Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_019529.1 Length=111506 Score E Sequences producing significant alignments: (Bits) Value seq2024 98.7 7e-16 seq2189 91.5 1e-13 >seq2024 Length=8047 Score = 98.7 bits (108), Expect = 7e-16 Identities = 69/79 (87%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 45235 TGCGCCCTTAGCTCAGCTGGATAGAGCACGTCCCTTCTAAGGATGTGGTCGTAGGTTCGA 45294 |||||||||||||||| ||||||||||| ||||||||| |||||||||||||| Sbjct 7824 TGCGCCCTTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCGTAGGTTCGA 7765 Query 45295 ATCCTACAGGGCGTGCCAT 45313 ||||||||||||||||||| Sbjct 7764 ATCCTACAGGGCGTGCCAT 7746 >seq2189 Length=7749 Score = 91.5 bits (100), Expect = 1e-13 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 45234 ATGCGCCCTTAGCTCAGCTGGATAGAGCACGTCCCTTCTAAGGATGTGGTCGTAGGTTCG 45293 |||||||||||||||||||||||||||||| ||||||||| |||| ||||||| Sbjct 7521 ATGCGCCCTTAGCTCAGCTGGATAGAGCACCGGCCTTCTAAGCCGTAGGTCACAGGTTCG 7462 Query 45294 AATCCTACAGGGCGTGCCAT 45313 |||||| |||||||||||| Sbjct 7461 AATCCTGTAGGGCGTGCCAT 7442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356590392928975