Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_019522.1 Length=48454 Score E Sequences producing significant alignments: (Bits) Value seq2440 147 7e-31 >seq2440 Length=3976 Score = 147 bits (162), Expect = 7e-31 Identities = 257/374 (69%), Gaps = 0/374 (0%) Strand=Plus/Plus Query 11977 CAGATTTTAGATATGTGCTGTGGCAGCCGTATGTTCTGGCGTGACAAACGCGATCCGCGC 12036 || || |||||||||||||| || || |||||||||| ||||| ||||||||| Sbjct 909 CAAATATTAGATATGTGCTGCGGTTCACGCATGTTCTGGCTCAACAAAACCGATCCGCGA 968 Query 12037 GCGGTGTTTATGGATAACCGCAGCGAACAGCACACACTGTGCGACGGCCGCAGCCTGGTT 12096 || || ||| |||| ||||| || ||||| || || || ||| || | Sbjct 969 GCTGTATTTGCTGATATCCGCAAAGAGTCCCACACGCTATGTGATAACCGGGCATTGCAT 1028 Query 12097 ATCTCTCCTGACATCATCGCTGACTTTCGCCAGCTCCCTTTTGCTGATGAGTCGTTTCCT 12156 |||| || || | || ||||| || ||| | || || || ||| ||| | Sbjct 1029 ATCTGCCCGGATGTTATTGCTGATTTCCGCGCTTTGCCGTTCGCCAGTGAACATTTTGCC 1088 Query 12157 GTTGTCGTATTCGACCCTCCACATCTTGAAAGAGCAGGGCCAGAGGGCTGGATGCGCAAA 12216 || |||||||| || || || || || | || || | | |||||||||||||| Sbjct 1089 CAGGTGGTATTCGATCCGCCGCACCTCGACCGCGCCGGTGAAAATGGCTGGATGCGCAAG 1148 Query 12217 AAATACGGCGTGTTGAATCCAAAGACATGGCGAGATGATTTGCGTGCTGGATTTGTCGAA 12276 ||||| |||| | || | |||||| ||||| |||||| | || ||||| || | || Sbjct 1149 AAATATGGCGCGCTGGACAAAAAGACGTGGCGCGATGATATCCGCGCTGGGTTCGCTGAG 1208 Query 12277 GCGTTCCGCGTGCTGCGACCTGATGGCGTGTTGATTTTCAAATGGAACGAAACACAGATT 12336 || ||| | |||||||| || | ||| | ||||||| |||||||||||||| ||||| Sbjct 1209 GCATTCAGGGTGCTGCGGCCACACGGCACGCTGATTTTTAAATGGAACGAAACGCAGATC 1268 Query 12337 CCTGTCAGCCAGGT 12350 || || || |||| Sbjct 1269 CCGGTGAGGGAGGT 1282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154887182593600