Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_019540.1 Length=49390 Score E Sequences producing significant alignments: (Bits) Value seq2189 91.5 5e-14 seq2024 80.6 8e-11 >seq2189 Length=7749 Score = 91.5 bits (100), Expect = 5e-14 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 44191 TAAGCCCCGTTAGTTCAATTGGATAGAGCAACGGCCTTCTAAGCCGTGAGTTACAGGTTC 44250 || || || |||| ||| ||||||||||| |||||||||||||||| || |||||||| Sbjct 7522 TATGCGCCCTTAGCTCAGCTGGATAGAGCACCGGCCTTCTAAGCCGTAGGTCACAGGTTC 7463 Query 44251 GAATCCTGTACGGGGTGCCA 44270 |||||||||| || |||||| Sbjct 7462 GAATCCTGTAGGGCGTGCCA 7443 >seq2024 Length=8047 Score = 80.6 bits (88), Expect = 8e-11 Identities = 64/77 (83%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 44194 GCCCCGTTAGTTCAATTGGATAGAGCAACGGCCTTCTAAGCCGTGAGTTACAGGTTCGAA 44253 || || |||| ||| ||||||||||||||||||||||||||||| || ||||||||| Sbjct 7823 GCGCCCTTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCGTAGGTTCGAA 7764 Query 44254 TCCTGTACGGGGTGCCA 44270 |||| | || |||||| Sbjct 7763 TCCTACAGGGCGTGCCA 7747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157881531629200