Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_019914.1
Length=40071
Score E
Sequences producing significant alignments: (Bits) Value
seq2740 123 6e-24
>seq2740
Length=4841
Score = 123 bits (136), Expect = 6e-24
Identities = 198/279 (71%), Gaps = 8/279 (3%)
Strand=Plus/Minus
Query 33634 TGTTTGGTTATGGAAGAAAGATACTTATTTTCGTCATAATTGTTGTATCTAACGTAATAG 33693
||||||||| || ||||| || | || || || || ||| || || |||| | ||||
Sbjct 1459 TGTTTGGTT-TGCGAGAAAAATGATGATATTTGT-ATTATTATTTTAGCTAATATTATAG 1402
Query 33694 ATCAGATACTAGCTTTAAATGGTGGACTAATTATGATTACAATCTTATTTTATATCGCAA 33753
|||| ||||| | ||||||||||||| | ||||||||| | | | ||| | ||||
Sbjct 1401 ATCAAATACTTGAGCTAAATGGTGGACTGTTAATGATTACATTACTTTATTACTTAGCAA 1342
Query 33754 ATGAGGCTTTATCTGTAGTTGAGAATTGTGCTGCTATGGGCGTACTAGTACCTAAACAAT 33813
|||| | ||| | || || ||||| |||| ||||| ||| |||| ||||| ||
Sbjct 1341 ATGAAGGATTAAGCATTGTAGAAAATTGCGCTGAAATGGGTGTATTAGTTCCTAAGGAAA 1282
Query 33814 TAGCTGAAAGATTAGCAGTTATAAAAAATGAAGGAAGTCAACCACCTTCAATTACCACTG 33873
| ||||||| | | |||||| |||| ||| | || | || |||| || | |
Sbjct 1281 TTGCTGAAAAACTTCAAGTTATTAAAAGTGATAAAGGT--TCAACAGTCAA--ACAA--G 1228
Query 33874 AAATAAAAGAAGAAATGACAACAAAATATAATAAAGAAC 33912
|||| ||||||||| | ||||| ||| ||||||| ||||
Sbjct 1227 AAATTAAAGAAGAATTTACAACTAAACATAATAAGGAAC 1189
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 128069203998050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |