Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_019720.1 Length=44120 Score E Sequences producing significant alignments: (Bits) Value seq2959 277 5e-70 >seq2959 Length=4395 Score = 277 bits (306), Expect = 5e-70 Identities = 455/646 (70%), Gaps = 14/646 (2%) Strand=Plus/Minus Query 36153 GCGCGGGGTATTGATTTTCTCAATGGAAATGAGCGCATTGCAGATTGCAGAGCGAAGTAT 36212 |||||| || |||||||| ||||||||| ||| ||||||| ||||| | Sbjct 1110 GCGCGGCGTGCTGATTTTCAGCATGGAAATGGACGCTAATCAGATTGTGGAGCGCCAGCT 1051 Query 36213 TGCCAACGCCGGGAGGATGTCGGTTAGCGTGCTGCGAAATCCTGCATCGATGGATGACGA 36272 ||| || || | |||| || | ||||||||||| ||| ||||| ||||| Sbjct 1050 TGCAGGAGCAGGAAACTTGTCAGTGTCGGCACTGCGAAATCCAGCACAAATGGACGACGA 991 Query 36273 AGGCTGGGCGCGCGTTGCTAACGGCATGAGTCAGCTTGCA-GATTTGGATGTATGGGTAG 36331 ||||||||| || | || ||| | || |||| ||| | || |||||| | | Sbjct 990 AGGCTGGGCAAAAGTCACCGCTGGAATGGGA-AGATTGCTTGATCTCGACGTATGGATTG 932 Query 36332 TCGATGCCT-CGCGGTTATCGGTCGAAGAAATACGCTCAATCGCAGAACGGCACAAACAG 36390 | || ||| | | | | || | || | || ||| | ||||| ||||| ||||| | Sbjct 931 TGGACGCCAGCAAGATGAACG-TGGAGCAGATCCGCGCCATCGCCGAACGTCACAAGCGC 873 Query 36391 GAAAATCCAAACCTGTCACTCATCATGGCGGATTATCTTGGCCTGATTGAGAAGCCGAAA 36450 | || || || || |||||| | | || || || ||||||||||| ||||| || Sbjct 872 AACAACCCGGCACTATCGCTCATCCTTGTTGACTACCTCGGCCTGATTGACAAGCCAAAG 813 Query 36451 GCAGATCGCAACGACCTCGCAATTGCTCACATCTCAGGAAGCCTGAAGGCGATGGCGAAA 36510 ||||| ||||||||||| || || || |||||||| || ||||||||| ||||| ||| Sbjct 812 GCAGACCGCAACGACCTGGCGATCGCGCACATCTCCGGCAGCCTGAAGCGCATGGCAAAA 753 Query 36511 GACCTGAAAACACCGGTTATCTCCCTGAGTCAGCTTTCACGCGATGTTGAGAAGCGACCA 36570 || || ||||| || ||||| || || |||||||| || ||||||||||| ||||| || Sbjct 752 GATCTCAAAACGCCTGTTATGTCGCTTAGTCAGCTATCCCGCGATGTTGAAAAGCGCCCG 693 Query 36571 A----ACA--AACGCCCGACAAACGCAGATTTGCGTGATTCAGGAAGCATTGAACAGGAC 36624 | ||| || ||||| ||||| ||| |||| || || ||||||||||| |||||| Sbjct 692 AAAGGACAGCGCCGACCGACCAACGCCGATCTGCGCGACTCGGGAAGCATTGAGCAGGAC 633 Query 36625 GCAGACTCAATCATCATGCTCTATCGGGAAGCGGTATATGACG-AGAA-CAGTAGCGCCG 36682 || ||| |||||||||||||| || ||||| || ||||||| |||| | ||| || Sbjct 632 GCCGACAGCATCATCATGCTCTACCGCGAAGCTGTGTATGACGAAGAATCCCCAGCTGCG 573 Query 36683 CACCATTTGCTGAAATCATTGTGACAAAAAACCGTTTTGGCTCGCTTGGTACGGTTTACC 36742 | || || |||||||| || || |||||||| || || ||| || || || |||| Sbjct 572 AA--GTTGGCAGAAATCATCGTCACCAAAAACCGCTTCGGGCAGCTCGGCACTGTCTACC 515 Query 36743 AGCGGTTCTGCAACGGACACTTTGTTGCATGTGACCAGGATGAAGC 36788 || ||| ||||| || ||| || |||||||| ||||| Sbjct 514 AGGCTTTCAATAACGGGCATTTTCAGCCAACGGACCAGGAAGAAGC 469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141022322849700