Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_019522.1
Length=48454
Score E
Sequences producing significant alignments: (Bits) Value
seq2440 147 7e-31
>seq2440
Length=3976
Score = 147 bits (162), Expect = 7e-31
Identities = 257/374 (69%), Gaps = 0/374 (0%)
Strand=Plus/Plus
Query 11977 CAGATTTTAGATATGTGCTGTGGCAGCCGTATGTTCTGGCGTGACAAACGCGATCCGCGC 12036
|| || |||||||||||||| || || |||||||||| ||||| |||||||||
Sbjct 909 CAAATATTAGATATGTGCTGCGGTTCACGCATGTTCTGGCTCAACAAAACCGATCCGCGA 968
Query 12037 GCGGTGTTTATGGATAACCGCAGCGAACAGCACACACTGTGCGACGGCCGCAGCCTGGTT 12096
|| || ||| |||| ||||| || ||||| || || || ||| || |
Sbjct 969 GCTGTATTTGCTGATATCCGCAAAGAGTCCCACACGCTATGTGATAACCGGGCATTGCAT 1028
Query 12097 ATCTCTCCTGACATCATCGCTGACTTTCGCCAGCTCCCTTTTGCTGATGAGTCGTTTCCT 12156
|||| || || | || ||||| || ||| | || || || ||| ||| |
Sbjct 1029 ATCTGCCCGGATGTTATTGCTGATTTCCGCGCTTTGCCGTTCGCCAGTGAACATTTTGCC 1088
Query 12157 GTTGTCGTATTCGACCCTCCACATCTTGAAAGAGCAGGGCCAGAGGGCTGGATGCGCAAA 12216
|| |||||||| || || || || || | || || | | ||||||||||||||
Sbjct 1089 CAGGTGGTATTCGATCCGCCGCACCTCGACCGCGCCGGTGAAAATGGCTGGATGCGCAAG 1148
Query 12217 AAATACGGCGTGTTGAATCCAAAGACATGGCGAGATGATTTGCGTGCTGGATTTGTCGAA 12276
||||| |||| | || | |||||| ||||| |||||| | || ||||| || | ||
Sbjct 1149 AAATATGGCGCGCTGGACAAAAAGACGTGGCGCGATGATATCCGCGCTGGGTTCGCTGAG 1208
Query 12277 GCGTTCCGCGTGCTGCGACCTGATGGCGTGTTGATTTTCAAATGGAACGAAACACAGATT 12336
|| ||| | |||||||| || | ||| | ||||||| |||||||||||||| |||||
Sbjct 1209 GCATTCAGGGTGCTGCGGCCACACGGCACGCTGATTTTTAAATGGAACGAAACGCAGATC 1268
Query 12337 CCTGTCAGCCAGGT 12350
|| || || ||||
Sbjct 1269 CCGGTGAGGGAGGT 1282
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 154887182593600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |