Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_019721.1 Length=40029 Score E Sequences producing significant alignments: (Bits) Value seq3495 423 5e-114 >seq3495 Length=4271 Score = 423 bits (468), Expect = 5e-114 Identities = 428/555 (77%), Gaps = 4/555 (1%) Strand=Plus/Minus Query 16156 GGGAACTGGGTTAACGTGCCGCGCAGCTC--CACAACGTCATTCGACGTCCCCGGAATTT 16213 || |||||||||| ||||||||| | || ||| || ||||| || | | || | Sbjct 995 GGAAACTGGGTTAGCGTGCCGCGTACGTCATCACTCGGT--TTCGAAGTGCAGGAGATCT 938 Query 16214 ATGCCGGGCGCTACCTGGTGCGCGTGCGCGCAATCAATGCCGCAGAAATTTCATCCGGAT 16273 | | || ||||||||||| || ||| | ||| | || || || ||||||||| || Sbjct 937 ACTCTGGTCGCTACCTGGTTCGGGTGAGAGCAGTAAACTCCAGTGATGTTTCATCCGTAT 878 Query 16274 GGGGCTATTCAGAAGAGAAAACGCTGACGGGTAAAGTGGGCAATCCACCGAAGCCGGTTG 16333 ||| | || | || ||| || ||||||||||| || |||||||| || ||||||| Sbjct 877 GGGCGTCATCTGCTGAAGTAACTCTTACGGGTAAAGTTGGTAATCCACCTAAACCGGTTG 818 Query 16334 GCTTCATCGCTTCTGAAAACGTGGTTTTCGGTATCGAGCTGAATTGGGGATTCTCGGCGA 16393 | || | |||||||||||||| || || |||||||||||||| ||||| ||| |||||| Sbjct 817 GGTTTACTGCTTCTGAAAACGTTGTGTTTGGTATCGAGCTGAACTGGGGTTTCCCGGCGA 758 Query 16394 ATACCGACGACACGCTGAAGACGGAGATTCAGTACAGCCTGACCGGGACAGGGGACGATG 16453 | ||||| ||||||||||||||||| |||||||||||||||||||| || | |||||||| Sbjct 757 ACACCGAGGACACGCTGAAGACGGAAATTCAGTACAGCCTGACCGGTACCGAGGACGATG 698 Query 16454 CGATGCTGCTGGCCGATGTGCCATATCCACAACGAAAATATCAGCAGATGGGACTGAAGG 16513 | || |||||| | ||||| || || || || || ||||||||||||||||| || || | Sbjct 697 CCATACTGCTGACTGATGTACCTTACCCGCAGCGCAAATATCAGCAGATGGGCCTTAAAG 638 Query 16514 CGGGACAGATTTTCTGGTACCGCGCGCAGCTGGTCGACAGAACAGGCAACGAGTCCGGGT 16573 | || ||| ||||||||||||||||||||||||| ||| |||| ||||| || ||||||| Sbjct 637 CTGGGCAGGTTTTCTGGTACCGCGCGCAGCTGGTGGACCGAACCGGCAATGAATCCGGGT 578 Query 16574 ATACGGATTGGGTGCGAGGACAGGCCAGCATCGACGTTTCAGACATCACCGATGTGATCC 16633 | || || | || || || ||||||||| | || || || || ||||| |||| || | Sbjct 577 ACACCGAATTTGTACGTGGCCAGGCCAGCGTTGATGTATCGGATATCACAGATGCAATTC 518 Query 16634 TGGAGGAAATTAAAGACTCCGACACATTCAAAGATCTGATTGAGAACGCGGTGGACAGCA 16693 ||||||| |||||| ||| || ||||| || ||||| ||| | || |||| ||||| Sbjct 517 TGGAGGACATTAAAACCTCAGAAGTCTTCAAGGACCTGATCGAGGATGCCGTGGCCAGCA 458 Query 16694 ATGAAAAAATTGCTG 16708 ||| ||| | |||| Sbjct 457 GTGACAAACTGGCTG 443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127934842182350