Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_019721.1
Length=40029
Score E
Sequences producing significant alignments: (Bits) Value
seq3495 423 5e-114
>seq3495
Length=4271
Score = 423 bits (468), Expect = 5e-114
Identities = 428/555 (77%), Gaps = 4/555 (1%)
Strand=Plus/Minus
Query 16156 GGGAACTGGGTTAACGTGCCGCGCAGCTC--CACAACGTCATTCGACGTCCCCGGAATTT 16213
|| |||||||||| ||||||||| | || ||| || ||||| || | | || |
Sbjct 995 GGAAACTGGGTTAGCGTGCCGCGTACGTCATCACTCGGT--TTCGAAGTGCAGGAGATCT 938
Query 16214 ATGCCGGGCGCTACCTGGTGCGCGTGCGCGCAATCAATGCCGCAGAAATTTCATCCGGAT 16273
| | || ||||||||||| || ||| | ||| | || || || ||||||||| ||
Sbjct 937 ACTCTGGTCGCTACCTGGTTCGGGTGAGAGCAGTAAACTCCAGTGATGTTTCATCCGTAT 878
Query 16274 GGGGCTATTCAGAAGAGAAAACGCTGACGGGTAAAGTGGGCAATCCACCGAAGCCGGTTG 16333
||| | || | || ||| || ||||||||||| || |||||||| || |||||||
Sbjct 877 GGGCGTCATCTGCTGAAGTAACTCTTACGGGTAAAGTTGGTAATCCACCTAAACCGGTTG 818
Query 16334 GCTTCATCGCTTCTGAAAACGTGGTTTTCGGTATCGAGCTGAATTGGGGATTCTCGGCGA 16393
| || | |||||||||||||| || || |||||||||||||| ||||| ||| ||||||
Sbjct 817 GGTTTACTGCTTCTGAAAACGTTGTGTTTGGTATCGAGCTGAACTGGGGTTTCCCGGCGA 758
Query 16394 ATACCGACGACACGCTGAAGACGGAGATTCAGTACAGCCTGACCGGGACAGGGGACGATG 16453
| ||||| ||||||||||||||||| |||||||||||||||||||| || | ||||||||
Sbjct 757 ACACCGAGGACACGCTGAAGACGGAAATTCAGTACAGCCTGACCGGTACCGAGGACGATG 698
Query 16454 CGATGCTGCTGGCCGATGTGCCATATCCACAACGAAAATATCAGCAGATGGGACTGAAGG 16513
| || |||||| | ||||| || || || || || ||||||||||||||||| || || |
Sbjct 697 CCATACTGCTGACTGATGTACCTTACCCGCAGCGCAAATATCAGCAGATGGGCCTTAAAG 638
Query 16514 CGGGACAGATTTTCTGGTACCGCGCGCAGCTGGTCGACAGAACAGGCAACGAGTCCGGGT 16573
| || ||| ||||||||||||||||||||||||| ||| |||| ||||| || |||||||
Sbjct 637 CTGGGCAGGTTTTCTGGTACCGCGCGCAGCTGGTGGACCGAACCGGCAATGAATCCGGGT 578
Query 16574 ATACGGATTGGGTGCGAGGACAGGCCAGCATCGACGTTTCAGACATCACCGATGTGATCC 16633
| || || | || || || ||||||||| | || || || || ||||| |||| || |
Sbjct 577 ACACCGAATTTGTACGTGGCCAGGCCAGCGTTGATGTATCGGATATCACAGATGCAATTC 518
Query 16634 TGGAGGAAATTAAAGACTCCGACACATTCAAAGATCTGATTGAGAACGCGGTGGACAGCA 16693
||||||| |||||| ||| || ||||| || ||||| ||| | || |||| |||||
Sbjct 517 TGGAGGACATTAAAACCTCAGAAGTCTTCAAGGACCTGATCGAGGATGCCGTGGCCAGCA 458
Query 16694 ATGAAAAAATTGCTG 16708
||| ||| | ||||
Sbjct 457 GTGACAAACTGGCTG 443
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127934842182350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |