Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_019529.1
Length=111506
Score E
Sequences producing significant alignments: (Bits) Value
seq2024 98.7 7e-16
seq2189 91.5 1e-13
>seq2024
Length=8047
Score = 98.7 bits (108), Expect = 7e-16
Identities = 69/79 (87%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 45235 TGCGCCCTTAGCTCAGCTGGATAGAGCACGTCCCTTCTAAGGATGTGGTCGTAGGTTCGA 45294
|||||||||||||||| ||||||||||| ||||||||| ||||||||||||||
Sbjct 7824 TGCGCCCTTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCGTAGGTTCGA 7765
Query 45295 ATCCTACAGGGCGTGCCAT 45313
|||||||||||||||||||
Sbjct 7764 ATCCTACAGGGCGTGCCAT 7746
>seq2189
Length=7749
Score = 91.5 bits (100), Expect = 1e-13
Identities = 68/80 (85%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 45234 ATGCGCCCTTAGCTCAGCTGGATAGAGCACGTCCCTTCTAAGGATGTGGTCGTAGGTTCG 45293
|||||||||||||||||||||||||||||| ||||||||| |||| |||||||
Sbjct 7521 ATGCGCCCTTAGCTCAGCTGGATAGAGCACCGGCCTTCTAAGCCGTAGGTCACAGGTTCG 7462
Query 45294 AATCCTACAGGGCGTGCCAT 45313
|||||| ||||||||||||
Sbjct 7461 AATCCTGTAGGGCGTGCCAT 7442
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356590392928975
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |