Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq15 96.9 4e-15 >seq15 Length=1590180 Score = 96.9 bits (106), Expect = 4e-15 Identities = 110/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 ||| | || || || | ||||||||||| |||||||| || |||||||||||||||||| Sbjct 1396383 ACAACTATTGGCCCCATTCCAGGACCTCCGCCTCCATGAGGTATACAGAATGTCTTATGT 1396324 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 ||||| | |||| |||||||||| ||| |||| ||| | || | |||||| Sbjct 1396323 AAATTCAAATGAGATACATCTGCTCCAATATCACCGGGTCGACACAATCCAAGTTGTGCA 1396264 Query 138303 TTTAGATTTGCACCATCGAGATATACCT 138330 || | || || ||||| | ||| |||| Sbjct 1396263 TTCATGTTAGCTCCATCCAAATAAACCT 1396236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578825243291000