Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_019540.1
Length=49390
Score E
Sequences producing significant alignments: (Bits) Value
seq2189 91.5 5e-14
seq2024 80.6 8e-11
>seq2189
Length=7749
Score = 91.5 bits (100), Expect = 5e-14
Identities = 68/80 (85%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 44191 TAAGCCCCGTTAGTTCAATTGGATAGAGCAACGGCCTTCTAAGCCGTGAGTTACAGGTTC 44250
|| || || |||| ||| ||||||||||| |||||||||||||||| || ||||||||
Sbjct 7522 TATGCGCCCTTAGCTCAGCTGGATAGAGCACCGGCCTTCTAAGCCGTAGGTCACAGGTTC 7463
Query 44251 GAATCCTGTACGGGGTGCCA 44270
|||||||||| || ||||||
Sbjct 7462 GAATCCTGTAGGGCGTGCCA 7443
>seq2024
Length=8047
Score = 80.6 bits (88), Expect = 8e-11
Identities = 64/77 (83%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 44194 GCCCCGTTAGTTCAATTGGATAGAGCAACGGCCTTCTAAGCCGTGAGTTACAGGTTCGAA 44253
|| || |||| ||| ||||||||||||||||||||||||||||| || |||||||||
Sbjct 7823 GCGCCCTTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCGTAGGTTCGAA 7764
Query 44254 TCCTGTACGGGGTGCCA 44270
|||| | || ||||||
Sbjct 7763 TCCTACAGGGCGTGCCA 7747
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 157881531629200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |