Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_018454.1 Length=39974 Score E Sequences producing significant alignments: (Bits) Value seq3495 116 9e-22 >seq3495 Length=4271 Score = 116 bits (128), Expect = 9e-22 Identities = 148/198 (75%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 35007 TGGGGCTTCCCGGCTGACACCAGCGACACGCTCAAAACCGAGATTCAGTACGCGGTTAAC 35066 ||||| |||||||| ||||| |||||||| || || || ||||||||| | | | Sbjct 773 TGGGGTTTCCCGGCGAACACCGAGGACACGCTGAAGACGGAAATTCAGTACAGCCTGACC 714 Query 35067 GGTGACACCGAAAACCC-GCTTT--TGCTGGCTGATGTGCCCTATCCGCAGCGCGATTAT 35123 ||| ||||| || || | ||||| ||||||| || || ||||||||| | ||| Sbjct 713 GGT---ACCGAGGACGATGCCATACTGCTGACTGATGTACCTTACCCGCAGCGCAAATAT 657 Query 35124 TCACAGCTCGGCCTGAAAGCCGGTGAGCGGTTTATG-TACCGCGCGCAACTGGTGGACAG 35182 ||| | ||||| ||||| || || | ||| || ||||||||||| ||||||||| | Sbjct 656 CAGCAGATGGGCCTTAAAGCTGGGCAG-GTTTTCTGGTACCGCGCGCAGCTGGTGGACCG 598 Query 35183 AACCGGCAACGAATCCGG 35200 ||||||||| |||||||| Sbjct 597 AACCGGCAATGAATCCGG 580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127758892185600