Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq15 96.9 4e-15
>seq15
Length=1590180
Score = 96.9 bits (106), Expect = 4e-15
Identities = 110/148 (74%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
||| | || || || | ||||||||||| |||||||| || ||||||||||||||||||
Sbjct 1396383 ACAACTATTGGCCCCATTCCAGGACCTCCGCCTCCATGAGGTATACAGAATGTCTTATGT 1396324
Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302
||||| | |||| |||||||||| ||| |||| ||| | || | ||||||
Sbjct 1396323 AAATTCAAATGAGATACATCTGCTCCAATATCACCGGGTCGACACAATCCAAGTTGTGCA 1396264
Query 138303 TTTAGATTTGCACCATCGAGATATACCT 138330
|| | || || ||||| | ||| ||||
Sbjct 1396263 TTCATGTTAGCTCCATCCAAATAAACCT 1396236
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578825243291000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |