Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_021857.1 Length=41475 Score E Sequences producing significant alignments: (Bits) Value seq1477 242 1e-59 >seq1477 Length=14545 Score = 242 bits (268), Expect = 1e-59 Identities = 281/378 (74%), Gaps = 3/378 (1%) Strand=Plus/Plus Query 9299 GAGGAGTCTGCATAATGGCCCGTATCGGGGGAACCTGTTATTTCAAAATTGACGGTCAGC 9358 |||||| | |||||||||||||| | || ||| ||||||||| | ||||| | | Sbjct 1 GAGGAGAGCGAATAATGGCCCGTATTGCTGGTACCACGTATTTCAAACTCGACGGGCTTC 60 Query 9359 AGCTATCGCTGACCGGCGGCATTGAGGTGCCCATGAACAGGACGGTCAATGATGACATCA 9418 || | ||||| || ||||| ||||| ||||| ||||||| | ||| || ||||| | | Sbjct 61 AGTTGTCGCTTACTGGCGGTATTGAAGTGCCGATGAACACCAAGGTAAACGATGATGTGA 120 Query 9419 TCGGCCTGGACGGTTCAGTGGACCGCAAGGAAACTCACCGTGCGCCTTATGTCAAAGGGA 9478 ||||||| || ||||| || ||||| || ||||| ||||| ||||| || | ||||| | Sbjct 121 TCGGCCTTGATGGTTCTGTTGACCGTAAAGAAACGCACCGCGCGCCCTACATTAAAGGCA 180 Query 9479 CATTCAAGGTGCCGAAGAATTTTCCGGTGAGTAAAATCACCTCGTCTGATGAGATGACCA 9538 | || || ||||| ||| || ||| | || ||||||||| ||| || |||||| Sbjct 181 CCTTTAAAGTGCCTAAGGGCTTCCCGCTCAGCAAAATCACCGAGTCCGACAGCATGACCG 240 Query 9539 TCACTGCCGAGCTGGCGAACGGTCAGGTCTATGTATTGTCGTCCGCCTGGCTGCACGGAG 9598 ||||| || |||||||| |||||||| ||||| || | ||||||||| || | Sbjct 241 GTACTGCTGAACTGGCGAATGGTCAGGTGTATGTCCTGACCGAAGCCTGGCTGTTTGGTG 300 Query 9599 AAGCGAACCATAATGCCGAAGAAGGCACGGTTGATCTTGAGTTCCACGGTGAAGAAGGGG 9658 | || ||||| ||||| ||||| ||||||||||| ||||| ||||||||| ||||| Sbjct 301 AGGCCAACCACAATGCTGAAGAGGGCACGGTTGACCTTGAATTCCACGGTTCTGAAGGAT 360 Query 9659 ATTACCAGTAATGAAAGA 9676 |||||| ||||||| Sbjct 361 TCTACCAG---TGAAAGA 375 Score = 122 bits (134), Expect = 2e-23 Identities = 256/376 (68%), Gaps = 8/376 (2%) Strand=Plus/Plus Query 14512 ATTGAACATCTTGAACCCTACGGTTTTACCGCAAGGGCAAACAGCGGTGCGGAAGCGGTG 14571 || ||||| ||||| ||||| || ||||| || ||| ||||| ||||| || || Sbjct 6645 ATCGAACAACTTGAGCCCTATGGCTTTACGTCAGCAGCACTGAGCGGCGCGGAGGCCGTT 6704 Query 14572 GTGTTGTTTCCG--GATGGCGACCGTTCTCATG-CGGTG-GTTGTTACGGTGTCGGACCG 14627 | | | || | ||||| || ||||| || | || || |||| | ||| |||| || Sbjct 6705 GCG--GCTTACTTTGATGGTGATCGTTCACACGGCGTTGTGTTGGT--GGTCGCGGATCG 6760 Query 14628 GCGCTACCGCCTGAAAGGGCTGCAGACGGGTGAGGTGGCTGTCTATGACGATCAGGGGCA 14687 || || || |||||||| | || | |||||||| || | |||||||| || | | Sbjct 6761 TCGGTATCGGCTGAAAGGCTTAAAGTCCGGTGAGGTTGCCATTTATGACGACCAACAGAA 6820 Query 14688 GTCTGTGACGCTGACCCGGGAGGGGATCGTGGTGGACGGTGCAGGTAAAACGATCACGTT 14747 ||| || || ||||| || ||||| || ||||| || | || ||| |||||| | Sbjct 6821 GTCGGTAACCCTGACACGCACAGGGATTGTTGTGGATGGAGGCGGCAAACAGATCACCCT 6880 Query 14748 TCGCAATGCGCCTAAGGCACGTTTTGAAATGGACCTGGAAGTGACAGGACAGGTGAAAGA 14807 | || || || ||||| || |||||||||||| | |||| ||||| | | | || Sbjct 6881 TAAAAACGCTCCAAAGGCGCGCTTTGAAATGGACATAGAAGCCACAGGCAACATCACTGA 6940 Query 14808 CCTGTGCGACTCCGGCGGCACCACCATGTCAGCGATGCGGCTTGCCTATAACGGGCATCG 14867 | || || || |||||| | ||| | |||||| | ||||||||||||| Sbjct 6941 CAACTGTGATTCTGGCGGCGTATCAATGGCCCAGATGCGTGTGACCTATAACGGGCACAA 7000 Query 14868 TCACAGAGAGAACGGT 14883 || | |||||||||| Sbjct 7001 GCATAAAGAGAACGGT 7016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132560727551450