Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_023550.1 Length=17869 Score E Sequences producing significant alignments: (Bits) Value seq2620 1169 0.0 seq2572 967 0.0 seq2740 109 6e-20 >seq2620 Length=5891 Score = 1169 bits (1296), Expect = 0.0 Identities = 2353/3455 (68%), Gaps = 158/3455 (5%) Strand=Plus/Minus Query 2881 TTTAATACTGTAAATGACATAATAAACTATTATAAGGAG--CAAAAATATGGTAAAACAA 2938 |||||| | ||||||| || |||||||||||| |||| || ||| ||| |||| Sbjct 5520 TTTAATTCAATAAATGATATTATAAACTATTAT--GGAGGTCATAAACATG----AACAG 5467 Query 2939 AATCGTCTAGACATGGTAAGAGATTATCAAAATGCAGTCAATCATGTAAGGaaaaaa-aT 2997 | |||||| || | | | |||||||| | | | || || || ||| || || Sbjct 5466 A-----CTAGACGAAGTCAAACAATATCAAAACGTATTAAA-CAAGTTTCAAAAGAAGAT 5413 Query 2998 ACCTGATAATTATAACCAAATTGCATTAGTAGATGAATTAATGAACCCTGATATTGATTT 3057 ||| | || || || ||||| | | | | | ||| | |||||| ||||||||||| Sbjct 5412 ACCCAAAAAGTACAATCAAATAGAACTTGCTAACGAACTTATGAACAAAGATATTGATTT 5353 Query 3058 TTATATCTCTATATCAAACCGTTCAGACGGTAAATCATTCAATTATGTATNNNNNNNNNN 3117 || || ||||| || |||||||||||||||||| |||| || || | | Sbjct 5352 TTTAATATCTATTTCCAACCGTTCAGACGGTAAAACATTTAACTACATTTCATTTTTTAT 5293 Query 3118 NNNNNNNGCTATGAAACTGGATATTAAGTTTACATTGATATCACGTCATTATACATTACG 3177 |||| || | | ||| || ||| |||||| ||||||| ||||| |||| Sbjct 5292 GAAACTATCTATCGAATTAGGTATAAAATTTGTATTGATTGCACGTCACTATACCCTACG 5233 Query 3178 TGACGCATATCGTGATTTTATAGAAAAAAT---CATTGACGAAAACCCACTATTTAAATC 3234 | |||| || ||||| | ||| | ||||| ||| || | | ||| ||||| Sbjct 5232 TAACGCCTACCGTGAACTGATAAATAAAATAGCCATGGAGCATGATG-ACT--TTAAAGA 5176 Query 3235 AAAACGTGTCACTTTCAGAAGTGCTAGAGATTATTTAGCTATTATCTATCAAGATAAAGA 3294 |||| | | | ||| | || | || |||| | | || | | | | | |||||| Sbjct 5175 AAAA-GACTTA-TTTATGCAGCG-TACAGATGACTATATTAATGTTGGTTATGGTAAAGA 5119 Query 3295 AAT-AGGTGTG--ATTACAGACTTAAATAGTGCAACTGATTTGAAGTATCATTCTAACTT 3351 || | |||| |||||||||||||| | ||| |||||||| || ||||| |||||||| Sbjct 5118 AAGCATGTGTATTATTACAGACTTAAACAATGCGACTGATTTAAAATATCACTCTAACTT 5059 Query 3352 TTTAAAAGACTTTCCAATCATTATTTATGATGAATTTTTAGCACTTGAAGATGACTATTT 3411 ||||||||| | |||||||||| | ||||||||||| ||||| | ||| ||| || || Sbjct 5058 TTTAAAAGATTATCCAATCATTGTATATGATGAATTCCTAGCATTAGAAAGTGATTACTT 4999 Query 3412 AAGTGATGAGTGGGATAAGTTAAAAACGATTTATGAGTCAATCGACCGTAAACATGGCAA 3471 | ||||| ||||| || | ||||| || |||||||| || |||||||| || || || Sbjct 4998 ACCAGATGAATGGGACAAACTTAAAACCATATATGAGTCTATAGACCGTAACCACGGGAA 4939 Query 3472 TGTTGATTACATTGGATTTCCAAAAATATTTTTATTAGGTAATGCTGTTAACTTTTCAAG 3531 | | || | | | | || |||||| | || ||||||||||| ||||||||||| || Sbjct 4938 TATACCCTATTTGGAAATACCTAAAATAGTATTGTTAGGTAATGCAGTTAACTTTTCTAG 4879 Query 3532 TCCTATTTTATCTAATTTAAACATATATAATTTACTTCAGAAGCATAAAATGAACACGTC 3591 ||| | | | || |||||||||| ||| |||| |||| || ||||| ||| | Sbjct 4878 TCCCCTACTTGCGAACTTAAACATATTCAATAAACTTGAGAAACACAAAATCAACTCTAT 4819 Query 3592 AAGACTTTACAATAACAT-TTACTTAGAAATGCGCCGTAATGATTATGTGAACGAAAAAC 3650 | | || ||| | |||||| |||||| | |||||||| || || ||||||| Sbjct 4818 GCGTCAGTATGGTAATGTATTACTT-GAAATGAGACGTAATGACAATTCAAATGAAAAAC 4760 Query 3651 GTAATACACGTGCGTTTAACTCTAATGAGGATGCAATGACAACTGGGGAATTTGAATTTA 3710 ||||||| | || || || | | | |||||||||||||| || |||||||| |||| Sbjct 4759 GTAATACTAGGGCTTTCGACAGTGACAATGATGCAATGACAACCGGTGAATTTGATTTTA 4700 Query 3711 ATGAATATAATCTAGCAGATGAAAATTTAAGAAACCACATCAATCAAAATGGAGATTTCT 3770 | | || ||| |||| ||||| ||| | || || || | | |||| || ||||||| Sbjct 4699 ACAATTACAATTTAGCCGATGACGGATTACGCAATCATATTAGTAAAAACGGTGATTTCT 4640 Query 3771 TCTATATCAAGACAGATGATAAATATATCAAAGTGATGTATAATGT-AACTACTTTTATG 3829 |||| ||||| || || ||| |||||| |||||||||||||| || ||| ||| | Sbjct 4639 TCTACATCAAAACCGAAGATGCATATATTAAAGTGATGTATAACGTGAACGACTAT---- 4584 Query 3830 ACA---AATATTATCGTGGTTCCTTATACAAAACAATATGAATTTTGTACCAAAATTAGA 3886 ||| ||||| | || |||| ||| || |||||||| ||| ||||| || || | Sbjct 4583 ACAGTTAATATGAAAGTTATTCCATATGCAGAACAATATACATTCTGTACAGAAGTTCGT 4524 Query 3887 GATATAGACAATCATGTTACCTATTTACGTGATGATATGTTTTATAAAGAAA-ATATGGA 3945 ||| | || || | | |||||||||| || | || | ||||||||| | ||| | Sbjct 4523 GATGTTGAGGATAAAGCTACCTATTTAAAAGAAAACATCT---ATAAAGAAACACATGCA 4467 Query 3946 ACGTTATTATTACAACCCTAGCAATTTACATTTTGATAACGCTTATTCCAAAAATTACGT 4005 | | || |||| || || || ||||||||||||||||| ||||| ||| || | Sbjct 4466 AAGAAAT-ATTATAAACCGTCTAACTTACATTTTGATAACGCCTATTCAAAATCATATAT 4408 Query 4006 GGTGGATAACGATA-ACtatttat--atttagacatgaataaaattattaaatttcatat 4062 || |||| ||| || || || ||||| |||| || ||| |||| ||||| | || Sbjct 4407 TGT---TAACAATATACAATACATTGATTTAAACATTAACAAAGTTATAAAATTGTACAT 4351 Query 4063 taaaaat--gaaatgattaaaaatacatcagaatttgaaagaaaagaaaaaCAATTTGAA 4120 || | | |||| |||||| || | || ||||||||| | |||||| | ||| Sbjct 4350 TACACAACAGAAAAAATTAAACC--CAACTGATTTTGAAAGACACGAAAAAATGTACGAA 4293 Query 4121 GATAACTATATAGA--GAA-TACGAAAAA----GT--ATCTAATGAGACAATA------- 4164 |||||||||||||| ||| || |||||| || | | ||||||| ||| Sbjct 4292 GATAACTATATAGAAAGAACTAAGAAAAACCTTGTTAAACAAATGAGATTATAATTGCGT 4233 Query 4165 ------------CG------AATT------------ATAAAGGTGTGTAAGATTATGGGA 4194 || |||| || |||| |||||||| |||||| Sbjct 4232 GACGAAACGCAACGTGATATAATTGTTTTATTAGCAATTAAGGAGTGTAAGAC-ATGGGA 4174 Query 4195 TTACTAGAATGCATGCAATATCATAAACATGAACGTCGAATGATTTTATATTGGGATATA 4254 ||| | || |||||| |||||| |||| ||||| |||||||||||||| Sbjct 4173 TTATTGGAGGCAATGCAAACACATAAAGGCTTACGTAAAATGACGTTATATTGGGATATT 4114 Query 4255 GAAACATTAGCATACAATAAAGTTAATGGAAGaaaaaaaCCAACCAAATATAAAAACGTA 4314 ||||| ||||||||||| || | | ||||||||| ||||||| | ||||||||||| Sbjct 4113 GAAACCTTAGCATACAACAAGATAGAGGGAAGAAAACAACCAACTGACTATAAAAACGTT 4054 Query 4315 ACGTATTCTGTTGCAATTGGTTGGTTTAATGGTTATGAG--ATTGATGTTGAGGTATTCC 4372 ||| ||| || |||||||| |||| | || ||||| |||||||| || | Sbjct 4053 GTTTATAGTGTAGCTGTTGGTTGGGATAATCA--AGGAACAATTGACGTTGAGGTTTTTC 3996 Query 4373 CAAGTTTTGAATCGTTTTATGACGCTTTTTATACTTATGTAAAACGACGTGATACGATTA 4432 | |||| | || || | | | | || | || |||| | |||| || || || | Sbjct 3995 CCTCTTTTAACTCATTCTTTAAAACATTCTTTAAGTATGCAGAACGCAAAGACACAATAA 3936 Query 4433 CAAAGTCAAAAACAGATATTATTATGATTGCACATAACTGTAATAAGTACGATAATCATT 4492 | || || ||| ||| |||||||| ||||||||||||||||| || ||||| | Sbjct 3935 CGAAATCTCGTACATCAATTGAAATGATTGCGCATAACTGTAATAAGTATGACAATCACT 3876 Query 4493 TTTTACTTAAAGATACCATGCGTTACTTTGA---TAATATCACACGTGAAAATATATATT 4549 |||||||| | |||| | | | || | |||| | | | ||||||| | | Sbjct 3875 TTTTACTTCACGATA---TACAACATATTTACCCTAATGTAAAAGTTGAAAATTTGTTCA 3819 Query 4550 TAAAATCTGCAGAAGAAAATGAACATACACTAAAAATGCAAGAAGCTACTATCTTAGCTA 4609 | ||||| |||||| ||||||| | || | || ||| ||||||||| | |||| Sbjct 3818 TGAAATCAGCAGAAACAAATGAAAACACTGTTAATATGAAAGAAGCTAAAACAGACGCTA 3759 Query 4610 AAAATCAAAATGTAATTTTAGAAAAACGTGTTAAATCCTCTATTAATTTAGATTTAACAA 4669 || | | ||| | |||||||||||||||||||||| || ||||||||||| | | Sbjct 3758 AAGAAGATAATATTGTTTTAGAAAAACGTGTTAAATCTTCAATTAATTTAGACCTTATTT 3699 Query 4670 TGTTTTTAAACGGTTTTAAATTTAATATTATCGATAACTTTATGAAAACAAATACATCAA 4729 | || ||| | |||||||||||| || | |||||||| |||||||||| ||||| | Sbjct 3698 TTTTCTTACAAGGTTTTAAATTTGTCGTTGTTGATAACTTCATGAAAACAACAACATCTA 3639 Query 4730 TTGCAACATTAGGTAAGAAATTACTTGATGGCGGTTACTTAACAGAATCACAACTTAAAA 4789 |||| |||||||| || ||| | || || || || | ||| | |||||||||| Sbjct 3638 TTGCCACATTAGGAAAAAAACTCAAAGACGGTGGATATCTTACATCAGACCAACTTAAAA 3579 Query 4790 CTGATTTTAATTATACGATTTTTGATAAAGATAACGATATGACTGATAGTGAAGCGTATG 4849 | || ||| | ||| || ||||||| || | |||||| |||| ||| |||| Sbjct 3578 CAGACTTTCAATATGATATCTTTGATATTGAAGAGGATATGGATGATGTAGAAAGTTATG 3519 Query 4850 ATTATGCTGTGAAATGTTTTGCAAAACTCACATC-TGAACAACTTACATACATTCATAAT 4908 ||| ||| |||||||| |||||| | || ||| ||| | || |||||| | ||| Sbjct 3518 CTTACGCTTATGAATGTTTTAAAAAACT-AGATAATGACCAAATGACTTACATTAACAAT 3460 Query 4909 GATGTCATTATATTAGGCATGTGTCATATTCATTATAGTGATATATTCCCAAATTTTGAC 4968 || || ||||| ||||| |||||||| |||||| ||||||||||||||| ||||| Sbjct 3459 GACGTTATTATTTTAGGTCAATGTCATATACATTATTCTGATATATTCCCAAACTTTGAT 3400 Query 4969 TATAACAAATTAACATTTTCACTTAATATTATGGAATCTTACTTGAATAATGAAATGACT 5028 ||| ||| | || ||| | || || | ||| ||| |||| ||||| | || Sbjct 3399 TATTCAAAAATGACGTTTAGTGTAAACATCTTAGAAAGTTATATGAACAATGATTTTACC 3340 Query 5029 CGTTTTCAGTTACTCAATCAATATCAAGATATTAAAATATCTTATACGC--ATTATCATT 5086 ||||||| |||| ||| || || | | || | ||| | |||| | ||||| ||| Sbjct 3339 GGTTTTCAACTACTTAAT-AAAAT-AGGCGATGGACGTATTTCATACACAGATTATTATT 3282 Query 5087 TTCATGATATGAATTTTTATGACTATATAAAATCATTTTATCGTGGTGGTTTAAATATGT 5146 |||||| | || ||||||||||||| ||| ||||| ||||||||||||||||| Sbjct 3281 TTCATGGTCGTAACCTTTATGACTATATCAAAGGTTTTTACAATGGTGGTTTAAATATGT 3222 Query 5147 ATAATACCAAATATATCAATAAACTTATTGATGAACCTTGTTTTTCTATAGACATCAATT 5206 |||| | ||||| || || ||||| |||| |||||||||||||| || || |||| Sbjct 3221 ATAACCCTAAATACATTGGACAAATTATTAATGAGCCTTGTTTTTCTATTGATATAAATT 3162 Query 5207 CGAGTTATCCTTACGTGATGTATCATGAGAAAATTCCAACATGGCTATACTTTTATG-GG 5265 || |||||||| || ||||||||||||||||| ||||| | ||| | ||||| | Sbjct 3161 CGTCATATCCTTATGTAATGTATCATGAGAAAATACCAACTTACTTATCTTCTTATGATG 3102 Query 5266 CATTACTCAAA-ACCAACATTAATCCCTACTTTTTTAGATGATGATAATTATTTTTCATT 5324 ||| | ||| |||| | | ||||| |||||| || || || | || || | Sbjct 3101 AATT--TGAAAGTGAAACAATCGTTTCTACTAACTTAGATAATTATGATAAATTCACACT 3044 Query 5325 ATATAAGATTGATAAAGAGGTATTTAACGATGAGGTATTAATTAAAAT--CAAATCACGC 5382 || || || ||| | ||||||| ||| | || || | || || | | Sbjct 3043 TTACAAAATGACGAAACAATCATTTAACTTTGATATTTTGTTTCATATAGAAAGTGATAT 2984 Query 5383 GTACTACGTCAGATGATTGTTAAATACTA--------CAATA----ATGATNNNNNNNNN 5430 | | || | |||| ||||||||||||| || || | ||| Sbjct 2983 G-ATTAAG-AAGATACTTGTTAAATACTATGCCACTGCATTAAAAGAGGATAAAGACTAT 2926 Query 5431 NNNNNTATCAACACAAACACATTAAGAATGATACAAGACATTACGGGTATTGA--TTGCA 5488 ||| || |||||||| ||| | ||||| | || | || | | || | || Sbjct 2925 ATTAATATTAATACAAACACTTTACGTATGATTGAGGATTTAACCGACCTAGACTTATCA 2866 Query 5489 CACATAT-----ACGTGTTAATTCGTTTGTGGTATATGAATGTGAATACTTCCACGCACG 5543 | ||||| | | |||| || | | ||| |||||||| || || | Sbjct 2865 CGCATATCAACCATGAGTTATTTAACT-------TTTGACTGTGAATATTTTGGTGCTAG 2813 Query 5544 AGATATTATATTTCAAAACTATTTTATTAAAACACAAGGTAAATTAAAGAATAAAATCAA 5603 ||||| ||| ||||||||||||||||||||||||||||| | || | ||||| | Sbjct 2812 GGATATCATACACGAAAACTATTTTATTAAAACACAAGGTAAACTCAAAACCAAAATAGA 2753 Query 5604 TATGACAACACCTTACGACTATCACATTACAGATGAAATTAACGAACACCCCTACTCAAA 5663 |||| | |||||||| |||||| || ||||| || || ||| || | Sbjct 2752 TATGCCTACACCTTATGACTATACAATCACAGACGAGCCAAATGAAACAGTTTATAGTGA 2693 Query 5664 TGAAGAAGTTATGTTATCAAAAGTCGTTTTAAATGGTTTANNNNNNNTACCTGCTTTACG 5723 |||||||||||||||||||||||| || | ||||| ||| | ||||| |||| Sbjct 2692 TGAAGAAGTTATGTTATCAAAAGTTGTACTTAATGGATTATATGGTATTCCTGCCCTACG 2633 Query 5724 TTCACACTTTAATTTATTTCGTTTAGATGAAAACAATGAATTGTATAACATCATTAACGG 5783 |||||||||||||||||| ||| ||||||| || | || |||||||| ||||| || Sbjct 2632 TTCACACTTTAATTTATTCCGTAAAGATGAAGACGGTTTTTTATATAACATGATTAATGG 2573 Query 5784 ATACAAAAACACGGAACGTAATATTTTATTCTCTACATTTGTCACATCACGTTCATTGTA 5843 |||||||| || ||||| ||||| ||||||||||| ||||| || |||| ||| | || Sbjct 2572 TTACAAAAATACAGAACGAAATATATTATTCTCTACCTTTGTTACGTCACAATCACTTTA 2513 Query 5844 TAACTTATTAGTACCTTTCCAATACTTAACGGAAAGTGAAATTGACGACAATTTTATTTA 5903 ||| || | | || || ||| ||||||| ||| |||||||||||||| ||||| || Sbjct 2512 TAATCTACTTGAGCCATTACAAGACTTAACACAAAAAGAAATTGACGACAACTTTATATA 2453 Query 5904 TTGCGATACTGATAGTTTGTATATGAAATCCGTTGTGAAACCCTTGTTAAACCCCGATCT 5963 || ||||| |||||||| ||| | ||||| | | ||| | | || | || Sbjct 2452 CTGTGATACAGATAGTTTATATCTTAAATCAGCGATTAAAGATAAGATTGACGC--TTCA 2395 Query 5964 ATTT--GACCCGATAGCCTTAGGTAAATGGGATATTGAAAACGAACAGATAGATAAGATG 6021 |||| ||||||||| | |||||||||||||| |||| || || | || || || ||| Sbjct 2394 ATTTTCGACCCGATATCGTTAGGTAAATGGGACGTTGAGAATGACCGTATTGAAAAAATG 2335 Query 6022 TTTGTACTGAATCATAAGAAATATGCATA---TGAAGTGAATGGAAAGATTAAAATTGCT 6078 | |||| | || |||||||||||||| || | || || ||||| || | | || Sbjct 2334 TATGTATTAAACCATAAGAAATATGCTTACCTTAAACCAAACGGAAAAATCCATGTAGCA 2275 Query 6079 TCTGCTGGTATACCGAAAAACGCCTTTGATACA-AGCGTCGATTTTGAAACCTTTGTACG 6137 || ||| | ||| | |||| ||| | ||| ||| | || || |||| | Sbjct 2274 AGCGCAGGTGTGCCGTTAGACGCGTTTAACACAGAGCAATCA-TTCGAGGACTTTATTAA 2216 Query 6138 TGAACAATTCTTTGACGGCGCGATTATTGAAAACAATAAAAGTATCTATAATGAACAAGG 6197 | | | || | |||| || |||| | || |||||||||||||||||| ||||||| Sbjct 2215 TAATGACTTTCATCACGGTGCTGTTATCTACAATAATAAAAGTATCTATAATAAACAAGG 2156 Query 6198 TACGATTTCGATTTATCCGTCTAAAACAGAAATTG 6232 ||| ||||| || |||||||| ||||| | |||| Sbjct 2155 TACCATTTCAATATATCCGTCAGAAACACATATTG 2121 Score = 109 bits (120), Expect = 6e-20 Identities = 125/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 8051 ATTTTTAATTACTCTTAATTTATCTTTAATTTGTTCTGGCACTAACACGTCCATTTCTGC 8110 |||||| | ||| ||||||||||||||||||||||| | | || | ||||||||| Sbjct 170 ATTTTTCAGTACCTCCAATTTATCTTTAATTTGTTCTGGAAATGGTACATTCATTTCTGC 111 Query 8111 ACAATTTTCTACGATAGATAAGCCCTCATTAGCGATATAATAGAAAATCGTAATCATGAG 8170 ||||||||| ||| ||| ||||| |||| || |||||||| || ||| || | Sbjct 110 TAAATTTTCTAATATACTTAAACCCTCTGTAGCAATGTAATAGAACATGATAACTATTAC 51 Query 8171 TAAGCCACCTTTTAATTGTAAAATCTGGTCAATGATGTTAGCTAAAAT 8218 ||| |||| ||||| | ||| || | |||||| || |||| || ||| Sbjct 50 TAATGCACCGTTTAAGTTTAATATGTTGTCAATAATATTAGATATAAT 3 >seq2572 Length=8270 Score = 967 bits (1072), Expect = 0.0 Identities = 1532/2169 (71%), Gaps = 69/2169 (3%) Strand=Plus/Minus Query 14434 CAAATGCCTCAACAGTTTGTCTGTTGATTTCTCTATCtaaaaaatgaatcgtaaatgatt 14493 |||| | || || |||||||| | || ||||||||||| ||| | | |||||||| Sbjct 2141 CAAAGGATTCGACGGTTTGTCTACTAATCTCTCTATCTAAGAAACGTGTAACAAATGATT 2082 Query 14494 ttttaaaaa----gtaaatctgataactcatcttttaatgaaaaaCCTTTAAATACTTTT 14549 ||||||| || ||| || | | ||| | || ||| |||||||| | || Sbjct 2081 GTTTAAAATAACGGTCAATATGTT----CGTCTGTAAAGTGAAATCCTTTAAAAAAGGTT 2026 Query 14550 TCATTAACGATTGCTAAAACGTCTTTGTCAAATTTCAACATTTTTTGCATAAATTGAAAC 14609 || | |||||| | ||| || | |||||| || || |||||| || |||||| | Sbjct 2025 TCGTCTACGATTTTTTTAACATCATCGTCAAAACGCATCACTTTTTGAATGAATTGATAA 1966 Query 14610 TCGTCATCATAAAAAGTTAATTTATTATCATTTACAAATTCATTGAAACCtttttttATC 14669 || | || || ||||||| | ||| ||||||||||| || |||||| | ||| Sbjct 1965 TCAAAGTTATCAATGGTTAATTGTCCGTTATTAACAAATTCATTAAATCCTTTTCT-ATC 1907 Query 14670 -AATTCTGATTTAATAAAATCATATAAAGTCATTGTATATCTAGCCATTTATATCAC-TG 14727 ||||| | ||| | ||| |||| || ||||||||||||||| || || ||| | Sbjct 1906 TAATTCACTCTCAATGATTTCAAATAAGGTTGTTGTATATCTAGCCACTTGTACCACCTC 1847 Query 14728 CTT--TCATCTTTAAAAAGTGTATCTACCATTGATATTTTAGACGTTGTTTCATCATCAT 14785 | | | || || | ||| | | || || | | || |||| ||||||||||| Sbjct 1846 CGTAGTTGTCGGTAGCCA-TGTTTTGAATATCGACTTGT--GATGTTGCTTCATCATCAT 1790 Query 14786 AATACGGTT-TAATATCTAAACCATAACGTTTTGATAAAAACGTAATAGGTTCTCGACCT 14844 |||| || | |||| ||||| || |||||| ||| | ||| ||| |||||| Sbjct 1789 AATAAGGGTGTAAT-TCTAACCCGAAACGTTGGTTTAACATTTCTATACTTTCACGACCT 1731 Query 14845 TTTAAATAAATGTTACTATTTGATGTTGTAAAACCACGATTACTTTTTGCTTCTTCATCA 14904 ||||||||||||| || || |||||||| ||| ||||||||||||||| |||| Sbjct 1730 CTTAAATAAATGTTTGAGTTAGACGTTGTAAATGAACGGTTACTTTTTGCTTCTGTATCA 1671 Query 14905 GAAACACCACTTTCTTTATCAACAGCTAAAGAGTTAATACCTAAATAGTTACTTAATTCA 14964 ||||| |||||||||||||||||||||||||||| |||||| ||||| || |||| Sbjct 1670 CTCACACCGCTTTCTTTATCAACAGCTAAAGAGTTAACACCTAAGAAGTTAGATAGTTCA 1611 Query 14965 CTAATTTTATTTTGGTATTCTCTTTTCATTTCTGTTAAAGCAGGTATTACACTATTACTT 15024 || ||||| ||||| ||||||| ||||||||| | ||| | || || |||| Sbjct 1610 CTTATTTTGTTTTGATATTCTCGTTTCATTTCAACGAGTGCATTGTTAACGTAATCACTT 1551 Query 15025 GTTAAGTCAATAATATCATCATCAGCATTGAACATAGGGGACAT--TTTAACAAACGGTG 15082 | |||||| ||||| || || ||||||| || || || | ||||| || |||| Sbjct 1550 GCTAAGTCTATAATGTCCTCTTCAGCATCAAA--TAATCCACTTACTTTAATGAAAGGTG 1493 Query 15083 CACCGTTATAT-ATTTCTGATACAAGTTGATTTATTGACTCATCATTAATTTCAGATTTA 15141 || ||| | | || | | | |||||| |||| ||||| |||| ||| ||||| Sbjct 1492 AGCCATTAAAACAATTGAGTGATGAATTGATTAATTGTTTCATCGTTAACTTCCGATTTG 1433 Query 15142 AATATCTTGCTAAATTTAGCTTGCATAATCAATGAAAAACGAGATAAAACTACTTCTGCT 15201 ||||| || |||||| | ||||||||| | |||||||||| ||||| | ||||||| Sbjct 1432 AATATTTTAGCAAATTTGGATTGCATAATAAGTGAAAAACGACTTAAAATGATTTCTGCT 1373 Query 15202 AATTCATCTGTATAATGCTCTATAATTTCAATATCACTATTATATTGT-ATAGGTTTGTT 15260 |||||||| ||| || |||||| || ||| |||| || ||| | ||||| || Sbjct 1372 AATTCATCACAATAGTGTGAAATAATTGCATAGTCATTATT-TAGTGTTACTGGTTTATT 1314 Query 15261 TTGCATAACAACAAAATTACCACTCATACAGTTATCATATTGTTTATGAATTTGTAAGCA 15320 | |||||||| ||||| ||| |||| || ||||| | || | |||| ||| Sbjct 1313 TCTCATAACAATAAAATCACCTGATTTACAATTGTCATAATATT---GTATTTCTAAAGC 1257 Query 15321 TTCATCTGGTATTAAATAGTCAGGTACAATAAAATAAATATCTTCTTTTGTTAATCGTTT 15380 | ||| || ||| || | ||| | | ||||| || |||| | ||||||| Sbjct 1256 GTAATCAGGGCGTAAGTATTTAGGAATAGTAAAACGTATGTCTTTCTCGTTTAATCGGCG 1197 Query 15381 TTGAAATTGGAAATTAAAGTTAGATGAAAAATTTGGTGCT-TGATTAAAATAAGTATTAT 15439 || ||| || ||||||||| | ||||| | || | ||| ||| | |||| | Sbjct 1196 TTCAAAAGCAAAGTTAAAGTTATTT-AAAAAGTCACCACTATTTTTATAATGATTATTTT 1138 Query 15440 TTACATAACCAAGTATCATAATTTGTTTATTTCTAGCTTCTCCAACAACTACATTAATAT 15499 || |||||| |||||||||||||| | ||||||||| | ||||||||||| | | | Sbjct 1137 CTATATAACCTAGTATCATAATTTGGTCATTTCTAGCCTTACCAACAACTACCTGATAAC 1078 Query 15500 TTTGCCTTAATGCAGACTCTAACTGTATAAAATCTATACCAACCGTGTCACG---ATTGG 15556 ||| | |||||||| ||||| |||| |||||||||| || | ||| ||| | Sbjct 1077 CTTGACGTAATGCAGTTTCTAATTGTAAAAAATCTATAGACACGCT---ACGTTTATTTG 1021 Query 15557 TATAGTTTATAAGTAGGGGTAAAAATTCCAAATAACGATTAAACATAAGACGTTTAAATC 15616 ||||||| || |||||||||| ||||||||||||||||||||| ||||| | ||||| Sbjct 1020 TATAGTTAATCAGTAGGGGTAGAAATTCCAAATAACGATTAAAAATAAGCCTACGAAATC 961 Query 15617 TGTTGCGATGTTCAACAACTCTTTTGTTGATTTCTTTTGATAA------TTCAACGTTTA 15670 || | |||||| | ||| | | | || || | ||||| ||||||| | Sbjct 960 GATTTCTATGTTCGATAACACGCAGGCTTATGTCCTCAGATAACTCTGTTTCAACGCCAA 901 Query 15671 AAC-----CTCTTTTA---TCATTG--TTCATATTTTA-CGCTCCTTT----TTATTCTG 15715 | || ||| | | || | || || ||| ||||||||| ||||||| Sbjct 900 CATGTTCACTATTTGAATGTGATAGATTTGTCATGTTAACGCTCCTTTAAAGTTATTCTT 841 Query 15716 TTGGTTCTTCCTCTGGCTTTGGTGTTACTTCTTGGTC---AGTAATTAAGATTTTATTAA 15772 ||| || ||| || | ||| || | | || ||| ||||| ||||| || | Sbjct 840 CTGGGTC---CTCAGGTT-----GTTCCT-CAGGCTCTGAAGTGATTAAAATTTTGTTGA 790 Query 15773 AGAATGGGCTAATAGCTTTGAATGAATAGTAATGTATCCAGTGTGTAACTTCGTCAAATT 15832 ||||||| || || |||||| || || |||||||| ||||||||||| ||||||| Sbjct 789 AGAATGGTGAAACAGATTTGAAGCTGTAATAGTGTATCCAATGTGTAACTTCATCAAATT 730 Query 15833 CTGCATTATGGAATGGtttttttAACATACCTTTTGTATAGCGTTTGTATTTAATTGCAT 15892 | | |||| |||||||||||| | |||||| ||||||| ||||||||||| | || | Sbjct 729 CACCGTTATAGAATGGTTTTTTAAGCATACCGTTTGTATTACGTTTGTATTTCAAAGCGT 670 Query 15893 TAATGTCTAAGATAAACGCATATAAATCTGATTTTGGTTTAATTTCTTCAATATTACCAG 15952 |||| || || || || || ||| || | ||||||| ||| | ||||||| Sbjct 669 TAATATCGAAAATGAAAGCGAATAGGTCACTATCAGGTTTAACCTCTGTTACATTACCAA 610 Query 15953 TAAACTCTTTAAGTTTAGAAACATCATAAGTAAATACTGAACCAACTGGAATTGTGTCTC 16012 ||| || | ||| |||| ||| ||||||| || ||| | || || | || | Sbjct 609 CAAATTCAGTTTGTTGTGAAATGTCAAAAGTAAAAGTTGTACCCTCAGGGATAATATCAC 550 Query 16013 CAATTTGTGACTGATAATCCCCGTAAGCACGTAAAAAGTCAATTGTATCTTGATTTTGTA 16072 ||||||| | |||||||| ||| || ||||||| || ||||| || | | || || Sbjct 549 CAATTTGAGCTTGATAATCACCGAAACCACGTAAGTAGGTGATTGTGTCATTTTCTTCTA 490 Query 16073 ATTTAAATTCTTTCGTTACTTTAAACACGCCGCCTAAATCATCAAAGCTAATAACATGGT 16132 || | | || | ||| ||| |||| |||||||| || ||||||||||| ||||||| Sbjct 489 ATGTTACATCATCAGTTGTTTTGTACACACCGCCTAAGTCGTCAAAGCTAATTACATGGT 430 Query 16133 CTGTGAAGTCAATACCAGCGATTTGGAAAGTGTTCGCAATTTTTGTATCTAATAAATAAG 16192 |||| |||||||| || | |||||| ||||| |||||||||||||||||||| | | Sbjct 429 CTGTAAAGTCAATGCCTGATGCTTGGAATGTGTTAGCAATTTTTGTATCTAATAAGAATG 370 Query 16193 ATTTTAATGAATCTGTTGTTAAAATAACAATGTCTTTTAACTTAGACACAGTTGTGTATT 16252 |||| | |||||||||||||||| |||| || || ||||| || |||||||| Sbjct 369 ATTTAATACTATCTGTTGTTAAAATAGCAATATCAGACAATTTAGAAACTGTTGTGTAAC 310 Query 16253 GACCAATAGCACCACCAGAAGCACGATGTACCTCATTATATTTAGCACTATTGTTTTGTA 16312 ||||||| | ||||| |||||| || | ||||| ||||| |||| || ||||| | Sbjct 309 GACCAATTGACCCACCTGAAGCAGTATTAGCTTCATTGTATTTGTCACTGTTATTTTGCA 250 Query 16313 AGTTAAGAATTGCTTCAAATACTTTACTGGCTAAATCTTCTTTTGATGTTGTTTTGCGAA 16372 ||| || | ||||||||||||||||| ||||||||||||| |||||| | | |||| Sbjct 249 TGTTTAGTACAGCTTCAAATACTTTACTTGCTAAATCTTCTTGTGATGTAGCGTAACGAA 190 Query 16373 TGTTTGATTCTGATAATTGATTTAATGAGTAATCAACTAACATTGCACGCATTTCTTTTT 16432 | ||||| || |||||||| || | || || ||||| | ||| ||||| |||||||||| Sbjct 189 TATTTGAGTCAGATAATTGGTTAATTGCATAGTCAACAACCATGGCACGGATTTCTTTTT 130 Query 16433 CTTCTAATACATTAATATCAGAAATTTTCTTTTTATAAACACCTAAAGCGTAATTTGTTG 16492 ||||| ||| |||||||||||||| || || || | || ||| || || ||||| | Sbjct 129 CTTCTTCTACGTTAATATCAGAAATCTTTTTCTTCAATACTGCTAGGGCATAGTTTGTAG 70 Query 16493 CGTCTGCTAATGTTTGGAAATTAAAACGTGTATCATTATTATTTAATGTGAAtttttgtt 16552 |||| |||| || ||| |||||||||| ||| |||||||||||||| |||||||||| Sbjct 69 CGTCACCTAAGTCTTTGAAGTTAAAACGTGCATCGTTATTATTTAATGTAAATTTTTGTT 10 Query 16553 tttttACAA 16561 |||| |||| Sbjct 9 TTTTAACAA 1 Score = 585 bits (648), Expect = 3e-163 Identities = 1081/1573 (69%), Gaps = 38/1573 (2%) Strand=Plus/Minus Query 8702 GGTACACTAATTTTCATCGTTAAACCGTTAATACTGTTTGCGATTTGGAATGCGTTTCCC 8761 |||| || |||||||| ||||||||||||||||| || || |||||||| || || ||| Sbjct 8188 GGTATACCGATTTTCATTGTTAAACCGTTAATACTATTCGCAATTTGGAAAGCATTACCC 8129 Query 8762 ATTTCTGATTCAGTCACTGACGGTGGTTGTAATGCTAAATCTTTATATTCTGCTTGTTGT 8821 |||| | ||| ||||||||||||||| |||| |||||||||||||||||||| Sbjct 8128 ATTTGACTTGAAGTTGTTGACGGTGGTTGTAAAGCTAGGTCTTTATATTCTGCTTGTTGG 8069 Query 8822 TGTTTGTAGAAATTATATTCTTCATTAAACTTACCAAATAAAGCAGTCGGACTTAAATTA 8881 | || || | | ||||| |||||||| |||| |||||| ||||| || | ||| Sbjct 8068 TTTTGATAATATGTGTATTCATCATTAAATTTACTAAATAATTGTGTCGGGCTGATATTG 8009 Query 8882 CTTGCTACACTTACAGCGTCATAAAAGCGTGATTTAGGGTCACTACCATTTAATACATTA 8941 ||| | |||| | | ||||| || |||||| ||| ||| | | ||| Sbjct 8008 GATGCAATACTTGCCACATCATAGAATTTAGATTTAATGTCGTCACCTGTAGCAATATTT 7949 Query 8942 TCTATACGACTTGTGATTAATTGACTTTCTGCATTACGCTGTCTATTGGCTTGTTGTGAT 9001 | |||| |||| |||||||||||||||||||| | | || |||||||||||| Sbjct 7948 TGCGCACGATTTGTTATTAATTGACTTTCTGCATTTTTCACACGGTTAGCTTGTTGTGAT 7889 Query 9002 TGTCCTAAAATACCATTATTGATTAATATTGGTACTTGTGCAAAACTATTAAATGTTATA 9061 |||||||| |||||||||| ||||| | |||||||| ||||| |||| |||||| || Sbjct 7888 TGTCCTAATATACCATTATCAATTAACACTGGTACTTCAGCAAAGCTATCAAATGTAATT 7829 Query 9062 TTTGTATTTAAGAATGAACCTGTATCAATTAATATATCTTTATTTTTAGAAAGTATCGGT 9121 || ||||||||||| ||||| || || ||||| || ||| | || || ||| Sbjct 7828 GCAGTGTTTAAGAATGACCCTGTGTCTATCAATATCTCACCATTGGTTGATTTAATGGGT 7769 Query 9122 CTATCATTTTCAGCACTGTTATAATCTACTGGATAAACTCGCACTTCATTATGATAACCA 9181 || |||| | ||||||| || || ||||||| || |||||||||||| |||| Sbjct 7768 TGTTCTGCTTCACCTTTGTTATAGTCAACGGGATAAATTCTAACTTCATTATGAAAACCG 7709 Query 9182 ATGATTGACTTTGTACGTAACTTAACACCTGTTTTTTCTGATATTTTACCAGCGTCGAGT 9241 || ||||| || || | ||||| |||||||||| || ||| || || ||||| | | Sbjct 7708 ATAATTGATTTCGTTCTAAACTTCACACCTGTTTCGGGTGTTATCTTCCCTGCGTCTAAT 7649 Query 9242 AACATTGTATTACCATTCCAATCATAAAATTCAATAGTCATGTATTCATTACGTATCATA 9301 ||||| | | ||| ||||| ||||| ||| || || | ||||||||||| | | | Sbjct 7648 AACATAGCGTCACCGTTCCATGAATAAACTTCTATTGTAAAATATTCATTACGGACTAAA 7589 Query 9302 TGTTTAAATTCATCTTTTTTAGATAACATC-ATCTCTTGAAGTTTTTCAAAACTTAATGA 9360 || | |||| || || |||| | | | | | || || | |||||| | Sbjct 7588 TGACGTAGTTCAGGTTGATT-GATACCTGCTAAATTTAAAAATTCGTTAAAACTCATATT 7530 Query 9361 TAAATCGTTTAAACTCCATTCTTTTGATTTACCACCTTGTTTTAATGTTTTTAAACCTTT 9420 ||||| || |||| ||| || ||| ||||||||| || || ||||| Sbjct 7529 TAAATTAGGTAGTGACCATGTTTTAGAACGGCCATTACTTTTTAATGTGTTCAATCCTTT 7470 Query 9421 AATACTTTCACTTGATTTTACATCTTCTAAATCTTTTTCATTAATAAAGTCTTTAGGTAA 9480 |||| |||| | ||| ||| | ||||||| | || |||||| | || ||||| Sbjct 7469 AATATCTTCATCGGTTTTGACACTTACTAAATCACTACTATCAATAAACTTTTCAGGTAT 7410 Query 9481 CATTTGAACCTTTTGAAAGTTTTGTGTAATCCATGGATAAGCACTCATTTTATCCATAAA 9540 |||||| | ||||| |||||||| ||||||||||| || ||||||||||||||||| Sbjct 7409 CATTTGTATTTTTTGGAAGTTTTGAGTAATCCATGGGTATTTGCTCATTTTATCCATAAA 7350 Query 9541 ATTAATAAAGTCACCATATTCCATGACGTATAAGTTGACTGGTGATGTGATATTATCATA 9600 ||||| ||| | || | ||||| |||||| || ||||| || |||| ||||| Sbjct 7349 ATTAACAAAATTTGAATGTGACATGATGTATAAATTAACTGGACTCGTCATATAGTCATA 7290 Query 9601 TATCGTACCCTTAGACGTATCTAAGTTTGGCTCTTTTTTCGTACCAAATTTCTTTGATAA 9660 | || || || ||||||| || ||||||||||| |||| ||||| || ||||| Sbjct 7289 AGTTAATCCTTTTGAACTATCTAAATTAGGCTCTTTTTTACTACCGAATTTTTTAGATAA 7230 Query 9661 ATCAGCACTTGACTGGAATAAAACCAAAT--TTTCCAAATACTGTTGCATTTGGTTATAA 9718 ||||||||||| || || | ||| | | || |||||| |||| | | ||| Sbjct 7229 GTCAGCACTTGATTGAAACATAACATAGTTGTTACCAAAT--TGTTCTAAGTAGTTTCTT 7172 Query 9719 ACATAGTTTTTATTCGATACTTTTAACACATCATCATTGTTACGTAACATCGGTAACATA 9778 ||||| |||||| | |||| || ||||||||||| |||||||| |||||||| Sbjct 7171 GAATAGTATTTATTTGTCGCTTTCAATACATCATCATTATTACGTAAATAAGGTAACATG 7112 Query 9779 TAGTTATACGTGCG-TTTTGATAAATGTTGTCGTTCAATATTAACG-TTTGATAGTTGCT 9836 || | ||| || | ||||| ||||||||| ||||| | | || ||||| ||| Sbjct 7111 TATTCATA-TTGAGATTTTGGTAAATGTTGACGTTCCACACGTGCGTTTTGAATGTT-AG 7054 Query 9837 CTAATACATTACCTTGCGTGTACGTCATAATAGTATCAATCACAAAATATATTTTAACCA 9896 ||| ||||||||||| || || ||||| || || ||||| || ||| |||| || | Sbjct 7053 ATAAAACATTACCTTGTGTATAAGTCATGATTGTGTCAATAACCAAAGTCATTTGAATTA 6994 Query 9897 CAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATAACGTCTGTCCTCAAAAT 9956 || ||||||||||| | |||||| Sbjct 6993 CATTATCGTTAATATATTCAATCGCATTAACAAAAGCGTAATAACGTCTATTCTCAAACC 6934 Query 9957 CTGATAAAAACGTCATATAGTTAATCCCTTGTGCGTCATGCCACTGCAAAT---CAACAT 10013 ||||| ||||| ||||||||| ||||| || ||| ||| | || | || | Sbjct 6933 CTGATTTGAACGTACAATAGTTAATACCTTGAGCTTCACTCCAATTCATTTGTGGTACTT 6874 Query 10014 TAATTTCCAT---TCTATCACGAATAAAATTATACGGTTGTTTTGAATAGTCTAA-AGAT 10069 ||| | || | || || ||||||||| | || |||| || |||| | | Sbjct 6873 TAA---CAATGGAGCGGTCGCGTATAAAATTAAATGGGATTTTTTCGTA-ACTAATTGCT 6818 Query 10070 TTAAAATGACGACCGTTTAAAAAATAATCATCACGTTCTTTATTACTATTAAAATGAATT 10129 |||||||| | ||| ||| |||| ||||||||||||| |||||| ||||||| || Sbjct 6817 TTAAAATGTCCACCATTT-AAAAGTAATCATCACGTTGCGCATTACTGCTAAAATGTATC 6759 Query 10130 GTATTTTGATAGTCTG-TAAACGGTGTGTTATAGAAAAACTTAAAATTTGTTAATTTTCT 10188 || |||||||| |||| |||| ||||||| |||||||||| ||| | || | |||| | Sbjct 6758 GTGTTTTGATAATCTGTTAAAAGGTGTGTCATAGAAAAACACAAATTCTGAT-GTTTTGT 6700 Query 10189 ----CAT--TTTTACCTCC-ATA---AAAAATA--GTCGTATAAATTATTTATACGACTA 10236 ||| ||| |||||| ||| ||||||| | || ||| | | | ||| || Sbjct 6699 AAGCCATTATTTAACCTCCTATATATAAAAATAAGCACATACAAACTGTATGTAC--TTA 6642 Query 10237 TTATATCATTTTT 10249 ||||||||||||| Sbjct 6641 TTATATCATTTTT 6629 >seq2740 Length=4841 Score = 109 bits (120), Expect = 6e-20 Identities = 188/268 (70%), Gaps = 5/268 (2%) Strand=Plus/Plus Query 8048 ATCATTTTTAATTACTCTTAATTTATCTTTAATTTGTTCTGGCACTAACACGTCCATTTC 8107 |||| ||||||| ||| | ||| || ||||| | || ||||| || ||||||| Sbjct 1250 ATCACTTTTAATAACTTGAAGTTTTTCAGCAATTTCCTTAGGAACTAATACACCCATTTC 1309 Query 8108 TGCACAATTTTCTACGATAGATAAGCCCTCATTAGCGATATAATAGAAAATCGTAATCAT 8167 || ||||||||||| || ||| || ||||| || | ||||| | | |||||||| Sbjct 1310 AGCGCAATTTTCTACAATGCTTAATCCTTCATTTGCTAAGTAATAAAGTAATGTAATCAT 1369 Query 8168 GAGTAAGCCACCTTTTAATTGTAAAATCTGGTCAATGATGTTAGCTAAAATGATAATACA 8227 | | ||||| |||| | | || || || || || ||||||||||| |||||||| Sbjct 1370 TAACAGTCCACCATTTAGCTCAAGTATTTGATCTATAATATTAGCTAAAATAATAATACA 1429 Query 8228 GAATATCAATAattttttagcaaaacctttcattgattttttagaccatagattattatt 8287 ||||||| | |||| | || ||||| ||| ||||| | |||| || ||| | Sbjct 1430 -AATATCATCATTTTTCTCGC-AAACCAAACATGGATTTACGACTCCAT--ATGATTTGT 1485 Query 8288 tttaattgctttagCAAAACCAGTTACA 8315 ||||| |||||| || | ||||| ||| Sbjct 1486 TTTAAATGCTTTTGC-CATCCAGTAACA 1512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 57046614667800