Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_019769.1
Length=38964
Score E
Sequences producing significant alignments: (Bits) Value
seq3495 484 2e-132
>seq3495
Length=4271
Score = 484 bits (536), Expect = 2e-132
Identities = 484/624 (78%), Gaps = 4/624 (1%)
Strand=Plus/Minus
Query 15964 GCCTATGAAGCGCAATGGCGCCGCAACGACGGGAACTGGGTTAACGTGCCGCGCACCTCC 16023
|| || || || ||||||| || || || |||||||||| ||||||||| || ||
Sbjct 1025 GCGTACGAGGCCGAATGGCGACGAGACAGTGGAAACTGGGTTAGCGTGCCGCGTACGTC- 967
Query 16024 ACCACGTCA--TTCGACGTCCCGGGGATTTATGCCGGGCGCTACCTGGTGCGGGTGCGCG 16081
| ||| || ||||| || | || ||| || | || ||||||||||| |||||| | |
Sbjct 966 ATCAC-TCGGTTTCGAAGTGCAGGAGATCTACTCTGGTCGCTACCTGGTTCGGGTGAGAG 908
Query 16082 CAATCAATGCCGCAGAAATTTCATCCGGATGGGGCTATTCAGAAGAGAAAACGCTGACGG 16141
|| | || || || ||||||||| ||||| | || | || ||| || ||||
Sbjct 907 CAGTAAACTCCAGTGATGTTTCATCCGTATGGGCGTCATCTGCTGAAGTAACTCTTACGG 848
Query 16142 GTAAAGTGGGCAATCCACCGAAGCCGGTTGGCTTTATCGCCTCTGAAAACGTGGTGTTCG 16201
||||||| || |||||||| || |||||||| |||| || ||||||||||| ||||| |
Sbjct 847 GTAAAGTTGGTAATCCACCTAAACCGGTTGGGTTTACTGCTTCTGAAAACGTTGTGTTTG 788
Query 16202 GTATCGAGCTGAACTGGGGATTCCCGGCGAATACCGACGACACGCTGAAGACGGAAATTC 16261
||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||
Sbjct 787 GTATCGAGCTGAACTGGGGTTTCCCGGCGAACACCGAGGACACGCTGAAGACGGAAATTC 728
Query 16262 AGTACAGCCTGACCGGGAGCGAAGATGATGCCATTCTTCTGAGCGATGTTCCCTATCCGC 16321
|||||||||||||||| | ||| || |||||||| || |||| ||||| || || ||||
Sbjct 727 AGTACAGCCTGACCGGTACCGAGGACGATGCCATACTGCTGACTGATGTACCTTACCCGC 668
Query 16322 AGCGCAAGTATCAGCAGATGGGCCTGAAGGCGGGGCAAATTTTCTGGTACCGGGCGCAGC 16381
||||||| ||||||||||||||||| || || ||||| ||||||||||||| |||||||
Sbjct 667 AGCGCAAATATCAGCAGATGGGCCTTAAAGCTGGGCAGGTTTTCTGGTACCGCGCGCAGC 608
Query 16382 TGGTGGACAGGACAGGCAATGAGTCGGGTTATACCGACTGGGTACGTGGACAGGCCAGTA 16441
|||||||| | || |||||||| || || || ||||| | |||||||| ||||||||
Sbjct 607 TGGTGGACCGAACCGGCAATGAATCCGGGTACACCGAATTTGTACGTGGCCAGGCCAGCG 548
Query 16442 TCGATGTGTCGGATATCACCGATGTTATCCTGGAGGACATTAAAGAATCGGACACGTTCA 16501
| ||||| ||||||||||| |||| || ||||||||||||||| || || ||||
Sbjct 547 TTGATGTATCGGATATCACAGATGCAATTCTGGAGGACATTAAAACCTCAGAAGTCTTCA 488
Query 16502 AGGAACTGATCGAAAGCGCAGTAGACAGCAACGAAAAAATTGCTGGTATGGCTGACGATA 16561
|||| |||||||| || || | ||||| || ||| | |||| || |||| | |
Sbjct 487 AGGACCTGATCGAGGATGCCGTGGCCAGCAGTGACAAACTGGCTGAACTGTCTGATGCGA 428
Query 16562 TCAGACAGAACGCTGACGATCTGG 16585
| | |||| ||||| | |||||
Sbjct 427 TTAAGGAGAATGCTGATGGTCTGG 404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124527810427100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |