || || | ||||| ||||||| || || ||||||||| | |||
Sbjct 713 GGT---ACCGAGGACGATGCCATACTGCTGACTGATGTACCTTACCCGCAGCGCAAATAT 657
Query 35124 TCACAGCTCGGCCTGAAAGCCGGTGAGCGGTTTATG-TACCGCGCGCAACTGGTGGACAG 35182
||| | ||||| ||||| || || | ||| || ||||||||||| ||||||||| |
Sbjct 656 CAGCAGATGGGCCTTAAAGCTGGGCAG-GTTTTCTGGTACCGCGCGCAGCTGGTGGACCG 598
Query 35183 AACCGGCAACGAATCCGG 35200
||||||||| ||||||||
Sbjct 597 AACCGGCAATGAATCCGG 580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127758892185600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |