Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_021857.1
Length=41475
Score E
Sequences producing significant alignments: (Bits) Value
seq1477 242 1e-59
>seq1477
Length=14545
Score = 242 bits (268), Expect = 1e-59
Identities = 281/378 (74%), Gaps = 3/378 (1%)
Strand=Plus/Plus
Query 9299 GAGGAGTCTGCATAATGGCCCGTATCGGGGGAACCTGTTATTTCAAAATTGACGGTCAGC 9358
|||||| | |||||||||||||| | || ||| ||||||||| | ||||| | |
Sbjct 1 GAGGAGAGCGAATAATGGCCCGTATTGCTGGTACCACGTATTTCAAACTCGACGGGCTTC 60
Query 9359 AGCTATCGCTGACCGGCGGCATTGAGGTGCCCATGAACAGGACGGTCAATGATGACATCA 9418
|| | ||||| || ||||| ||||| ||||| ||||||| | ||| || ||||| | |
Sbjct 61 AGTTGTCGCTTACTGGCGGTATTGAAGTGCCGATGAACACCAAGGTAAACGATGATGTGA 120
Query 9419 TCGGCCTGGACGGTTCAGTGGACCGCAAGGAAACTCACCGTGCGCCTTATGTCAAAGGGA 9478
||||||| || ||||| || ||||| || ||||| ||||| ||||| || | ||||| |
Sbjct 121 TCGGCCTTGATGGTTCTGTTGACCGTAAAGAAACGCACCGCGCGCCCTACATTAAAGGCA 180
Query 9479 CATTCAAGGTGCCGAAGAATTTTCCGGTGAGTAAAATCACCTCGTCTGATGAGATGACCA 9538
| || || ||||| ||| || ||| | || ||||||||| ||| || ||||||
Sbjct 181 CCTTTAAAGTGCCTAAGGGCTTCCCGCTCAGCAAAATCACCGAGTCCGACAGCATGACCG 240
Query 9539 TCACTGCCGAGCTGGCGAACGGTCAGGTCTATGTATTGTCGTCCGCCTGGCTGCACGGAG 9598
||||| || |||||||| |||||||| ||||| || | ||||||||| || |
Sbjct 241 GTACTGCTGAACTGGCGAATGGTCAGGTGTATGTCCTGACCGAAGCCTGGCTGTTTGGTG 300
Query 9599 AAGCGAACCATAATGCCGAAGAAGGCACGGTTGATCTTGAGTTCCACGGTGAAGAAGGGG 9658
| || ||||| ||||| ||||| ||||||||||| ||||| ||||||||| |||||
Sbjct 301 AGGCCAACCACAATGCTGAAGAGGGCACGGTTGACCTTGAATTCCACGGTTCTGAAGGAT 360
Query 9659 ATTACCAGTAATGAAAGA 9676
|||||| |||||||
Sbjct 361 TCTACCAG---TGAAAGA 375
Score = 122 bits (134), Expect = 2e-23
Identities = 256/376 (68%), Gaps = 8/376 (2%)
Strand=Plus/Plus
Query 14512 ATTGAACATCTTGAACCCTACGGTTTTACCGCAAGGGCAAACAGCGGTGCGGAAGCGGTG 14571
|| ||||| ||||| ||||| || ||||| || ||| ||||| ||||| || ||
Sbjct 6645 ATCGAACAACTTGAGCCCTATGGCTTTACGTCAGCAGCACTGAGCGGCGCGGAGGCCGTT 6704
Query 14572 GTGTTGTTTCCG--GATGGCGACCGTTCTCATG-CGGTG-GTTGTTACGGTGTCGGACCG 14627
| | | || | ||||| || ||||| || | || || |||| | ||| |||| ||
Sbjct 6705 GCG--GCTTACTTTGATGGTGATCGTTCACACGGCGTTGTGTTGGT--GGTCGCGGATCG 6760
Query 14628 GCGCTACCGCCTGAAAGGGCTGCAGACGGGTGAGGTGGCTGTCTATGACGATCAGGGGCA 14687
|| || || |||||||| | || | |||||||| || | |||||||| || | |
Sbjct 6761 TCGGTATCGGCTGAAAGGCTTAAAGTCCGGTGAGGTTGCCATTTATGACGACCAACAGAA 6820
Query 14688 GTCTGTGACGCTGACCCGGGAGGGGATCGTGGTGGACGGTGCAGGTAAAACGATCACGTT 14747
||| || || ||||| || ||||| || ||||| || | || ||| |||||| |
Sbjct 6821 GTCGGTAACCCTGACACGCACAGGGATTGTTGTGGATGGAGGCGGCAAACAGATCACCCT 6880
Query 14748 TCGCAATGCGCCTAAGGCACGTTTTGAAATGGACCTGGAAGTGACAGGACAGGTGAAAGA 14807
| || || || ||||| || |||||||||||| | |||| ||||| | | | ||
Sbjct 6881 TAAAAACGCTCCAAAGGCGCGCTTTGAAATGGACATAGAAGCCACAGGCAACATCACTGA 6940
Query 14808 CCTGTGCGACTCCGGCGGCACCACCATGTCAGCGATGCGGCTTGCCTATAACGGGCATCG 14867
| || || || |||||| | ||| | |||||| | |||||||||||||
Sbjct 6941 CAACTGTGATTCTGGCGGCGTATCAATGGCCCAGATGCGTGTGACCTATAACGGGCACAA 7000
Query 14868 TCACAGAGAGAACGGT 14883
|| | ||||||||||
Sbjct 7001 GCATAAAGAGAACGGT 7016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132560727551450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |