Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_021774.1 Length=29742 Score E Sequences producing significant alignments: (Bits) Value seq3309 86.0 1e-12 >seq3309 Length=43154 Score = 86.0 bits (94), Expect = 1e-12 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 15498 GTGCCGCTGCGTTTTGCCGGTTCTTACCAGCGCGACGACACCGGCGAAATCGTGGCGGTC 15557 |||| |||||| ||| |||| || ||||||||||||||||||||| | |||||| Sbjct 43096 GTGCAGCTGCGCTTTACCGGCTCCATTCAGCGCGACGACACCGGCGAAGTGCAGGCGGTG 43037 Query 15558 GAGGTGGTCATGCGTGGCCGTCATAAAGAAATCGACGGCGGCGAG 15602 ||| ||||| |||||||||| || || || | ||| ||||||| Sbjct 43036 GAGCTGGTCGTGCGTGGCCGCCACAAGGAGCTGGACTCCGGCGAG 42992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 95025794608400