Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_019720.1
Length=44120
Score E
Sequences producing significant alignments: (Bits) Value
seq2959 277 5e-70
>seq2959
Length=4395
Score = 277 bits (306), Expect = 5e-70
Identities = 455/646 (70%), Gaps = 14/646 (2%)
Strand=Plus/Minus
Query 36153 GCGCGGGGTATTGATTTTCTCAATGGAAATGAGCGCATTGCAGATTGCAGAGCGAAGTAT 36212
|||||| || |||||||| ||||||||| ||| ||||||| ||||| |
Sbjct 1110 GCGCGGCGTGCTGATTTTCAGCATGGAAATGGACGCTAATCAGATTGTGGAGCGCCAGCT 1051
Query 36213 TGCCAACGCCGGGAGGATGTCGGTTAGCGTGCTGCGAAATCCTGCATCGATGGATGACGA 36272
||| || || | |||| || | ||||||||||| ||| ||||| |||||
Sbjct 1050 TGCAGGAGCAGGAAACTTGTCAGTGTCGGCACTGCGAAATCCAGCACAAATGGACGACGA 991
Query 36273 AGGCTGGGCGCGCGTTGCTAACGGCATGAGTCAGCTTGCA-GATTTGGATGTATGGGTAG 36331
||||||||| || | || ||| | || |||| ||| | || |||||| | |
Sbjct 990 AGGCTGGGCAAAAGTCACCGCTGGAATGGGA-AGATTGCTTGATCTCGACGTATGGATTG 932
Query 36332 TCGATGCCT-CGCGGTTATCGGTCGAAGAAATACGCTCAATCGCAGAACGGCACAAACAG 36390
| || ||| | | | | || | || | || ||| | ||||| ||||| ||||| |
Sbjct 931 TGGACGCCAGCAAGATGAACG-TGGAGCAGATCCGCGCCATCGCCGAACGTCACAAGCGC 873
Query 36391 GAAAATCCAAACCTGTCACTCATCATGGCGGATTATCTTGGCCTGATTGAGAAGCCGAAA 36450
| || || || || |||||| | | || || || ||||||||||| ||||| ||
Sbjct 872 AACAACCCGGCACTATCGCTCATCCTTGTTGACTACCTCGGCCTGATTGACAAGCCAAAG 813
Query 36451 GCAGATCGCAACGACCTCGCAATTGCTCACATCTCAGGAAGCCTGAAGGCGATGGCGAAA 36510
||||| ||||||||||| || || || |||||||| || ||||||||| ||||| |||
Sbjct 812 GCAGACCGCAACGACCTGGCGATCGCGCACATCTCCGGCAGCCTGAAGCGCATGGCAAAA 753
Query 36511 GACCTGAAAACACCGGTTATCTCCCTGAGTCAGCTTTCACGCGATGTTGAGAAGCGACCA 36570
|| || ||||| || ||||| || || |||||||| || ||||||||||| ||||| ||
Sbjct 752 GATCTCAAAACGCCTGTTATGTCGCTTAGTCAGCTATCCCGCGATGTTGAAAAGCGCCCG 693
Query 36571 A----ACA--AACGCCCGACAAACGCAGATTTGCGTGATTCAGGAAGCATTGAACAGGAC 36624
| ||| || ||||| ||||| ||| |||| || || ||||||||||| ||||||
Sbjct 692 AAAGGACAGCGCCGACCGACCAACGCCGATCTGCGCGACTCGGGAAGCATTGAGCAGGAC 633
Query 36625 GCAGACTCAATCATCATGCTCTATCGGGAAGCGGTATATGACG-AGAA-CAGTAGCGCCG 36682
|| ||| |||||||||||||| || ||||| || ||||||| |||| | ||| ||
Sbjct 632 GCCGACAGCATCATCATGCTCTACCGCGAAGCTGTGTATGACGAAGAATCCCCAGCTGCG 573
Query 36683 CACCATTTGCTGAAATCATTGTGACAAAAAACCGTTTTGGCTCGCTTGGTACGGTTTACC 36742
| || || |||||||| || || |||||||| || || ||| || || || ||||
Sbjct 572 AA--GTTGGCAGAAATCATCGTCACCAAAAACCGCTTCGGGCAGCTCGGCACTGTCTACC 515
Query 36743 AGCGGTTCTGCAACGGACACTTTGTTGCATGTGACCAGGATGAAGC 36788
|| ||| ||||| || ||| || |||||||| |||||
Sbjct 514 AGGCTTTCAATAACGGGCATTTTCAGCCAACGGACCAGGAAGAAGC 469
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 141022322849700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |