Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_023550.1
Length=17869
Score E
Sequences producing significant alignments: (Bits) Value
seq2620 1169 0.0
seq2572 967 0.0
seq2740 109 6e-20
>seq2620
Length=5891
Score = 1169 bits (1296), Expect = 0.0
Identities = 2353/3455 (68%), Gaps = 158/3455 (5%)
Strand=Plus/Minus
Query 2881 TTTAATACTGTAAATGACATAATAAACTATTATAAGGAG--CAAAAATATGGTAAAACAA 2938
|||||| | ||||||| || |||||||||||| |||| || ||| ||| ||||
Sbjct 5520 TTTAATTCAATAAATGATATTATAAACTATTAT--GGAGGTCATAAACATG----AACAG 5467
Query 2939 AATCGTCTAGACATGGTAAGAGATTATCAAAATGCAGTCAATCATGTAAGGaaaaaa-aT 2997
| |||||| || | | | |||||||| | | | || || || ||| || ||
Sbjct 5466 A-----CTAGACGAAGTCAAACAATATCAAAACGTATTAAA-CAAGTTTCAAAAGAAGAT 5413
Query 2998 ACCTGATAATTATAACCAAATTGCATTAGTAGATGAATTAATGAACCCTGATATTGATTT 3057
||| | || || || ||||| | | | | | ||| | |||||| |||||||||||
Sbjct 5412 ACCCAAAAAGTACAATCAAATAGAACTTGCTAACGAACTTATGAACAAAGATATTGATTT 5353
Query 3058 TTATATCTCTATATCAAACCGTTCAGACGGTAAATCATTCAATTATGTATNNNNNNNNNN 3117
|| || ||||| || |||||||||||||||||| |||| || || | |
Sbjct 5352 TTTAATATCTATTTCCAACCGTTCAGACGGTAAAACATTTAACTACATTTCATTTTTTAT 5293
Query 3118 NNNNNNNGCTATGAAACTGGATATTAAGTTTACATTGATATCACGTCATTATACATTACG 3177
|||| || | | ||| || ||| |||||| ||||||| ||||| ||||
Sbjct 5292 GAAACTATCTATCGAATTAGGTATAAAATTTGTATTGATTGCACGTCACTATACCCTACG 5233
Query 3178 TGACGCATATCGTGATTTTATAGAAAAAAT---CATTGACGAAAACCCACTATTTAAATC 3234
| |||| || ||||| | ||| | ||||| ||| || | | ||| |||||
Sbjct 5232 TAACGCCTACCGTGAACTGATAAATAAAATAGCCATGGAGCATGATG-ACT--TTAAAGA 5176
Query 3235 AAAACGTGTCACTTTCAGAAGTGCTAGAGATTATTTAGCTATTATCTATCAAGATAAAGA 3294
|||| | | | ||| | || | || |||| | | || | | | | | ||||||
Sbjct 5175 AAAA-GACTTA-TTTATGCAGCG-TACAGATGACTATATTAATGTTGGTTATGGTAAAGA 5119
Query 3295 AAT-AGGTGTG--ATTACAGACTTAAATAGTGCAACTGATTTGAAGTATCATTCTAACTT 3351
|| | |||| |||||||||||||| | ||| |||||||| || ||||| ||||||||
Sbjct 5118 AAGCATGTGTATTATTACAGACTTAAACAATGCGACTGATTTAAAATATCACTCTAACTT 5059
Query 3352 TTTAAAAGACTTTCCAATCATTATTTATGATGAATTTTTAGCACTTGAAGATGACTATTT 3411
||||||||| | |||||||||| | ||||||||||| ||||| | ||| ||| || ||
Sbjct 5058 TTTAAAAGATTATCCAATCATTGTATATGATGAATTCCTAGCATTAGAAAGTGATTACTT 4999
Query 3412 AAGTGATGAGTGGGATAAGTTAAAAACGATTTATGAGTCAATCGACCGTAAACATGGCAA 3471
| ||||| ||||| || | ||||| || |||||||| || |||||||| || || ||
Sbjct 4998 ACCAGATGAATGGGACAAACTTAAAACCATATATGAGTCTATAGACCGTAACCACGGGAA 4939
Query 3472 TGTTGATTACATTGGATTTCCAAAAATATTTTTATTAGGTAATGCTGTTAACTTTTCAAG 3531
| | || | | | | || |||||| | || ||||||||||| ||||||||||| ||
Sbjct 4938 TATACCCTATTTGGAAATACCTAAAATAGTATTGTTAGGTAATGCAGTTAACTTTTCTAG 4879
Query 3532 TCCTATTTTATCTAATTTAAACATATATAATTTACTTCAGAAGCATAAAATGAACACGTC 3591
||| | | | || |||||||||| ||| |||| |||| || ||||| ||| |
Sbjct 4878 TCCCCTACTTGCGAACTTAAACATATTCAATAAACTTGAGAAACACAAAATCAACTCTAT 4819
Query 3592 AAGACTTTACAATAACAT-TTACTTAGAAATGCGCCGTAATGATTATGTGAACGAAAAAC 3650
| | || ||| | |||||| |||||| | |||||||| || || |||||||
Sbjct 4818 GCGTCAGTATGGTAATGTATTACTT-GAAATGAGACGTAATGACAATTCAAATGAAAAAC 4760
Query 3651 GTAATACACGTGCGTTTAACTCTAATGAGGATGCAATGACAACTGGGGAATTTGAATTTA 3710
||||||| | || || || | | | |||||||||||||| || |||||||| ||||
Sbjct 4759 GTAATACTAGGGCTTTCGACAGTGACAATGATGCAATGACAACCGGTGAATTTGATTTTA 4700
Query 3711 ATGAATATAATCTAGCAGATGAAAATTTAAGAAACCACATCAATCAAAATGGAGATTTCT 3770
| | || ||| |||| ||||| ||| | || || || | | |||| || |||||||
Sbjct 4699 ACAATTACAATTTAGCCGATGACGGATTACGCAATCATATTAGTAAAAACGGTGATTTCT 4640
Query 3771 TCTATATCAAGACAGATGATAAATATATCAAAGTGATGTATAATGT-AACTACTTTTATG 3829
|||| ||||| || || ||| |||||| |||||||||||||| || ||| ||| |
Sbjct 4639 TCTACATCAAAACCGAAGATGCATATATTAAAGTGATGTATAACGTGAACGACTAT---- 4584
Query 3830 ACA---AATATTATCGTGGTTCCTTATACAAAACAATATGAATTTTGTACCAAAATTAGA 3886
||| ||||| | || |||| ||| || |||||||| ||| ||||| || || |
Sbjct 4583 ACAGTTAATATGAAAGTTATTCCATATGCAGAACAATATACATTCTGTACAGAAGTTCGT 4524
Query 3887 GATATAGACAATCATGTTACCTATTTACGTGATGATATGTTTTATAAAGAAA-ATATGGA 3945
||| | || || | | |||||||||| || | || | ||||||||| | ||| |
Sbjct 4523 GATGTTGAGGATAAAGCTACCTATTTAAAAGAAAACATCT---ATAAAGAAACACATGCA 4467
Query 3946 ACGTTATTATTACAACCCTAGCAATTTACATTTTGATAACGCTTATTCCAAAAATTACGT 4005
| | || |||| || || || ||||||||||||||||| ||||| ||| || |
Sbjct 4466 AAGAAAT-ATTATAAACCGTCTAACTTACATTTTGATAACGCCTATTCAAAATCATATAT 4408
Query 4006 GGTGGATAACGATA-ACtatttat--atttagacatgaataaaattattaaatttcatat 4062
|| |||| ||| || || || ||||| |||| || ||| |||| ||||| | ||
Sbjct 4407 TGT---TAACAATATACAATACATTGATTTAAACATTAACAAAGTTATAAAATTGTACAT 4351
Query 4063 taaaaat--gaaatgattaaaaatacatcagaatttgaaagaaaagaaaaaCAATTTGAA 4120
|| | | |||| |||||| || | || ||||||||| | |||||| | |||
Sbjct 4350 TACACAACAGAAAAAATTAAACC--CAACTGATTTTGAAAGACACGAAAAAATGTACGAA 4293
Query 4121 GATAACTATATAGA--GAA-TACGAAAAA----GT--ATCTAATGAGACAATA------- 4164
|||||||||||||| ||| || |||||| || | | ||||||| |||
Sbjct 4292 GATAACTATATAGAAAGAACTAAGAAAAACCTTGTTAAACAAATGAGATTATAATTGCGT 4233
Query 4165 ------------CG------AATT------------ATAAAGGTGTGTAAGATTATGGGA 4194
|| |||| || |||| |||||||| ||||||
Sbjct 4232 GACGAAACGCAACGTGATATAATTGTTTTATTAGCAATTAAGGAGTGTAAGAC-ATGGGA 4174
Query 4195 TTACTAGAATGCATGCAATATCATAAACATGAACGTCGAATGATTTTATATTGGGATATA 4254
||| | || |||||| |||||| |||| ||||| ||||||||||||||
Sbjct 4173 TTATTGGAGGCAATGCAAACACATAAAGGCTTACGTAAAATGACGTTATATTGGGATATT 4114
Query 4255 GAAACATTAGCATACAATAAAGTTAATGGAAGaaaaaaaCCAACCAAATATAAAAACGTA 4314
||||| ||||||||||| || | | ||||||||| ||||||| | |||||||||||
Sbjct 4113 GAAACCTTAGCATACAACAAGATAGAGGGAAGAAAACAACCAACTGACTATAAAAACGTT 4054
Query 4315 ACGTATTCTGTTGCAATTGGTTGGTTTAATGGTTATGAG--ATTGATGTTGAGGTATTCC 4372
||| ||| || |||||||| |||| | || ||||| |||||||| || |
Sbjct 4053 GTTTATAGTGTAGCTGTTGGTTGGGATAATCA--AGGAACAATTGACGTTGAGGTTTTTC 3996
Query 4373 CAAGTTTTGAATCGTTTTATGACGCTTTTTATACTTATGTAAAACGACGTGATACGATTA 4432
| |||| | || || | | | | || | || |||| | |||| || || || |
Sbjct 3995 CCTCTTTTAACTCATTCTTTAAAACATTCTTTAAGTATGCAGAACGCAAAGACACAATAA 3936
Query 4433 CAAAGTCAAAAACAGATATTATTATGATTGCACATAACTGTAATAAGTACGATAATCATT 4492
| || || ||| ||| |||||||| ||||||||||||||||| || ||||| |
Sbjct 3935 CGAAATCTCGTACATCAATTGAAATGATTGCGCATAACTGTAATAAGTATGACAATCACT 3876
Query 4493 TTTTACTTAAAGATACCATGCGTTACTTTGA---TAATATCACACGTGAAAATATATATT 4549
|||||||| | |||| | | | || | |||| | | | ||||||| | |
Sbjct 3875 TTTTACTTCACGATA---TACAACATATTTACCCTAATGTAAAAGTTGAAAATTTGTTCA 3819
Query 4550 TAAAATCTGCAGAAGAAAATGAACATACACTAAAAATGCAAGAAGCTACTATCTTAGCTA 4609
| ||||| |||||| ||||||| | || | || ||| ||||||||| | ||||
Sbjct 3818 TGAAATCAGCAGAAACAAATGAAAACACTGTTAATATGAAAGAAGCTAAAACAGACGCTA 3759
Query 4610 AAAATCAAAATGTAATTTTAGAAAAACGTGTTAAATCCTCTATTAATTTAGATTTAACAA 4669
|| | | ||| | |||||||||||||||||||||| || ||||||||||| | |
Sbjct 3758 AAGAAGATAATATTGTTTTAGAAAAACGTGTTAAATCTTCAATTAATTTAGACCTTATTT 3699
Query 4670 TGTTTTTAAACGGTTTTAAATTTAATATTATCGATAACTTTATGAAAACAAATACATCAA 4729
| || ||| | |||||||||||| || | |||||||| |||||||||| ||||| |
Sbjct 3698 TTTTCTTACAAGGTTTTAAATTTGTCGTTGTTGATAACTTCATGAAAACAACAACATCTA 3639
Query 4730 TTGCAACATTAGGTAAGAAATTACTTGATGGCGGTTACTTAACAGAATCACAACTTAAAA 4789
|||| |||||||| || ||| | || || || || | ||| | ||||||||||
Sbjct 3638 TTGCCACATTAGGAAAAAAACTCAAAGACGGTGGATATCTTACATCAGACCAACTTAAAA 3579
Query 4790 CTGATTTTAATTATACGATTTTTGATAAAGATAACGATATGACTGATAGTGAAGCGTATG 4849
| || ||| | ||| || ||||||| || | |||||| |||| ||| ||||
Sbjct 3578 CAGACTTTCAATATGATATCTTTGATATTGAAGAGGATATGGATGATGTAGAAAGTTATG 3519
Query 4850 ATTATGCTGTGAAATGTTTTGCAAAACTCACATC-TGAACAACTTACATACATTCATAAT 4908
||| ||| |||||||| |||||| | || ||| ||| | || |||||| | |||
Sbjct 3518 CTTACGCTTATGAATGTTTTAAAAAACT-AGATAATGACCAAATGACTTACATTAACAAT 3460
Query 4909 GATGTCATTATATTAGGCATGTGTCATATTCATTATAGTGATATATTCCCAAATTTTGAC 4968
|| || ||||| ||||| |||||||| |||||| ||||||||||||||| |||||
Sbjct 3459 GACGTTATTATTTTAGGTCAATGTCATATACATTATTCTGATATATTCCCAAACTTTGAT 3400
Query 4969 TATAACAAATTAACATTTTCACTTAATATTATGGAATCTTACTTGAATAATGAAATGACT 5028
||| ||| | || ||| | || || | ||| ||| |||| ||||| | ||
Sbjct 3399 TATTCAAAAATGACGTTTAGTGTAAACATCTTAGAAAGTTATATGAACAATGATTTTACC 3340
Query 5029 CGTTTTCAGTTACTCAATCAATATCAAGATATTAAAATATCTTATACGC--ATTATCATT 5086
||||||| |||| ||| || || | | || | ||| | |||| | ||||| |||
Sbjct 3339 GGTTTTCAACTACTTAAT-AAAAT-AGGCGATGGACGTATTTCATACACAGATTATTATT 3282
Query 5087 TTCATGATATGAATTTTTATGACTATATAAAATCATTTTATCGTGGTGGTTTAAATATGT 5146
|||||| | || ||||||||||||| ||| ||||| |||||||||||||||||
Sbjct 3281 TTCATGGTCGTAACCTTTATGACTATATCAAAGGTTTTTACAATGGTGGTTTAAATATGT 3222
Query 5147 ATAATACCAAATATATCAATAAACTTATTGATGAACCTTGTTTTTCTATAGACATCAATT 5206
|||| | ||||| || || ||||| |||| |||||||||||||| || || ||||
Sbjct 3221 ATAACCCTAAATACATTGGACAAATTATTAATGAGCCTTGTTTTTCTATTGATATAAATT 3162
Query 5207 CGAGTTATCCTTACGTGATGTATCATGAGAAAATTCCAACATGGCTATACTTTTATG-GG 5265
|| |||||||| || ||||||||||||||||| ||||| | ||| | ||||| |
Sbjct 3161 CGTCATATCCTTATGTAATGTATCATGAGAAAATACCAACTTACTTATCTTCTTATGATG 3102
Query 5266 CATTACTCAAA-ACCAACATTAATCCCTACTTTTTTAGATGATGATAATTATTTTTCATT 5324
||| | ||| |||| | | ||||| |||||| || || || | || || |
Sbjct 3101 AATT--TGAAAGTGAAACAATCGTTTCTACTAACTTAGATAATTATGATAAATTCACACT 3044
Query 5325 ATATAAGATTGATAAAGAGGTATTTAACGATGAGGTATTAATTAAAAT--CAAATCACGC 5382
|| || || ||| | ||||||| ||| | || || | || || | |
Sbjct 3043 TTACAAAATGACGAAACAATCATTTAACTTTGATATTTTGTTTCATATAGAAAGTGATAT 2984
Query 5383 GTACTACGTCAGATGATTGTTAAATACTA--------CAATA----ATGATNNNNNNNNN 5430
| | || | |||| ||||||||||||| || || | |||
Sbjct 2983 G-ATTAAG-AAGATACTTGTTAAATACTATGCCACTGCATTAAAAGAGGATAAAGACTAT 2926
Query 5431 NNNNNTATCAACACAAACACATTAAGAATGATACAAGACATTACGGGTATTGA--TTGCA 5488
||| || |||||||| ||| | ||||| | || | || | | || | ||
Sbjct 2925 ATTAATATTAATACAAACACTTTACGTATGATTGAGGATTTAACCGACCTAGACTTATCA 2866
Query 5489 CACATAT-----ACGTGTTAATTCGTTTGTGGTATATGAATGTGAATACTTCCACGCACG 5543
| ||||| | | |||| || | | ||| |||||||| || || |
Sbjct 2865 CGCATATCAACCATGAGTTATTTAACT-------TTTGACTGTGAATATTTTGGTGCTAG 2813
Query 5544 AGATATTATATTTCAAAACTATTTTATTAAAACACAAGGTAAATTAAAGAATAAAATCAA 5603
||||| ||| ||||||||||||||||||||||||||||| | || | ||||| |
Sbjct 2812 GGATATCATACACGAAAACTATTTTATTAAAACACAAGGTAAACTCAAAACCAAAATAGA 2753
Query 5604 TATGACAACACCTTACGACTATCACATTACAGATGAAATTAACGAACACCCCTACTCAAA 5663
|||| | |||||||| |||||| || ||||| || || ||| || |
Sbjct 2752 TATGCCTACACCTTATGACTATACAATCACAGACGAGCCAAATGAAACAGTTTATAGTGA 2693
Query 5664 TGAAGAAGTTATGTTATCAAAAGTCGTTTTAAATGGTTTANNNNNNNTACCTGCTTTACG 5723
|||||||||||||||||||||||| || | ||||| ||| | ||||| ||||
Sbjct 2692 TGAAGAAGTTATGTTATCAAAAGTTGTACTTAATGGATTATATGGTATTCCTGCCCTACG 2633
Query 5724 TTCACACTTTAATTTATTTCGTTTAGATGAAAACAATGAATTGTATAACATCATTAACGG 5783
|||||||||||||||||| ||| ||||||| || | || |||||||| ||||| ||
Sbjct 2632 TTCACACTTTAATTTATTCCGTAAAGATGAAGACGGTTTTTTATATAACATGATTAATGG 2573
Query 5784 ATACAAAAACACGGAACGTAATATTTTATTCTCTACATTTGTCACATCACGTTCATTGTA 5843
|||||||| || ||||| ||||| ||||||||||| ||||| || |||| ||| | ||
Sbjct 2572 TTACAAAAATACAGAACGAAATATATTATTCTCTACCTTTGTTACGTCACAATCACTTTA 2513
Query 5844 TAACTTATTAGTACCTTTCCAATACTTAACGGAAAGTGAAATTGACGACAATTTTATTTA 5903
||| || | | || || ||| ||||||| ||| |||||||||||||| ||||| ||
Sbjct 2512 TAATCTACTTGAGCCATTACAAGACTTAACACAAAAAGAAATTGACGACAACTTTATATA 2453
Query 5904 TTGCGATACTGATAGTTTGTATATGAAATCCGTTGTGAAACCCTTGTTAAACCCCGATCT 5963
|| ||||| |||||||| ||| | ||||| | | ||| | | || | ||
Sbjct 2452 CTGTGATACAGATAGTTTATATCTTAAATCAGCGATTAAAGATAAGATTGACGC--TTCA 2395
Query 5964 ATTT--GACCCGATAGCCTTAGGTAAATGGGATATTGAAAACGAACAGATAGATAAGATG 6021
|||| ||||||||| | |||||||||||||| |||| || || | || || || |||
Sbjct 2394 ATTTTCGACCCGATATCGTTAGGTAAATGGGACGTTGAGAATGACCGTATTGAAAAAATG 2335
Query 6022 TTTGTACTGAATCATAAGAAATATGCATA---TGAAGTGAATGGAAAGATTAAAATTGCT 6078
| |||| | || |||||||||||||| || | || || ||||| || | | ||
Sbjct 2334 TATGTATTAAACCATAAGAAATATGCTTACCTTAAACCAAACGGAAAAATCCATGTAGCA 2275
Query 6079 TCTGCTGGTATACCGAAAAACGCCTTTGATACA-AGCGTCGATTTTGAAACCTTTGTACG 6137
|| ||| | ||| | |||| ||| | ||| ||| | || || |||| |
Sbjct 2274 AGCGCAGGTGTGCCGTTAGACGCGTTTAACACAGAGCAATCA-TTCGAGGACTTTATTAA 2216
Query 6138 TGAACAATTCTTTGACGGCGCGATTATTGAAAACAATAAAAGTATCTATAATGAACAAGG 6197
| | | || | |||| || |||| | || |||||||||||||||||| |||||||
Sbjct 2215 TAATGACTTTCATCACGGTGCTGTTATCTACAATAATAAAAGTATCTATAATAAACAAGG 2156
Query 6198 TACGATTTCGATTTATCCGTCTAAAACAGAAATTG 6232
||| ||||| || |||||||| ||||| | ||||
Sbjct 2155 TACCATTTCAATATATCCGTCAGAAACACATATTG 2121
Score = 109 bits (120), Expect = 6e-20
Identities = 125/168 (74%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 8051 ATTTTTAATTACTCTTAATTTATCTTTAATTTGTTCTGGCACTAACACGTCCATTTCTGC 8110
|||||| | ||| ||||||||||||||||||||||| | | || | |||||||||
Sbjct 170 ATTTTTCAGTACCTCCAATTTATCTTTAATTTGTTCTGGAAATGGTACATTCATTTCTGC 111
Query 8111 ACAATTTTCTACGATAGATAAGCCCTCATTAGCGATATAATAGAAAATCGTAATCATGAG 8170
||||||||| ||| ||| ||||| |||| || |||||||| || ||| || |
Sbjct 110 TAAATTTTCTAATATACTTAAACCCTCTGTAGCAATGTAATAGAACATGATAACTATTAC 51
Query 8171 TAAGCCACCTTTTAATTGTAAAATCTGGTCAATGATGTTAGCTAAAAT 8218
||| |||| ||||| | ||| || | |||||| || |||| || |||
Sbjct 50 TAATGCACCGTTTAAGTTTAATATGTTGTCAATAATATTAGATATAAT 3
>seq2572
Length=8270
Score = 967 bits (1072), Expect = 0.0
Identities = 1532/2169 (71%), Gaps = 69/2169 (3%)
Strand=Plus/Minus
Query 14434 CAAATGCCTCAACAGTTTGTCTGTTGATTTCTCTATCtaaaaaatgaatcgtaaatgatt 14493
|||| | || || |||||||| | || ||||||||||| ||| | | ||||||||
Sbjct 2141 CAAAGGATTCGACGGTTTGTCTACTAATCTCTCTATCTAAGAAACGTGTAACAAATGATT 2082
Query 14494 ttttaaaaa----gtaaatctgataactcatcttttaatgaaaaaCCTTTAAATACTTTT 14549
||||||| || ||| || | | ||| | || ||| |||||||| | ||
Sbjct 2081 GTTTAAAATAACGGTCAATATGTT----CGTCTGTAAAGTGAAATCCTTTAAAAAAGGTT 2026
Query 14550 TCATTAACGATTGCTAAAACGTCTTTGTCAAATTTCAACATTTTTTGCATAAATTGAAAC 14609
|| | |||||| | ||| || | |||||| || || |||||| || |||||| |
Sbjct 2025 TCGTCTACGATTTTTTTAACATCATCGTCAAAACGCATCACTTTTTGAATGAATTGATAA 1966
Query 14610 TCGTCATCATAAAAAGTTAATTTATTATCATTTACAAATTCATTGAAACCtttttttATC 14669
|| | || || ||||||| | ||| ||||||||||| || |||||| | |||
Sbjct 1965 TCAAAGTTATCAATGGTTAATTGTCCGTTATTAACAAATTCATTAAATCCTTTTCT-ATC 1907
Query 14670 -AATTCTGATTTAATAAAATCATATAAAGTCATTGTATATCTAGCCATTTATATCAC-TG 14727
||||| | ||| | ||| |||| || ||||||||||||||| || || ||| |
Sbjct 1906 TAATTCACTCTCAATGATTTCAAATAAGGTTGTTGTATATCTAGCCACTTGTACCACCTC 1847
Query 14728 CTT--TCATCTTTAAAAAGTGTATCTACCATTGATATTTTAGACGTTGTTTCATCATCAT 14785
| | | || || | ||| | | || || | | || |||| |||||||||||
Sbjct 1846 CGTAGTTGTCGGTAGCCA-TGTTTTGAATATCGACTTGT--GATGTTGCTTCATCATCAT 1790
Query 14786 AATACGGTT-TAATATCTAAACCATAACGTTTTGATAAAAACGTAATAGGTTCTCGACCT 14844
|||| || | |||| ||||| || |||||| ||| | ||| ||| ||||||
Sbjct 1789 AATAAGGGTGTAAT-TCTAACCCGAAACGTTGGTTTAACATTTCTATACTTTCACGACCT 1731
Query 14845 TTTAAATAAATGTTACTATTTGATGTTGTAAAACCACGATTACTTTTTGCTTCTTCATCA 14904
||||||||||||| || || |||||||| ||| ||||||||||||||| ||||
Sbjct 1730 CTTAAATAAATGTTTGAGTTAGACGTTGTAAATGAACGGTTACTTTTTGCTTCTGTATCA 1671
Query 14905 GAAACACCACTTTCTTTATCAACAGCTAAAGAGTTAATACCTAAATAGTTACTTAATTCA 14964
||||| |||||||||||||||||||||||||||| |||||| ||||| || ||||
Sbjct 1670 CTCACACCGCTTTCTTTATCAACAGCTAAAGAGTTAACACCTAAGAAGTTAGATAGTTCA 1611
Query 14965 CTAATTTTATTTTGGTATTCTCTTTTCATTTCTGTTAAAGCAGGTATTACACTATTACTT 15024
|| ||||| ||||| ||||||| ||||||||| | ||| | || || ||||
Sbjct 1610 CTTATTTTGTTTTGATATTCTCGTTTCATTTCAACGAGTGCATTGTTAACGTAATCACTT 1551
Query 15025 GTTAAGTCAATAATATCATCATCAGCATTGAACATAGGGGACAT--TTTAACAAACGGTG 15082
| |||||| ||||| || || ||||||| || || || | ||||| || ||||
Sbjct 1550 GCTAAGTCTATAATGTCCTCTTCAGCATCAAA--TAATCCACTTACTTTAATGAAAGGTG 1493
Query 15083 CACCGTTATAT-ATTTCTGATACAAGTTGATTTATTGACTCATCATTAATTTCAGATTTA 15141
|| ||| | | || | | | |||||| |||| ||||| |||| ||| |||||
Sbjct 1492 AGCCATTAAAACAATTGAGTGATGAATTGATTAATTGTTTCATCGTTAACTTCCGATTTG 1433
Query 15142 AATATCTTGCTAAATTTAGCTTGCATAATCAATGAAAAACGAGATAAAACTACTTCTGCT 15201
||||| || |||||| | ||||||||| | |||||||||| ||||| | |||||||
Sbjct 1432 AATATTTTAGCAAATTTGGATTGCATAATAAGTGAAAAACGACTTAAAATGATTTCTGCT 1373
Query 15202 AATTCATCTGTATAATGCTCTATAATTTCAATATCACTATTATATTGT-ATAGGTTTGTT 15260
|||||||| ||| || |||||| || ||| |||| || ||| | ||||| ||
Sbjct 1372 AATTCATCACAATAGTGTGAAATAATTGCATAGTCATTATT-TAGTGTTACTGGTTTATT 1314
Query 15261 TTGCATAACAACAAAATTACCACTCATACAGTTATCATATTGTTTATGAATTTGTAAGCA 15320
| |||||||| ||||| ||| |||| || ||||| | || | |||| |||
Sbjct 1313 TCTCATAACAATAAAATCACCTGATTTACAATTGTCATAATATT---GTATTTCTAAAGC 1257
Query 15321 TTCATCTGGTATTAAATAGTCAGGTACAATAAAATAAATATCTTCTTTTGTTAATCGTTT 15380
| ||| || ||| || | ||| | | ||||| || |||| | |||||||
Sbjct 1256 GTAATCAGGGCGTAAGTATTTAGGAATAGTAAAACGTATGTCTTTCTCGTTTAATCGGCG 1197
Query 15381 TTGAAATTGGAAATTAAAGTTAGATGAAAAATTTGGTGCT-TGATTAAAATAAGTATTAT 15439
|| ||| || ||||||||| | ||||| | || | ||| ||| | |||| |
Sbjct 1196 TTCAAAAGCAAAGTTAAAGTTATTT-AAAAAGTCACCACTATTTTTATAATGATTATTTT 1138
Query 15440 TTACATAACCAAGTATCATAATTTGTTTATTTCTAGCTTCTCCAACAACTACATTAATAT 15499
|| |||||| |||||||||||||| | ||||||||| | ||||||||||| | | |
Sbjct 1137 CTATATAACCTAGTATCATAATTTGGTCATTTCTAGCCTTACCAACAACTACCTGATAAC 1078
Query 15500 TTTGCCTTAATGCAGACTCTAACTGTATAAAATCTATACCAACCGTGTCACG---ATTGG 15556
||| | |||||||| ||||| |||| |||||||||| || | ||| ||| |
Sbjct 1077 CTTGACGTAATGCAGTTTCTAATTGTAAAAAATCTATAGACACGCT---ACGTTTATTTG 1021
Query 15557 TATAGTTTATAAGTAGGGGTAAAAATTCCAAATAACGATTAAACATAAGACGTTTAAATC 15616
||||||| || |||||||||| ||||||||||||||||||||| ||||| | |||||
Sbjct 1020 TATAGTTAATCAGTAGGGGTAGAAATTCCAAATAACGATTAAAAATAAGCCTACGAAATC 961
Query 15617 TGTTGCGATGTTCAACAACTCTTTTGTTGATTTCTTTTGATAA------TTCAACGTTTA 15670
|| | |||||| | ||| | | | || || | ||||| ||||||| |
Sbjct 960 GATTTCTATGTTCGATAACACGCAGGCTTATGTCCTCAGATAACTCTGTTTCAACGCCAA 901
Query 15671 AAC-----CTCTTTTA---TCATTG--TTCATATTTTA-CGCTCCTTT----TTATTCTG 15715
| || ||| | | || | || || ||| ||||||||| |||||||
Sbjct 900 CATGTTCACTATTTGAATGTGATAGATTTGTCATGTTAACGCTCCTTTAAAGTTATTCTT 841
Query 15716 TTGGTTCTTCCTCTGGCTTTGGTGTTACTTCTTGGTC---AGTAATTAAGATTTTATTAA 15772
||| || ||| || | ||| || | | || ||| ||||| ||||| || |
Sbjct 840 CTGGGTC---CTCAGGTT-----GTTCCT-CAGGCTCTGAAGTGATTAAAATTTTGTTGA 790
Query 15773 AGAATGGGCTAATAGCTTTGAATGAATAGTAATGTATCCAGTGTGTAACTTCGTCAAATT 15832
||||||| || || |||||| || || |||||||| ||||||||||| |||||||
Sbjct 789 AGAATGGTGAAACAGATTTGAAGCTGTAATAGTGTATCCAATGTGTAACTTCATCAAATT 730
Query 15833 CTGCATTATGGAATGGtttttttAACATACCTTTTGTATAGCGTTTGTATTTAATTGCAT 15892
| | |||| |||||||||||| | |||||| ||||||| ||||||||||| | || |
Sbjct 729 CACCGTTATAGAATGGTTTTTTAAGCATACCGTTTGTATTACGTTTGTATTTCAAAGCGT 670
Query 15893 TAATGTCTAAGATAAACGCATATAAATCTGATTTTGGTTTAATTTCTTCAATATTACCAG 15952
|||| || || || || || ||| || | ||||||| ||| | |||||||
Sbjct 669 TAATATCGAAAATGAAAGCGAATAGGTCACTATCAGGTTTAACCTCTGTTACATTACCAA 610
Query 15953 TAAACTCTTTAAGTTTAGAAACATCATAAGTAAATACTGAACCAACTGGAATTGTGTCTC 16012
||| || | ||| |||| ||| ||||||| || ||| | || || | || |
Sbjct 609 CAAATTCAGTTTGTTGTGAAATGTCAAAAGTAAAAGTTGTACCCTCAGGGATAATATCAC 550
Query 16013 CAATTTGTGACTGATAATCCCCGTAAGCACGTAAAAAGTCAATTGTATCTTGATTTTGTA 16072
||||||| | |||||||| ||| || ||||||| || ||||| || | | || ||
Sbjct 549 CAATTTGAGCTTGATAATCACCGAAACCACGTAAGTAGGTGATTGTGTCATTTTCTTCTA 490
Query 16073 ATTTAAATTCTTTCGTTACTTTAAACACGCCGCCTAAATCATCAAAGCTAATAACATGGT 16132
|| | | || | ||| ||| |||| |||||||| || ||||||||||| |||||||
Sbjct 489 ATGTTACATCATCAGTTGTTTTGTACACACCGCCTAAGTCGTCAAAGCTAATTACATGGT 430
Query 16133 CTGTGAAGTCAATACCAGCGATTTGGAAAGTGTTCGCAATTTTTGTATCTAATAAATAAG 16192
|||| |||||||| || | |||||| ||||| |||||||||||||||||||| | |
Sbjct 429 CTGTAAAGTCAATGCCTGATGCTTGGAATGTGTTAGCAATTTTTGTATCTAATAAGAATG 370
Query 16193 ATTTTAATGAATCTGTTGTTAAAATAACAATGTCTTTTAACTTAGACACAGTTGTGTATT 16252
|||| | |||||||||||||||| |||| || || ||||| || ||||||||
Sbjct 369 ATTTAATACTATCTGTTGTTAAAATAGCAATATCAGACAATTTAGAAACTGTTGTGTAAC 310
Query 16253 GACCAATAGCACCACCAGAAGCACGATGTACCTCATTATATTTAGCACTATTGTTTTGTA 16312
||||||| | ||||| |||||| || | ||||| ||||| |||| || ||||| |
Sbjct 309 GACCAATTGACCCACCTGAAGCAGTATTAGCTTCATTGTATTTGTCACTGTTATTTTGCA 250
Query 16313 AGTTAAGAATTGCTTCAAATACTTTACTGGCTAAATCTTCTTTTGATGTTGTTTTGCGAA 16372
||| || | ||||||||||||||||| ||||||||||||| |||||| | | ||||
Sbjct 249 TGTTTAGTACAGCTTCAAATACTTTACTTGCTAAATCTTCTTGTGATGTAGCGTAACGAA 190
Query 16373 TGTTTGATTCTGATAATTGATTTAATGAGTAATCAACTAACATTGCACGCATTTCTTTTT 16432
| ||||| || |||||||| || | || || ||||| | ||| ||||| ||||||||||
Sbjct 189 TATTTGAGTCAGATAATTGGTTAATTGCATAGTCAACAACCATGGCACGGATTTCTTTTT 130
Query 16433 CTTCTAATACATTAATATCAGAAATTTTCTTTTTATAAACACCTAAAGCGTAATTTGTTG 16492
||||| ||| |||||||||||||| || || || | || ||| || || ||||| |
Sbjct 129 CTTCTTCTACGTTAATATCAGAAATCTTTTTCTTCAATACTGCTAGGGCATAGTTTGTAG 70
Query 16493 CGTCTGCTAATGTTTGGAAATTAAAACGTGTATCATTATTATTTAATGTGAAtttttgtt 16552
|||| |||| || ||| |||||||||| ||| |||||||||||||| ||||||||||
Sbjct 69 CGTCACCTAAGTCTTTGAAGTTAAAACGTGCATCGTTATTATTTAATGTAAATTTTTGTT 10
Query 16553 tttttACAA 16561
|||| ||||
Sbjct 9 TTTTAACAA 1
Score = 585 bits (648), Expect = 3e-163
Identities = 1081/1573 (69%), Gaps = 38/1573 (2%)
Strand=Plus/Minus
Query 8702 GGTACACTAATTTTCATCGTTAAACCGTTAATACTGTTTGCGATTTGGAATGCGTTTCCC 8761
|||| || |||||||| ||||||||||||||||| || || |||||||| || || |||
Sbjct 8188 GGTATACCGATTTTCATTGTTAAACCGTTAATACTATTCGCAATTTGGAAAGCATTACCC 8129
Query 8762 ATTTCTGATTCAGTCACTGACGGTGGTTGTAATGCTAAATCTTTATATTCTGCTTGTTGT 8821
|||| | ||| ||||||||||||||| |||| ||||||||||||||||||||
Sbjct 8128 ATTTGACTTGAAGTTGTTGACGGTGGTTGTAAAGCTAGGTCTTTATATTCTGCTTGTTGG 8069
Query 8822 TGTTTGTAGAAATTATATTCTTCATTAAACTTACCAAATAAAGCAGTCGGACTTAAATTA 8881
| || || | | ||||| |||||||| |||| |||||| ||||| || | |||
Sbjct 8068 TTTTGATAATATGTGTATTCATCATTAAATTTACTAAATAATTGTGTCGGGCTGATATTG 8009
Query 8882 CTTGCTACACTTACAGCGTCATAAAAGCGTGATTTAGGGTCACTACCATTTAATACATTA 8941
||| | |||| | | ||||| || |||||| ||| ||| | | |||
Sbjct 8008 GATGCAATACTTGCCACATCATAGAATTTAGATTTAATGTCGTCACCTGTAGCAATATTT 7949
Query 8942 TCTATACGACTTGTGATTAATTGACTTTCTGCATTACGCTGTCTATTGGCTTGTTGTGAT 9001
| |||| |||| |||||||||||||||||||| | | || ||||||||||||
Sbjct 7948 TGCGCACGATTTGTTATTAATTGACTTTCTGCATTTTTCACACGGTTAGCTTGTTGTGAT 7889
Query 9002 TGTCCTAAAATACCATTATTGATTAATATTGGTACTTGTGCAAAACTATTAAATGTTATA 9061
|||||||| |||||||||| ||||| | |||||||| ||||| |||| |||||| ||
Sbjct 7888 TGTCCTAATATACCATTATCAATTAACACTGGTACTTCAGCAAAGCTATCAAATGTAATT 7829
Query 9062 TTTGTATTTAAGAATGAACCTGTATCAATTAATATATCTTTATTTTTAGAAAGTATCGGT 9121
|| ||||||||||| ||||| || || ||||| || ||| | || || |||
Sbjct 7828 GCAGTGTTTAAGAATGACCCTGTGTCTATCAATATCTCACCATTGGTTGATTTAATGGGT 7769
Query 9122 CTATCATTTTCAGCACTGTTATAATCTACTGGATAAACTCGCACTTCATTATGATAACCA 9181
|| |||| | ||||||| || || ||||||| || |||||||||||| ||||
Sbjct 7768 TGTTCTGCTTCACCTTTGTTATAGTCAACGGGATAAATTCTAACTTCATTATGAAAACCG 7709
Query 9182 ATGATTGACTTTGTACGTAACTTAACACCTGTTTTTTCTGATATTTTACCAGCGTCGAGT 9241
|| ||||| || || | ||||| |||||||||| || ||| || || ||||| | |
Sbjct 7708 ATAATTGATTTCGTTCTAAACTTCACACCTGTTTCGGGTGTTATCTTCCCTGCGTCTAAT 7649
Query 9242 AACATTGTATTACCATTCCAATCATAAAATTCAATAGTCATGTATTCATTACGTATCATA 9301
||||| | | ||| ||||| ||||| ||| || || | ||||||||||| | | |
Sbjct 7648 AACATAGCGTCACCGTTCCATGAATAAACTTCTATTGTAAAATATTCATTACGGACTAAA 7589
Query 9302 TGTTTAAATTCATCTTTTTTAGATAACATC-ATCTCTTGAAGTTTTTCAAAACTTAATGA 9360
|| | |||| || || |||| | | | | | || || | |||||| |
Sbjct 7588 TGACGTAGTTCAGGTTGATT-GATACCTGCTAAATTTAAAAATTCGTTAAAACTCATATT 7530
Query 9361 TAAATCGTTTAAACTCCATTCTTTTGATTTACCACCTTGTTTTAATGTTTTTAAACCTTT 9420
||||| || |||| ||| || ||| ||||||||| || || |||||
Sbjct 7529 TAAATTAGGTAGTGACCATGTTTTAGAACGGCCATTACTTTTTAATGTGTTCAATCCTTT 7470
Query 9421 AATACTTTCACTTGATTTTACATCTTCTAAATCTTTTTCATTAATAAAGTCTTTAGGTAA 9480
|||| |||| | ||| ||| | ||||||| | || |||||| | || |||||
Sbjct 7469 AATATCTTCATCGGTTTTGACACTTACTAAATCACTACTATCAATAAACTTTTCAGGTAT 7410
Query 9481 CATTTGAACCTTTTGAAAGTTTTGTGTAATCCATGGATAAGCACTCATTTTATCCATAAA 9540
|||||| | ||||| |||||||| ||||||||||| || |||||||||||||||||
Sbjct 7409 CATTTGTATTTTTTGGAAGTTTTGAGTAATCCATGGGTATTTGCTCATTTTATCCATAAA 7350
Query 9541 ATTAATAAAGTCACCATATTCCATGACGTATAAGTTGACTGGTGATGTGATATTATCATA 9600
||||| ||| | || | ||||| |||||| || ||||| || |||| |||||
Sbjct 7349 ATTAACAAAATTTGAATGTGACATGATGTATAAATTAACTGGACTCGTCATATAGTCATA 7290
Query 9601 TATCGTACCCTTAGACGTATCTAAGTTTGGCTCTTTTTTCGTACCAAATTTCTTTGATAA 9660
| || || || ||||||| || ||||||||||| |||| ||||| || |||||
Sbjct 7289 AGTTAATCCTTTTGAACTATCTAAATTAGGCTCTTTTTTACTACCGAATTTTTTAGATAA 7230
Query 9661 ATCAGCACTTGACTGGAATAAAACCAAAT--TTTCCAAATACTGTTGCATTTGGTTATAA 9718
||||||||||| || || | ||| | | || |||||| |||| | | |||
Sbjct 7229 GTCAGCACTTGATTGAAACATAACATAGTTGTTACCAAAT--TGTTCTAAGTAGTTTCTT 7172
Query 9719 ACATAGTTTTTATTCGATACTTTTAACACATCATCATTGTTACGTAACATCGGTAACATA 9778
||||| |||||| | |||| || ||||||||||| |||||||| ||||||||
Sbjct 7171 GAATAGTATTTATTTGTCGCTTTCAATACATCATCATTATTACGTAAATAAGGTAACATG 7112
Query 9779 TAGTTATACGTGCG-TTTTGATAAATGTTGTCGTTCAATATTAACG-TTTGATAGTTGCT 9836
|| | ||| || | ||||| ||||||||| ||||| | | || ||||| |||
Sbjct 7111 TATTCATA-TTGAGATTTTGGTAAATGTTGACGTTCCACACGTGCGTTTTGAATGTT-AG 7054
Query 9837 CTAATACATTACCTTGCGTGTACGTCATAATAGTATCAATCACAAAATATATTTTAACCA 9896
||| ||||||||||| || || ||||| || || ||||| || ||| |||| || |
Sbjct 7053 ATAAAACATTACCTTGTGTATAAGTCATGATTGTGTCAATAACCAAAGTCATTTGAATTA 6994
Query 9897 CAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATAACGTCTGTCCTCAAAAT 9956
|| ||||||||||| | ||||||
Sbjct 6993 CATTATCGTTAATATATTCAATCGCATTAACAAAAGCGTAATAACGTCTATTCTCAAACC 6934
Query 9957 CTGATAAAAACGTCATATAGTTAATCCCTTGTGCGTCATGCCACTGCAAAT---CAACAT 10013
||||| ||||| ||||||||| ||||| || ||| ||| | || | || |
Sbjct 6933 CTGATTTGAACGTACAATAGTTAATACCTTGAGCTTCACTCCAATTCATTTGTGGTACTT 6874
Query 10014 TAATTTCCAT---TCTATCACGAATAAAATTATACGGTTGTTTTGAATAGTCTAA-AGAT 10069
||| | || | || || ||||||||| | || |||| || |||| | |
Sbjct 6873 TAA---CAATGGAGCGGTCGCGTATAAAATTAAATGGGATTTTTTCGTA-ACTAATTGCT 6818
Query 10070 TTAAAATGACGACCGTTTAAAAAATAATCATCACGTTCTTTATTACTATTAAAATGAATT 10129
|||||||| | ||| ||| |||| ||||||||||||| |||||| ||||||| ||
Sbjct 6817 TTAAAATGTCCACCATTT-AAAAGTAATCATCACGTTGCGCATTACTGCTAAAATGTATC 6759
Query 10130 GTATTTTGATAGTCTG-TAAACGGTGTGTTATAGAAAAACTTAAAATTTGTTAATTTTCT 10188
|| |||||||| |||| |||| ||||||| |||||||||| ||| | || | |||| |
Sbjct 6758 GTGTTTTGATAATCTGTTAAAAGGTGTGTCATAGAAAAACACAAATTCTGAT-GTTTTGT 6700
Query 10189 ----CAT--TTTTACCTCC-ATA---AAAAATA--GTCGTATAAATTATTTATACGACTA 10236
||| ||| |||||| ||| ||||||| | || ||| | | | ||| ||
Sbjct 6699 AAGCCATTATTTAACCTCCTATATATAAAAATAAGCACATACAAACTGTATGTAC--TTA 6642
Query 10237 TTATATCATTTTT 10249
|||||||||||||
Sbjct 6641 TTATATCATTTTT 6629
>seq2740
Length=4841
Score = 109 bits (120), Expect = 6e-20
Identities = 188/268 (70%), Gaps = 5/268 (2%)
Strand=Plus/Plus
Query 8048 ATCATTTTTAATTACTCTTAATTTATCTTTAATTTGTTCTGGCACTAACACGTCCATTTC 8107
|||| ||||||| ||| | ||| || ||||| | || ||||| || |||||||
Sbjct 1250 ATCACTTTTAATAACTTGAAGTTTTTCAGCAATTTCCTTAGGAACTAATACACCCATTTC 1309
Query 8108 TGCACAATTTTCTACGATAGATAAGCCCTCATTAGCGATATAATAGAAAATCGTAATCAT 8167
|| ||||||||||| || ||| || ||||| || | ||||| | | ||||||||
Sbjct 1310 AGCGCAATTTTCTACAATGCTTAATCCTTCATTTGCTAAGTAATAAAGTAATGTAATCAT 1369
Query 8168 GAGTAAGCCACCTTTTAATTGTAAAATCTGGTCAATGATGTTAGCTAAAATGATAATACA 8227
| | ||||| |||| | | || || || || || ||||||||||| ||||||||
Sbjct 1370 TAACAGTCCACCATTTAGCTCAAGTATTTGATCTATAATATTAGCTAAAATAATAATACA 1429
Query 8228 GAATATCAATAattttttagcaaaacctttcattgattttttagaccatagattattatt 8287
||||||| | |||| | || ||||| ||| ||||| | |||| || ||| |
Sbjct 1430 -AATATCATCATTTTTCTCGC-AAACCAAACATGGATTTACGACTCCAT--ATGATTTGT 1485
Query 8288 tttaattgctttagCAAAACCAGTTACA 8315
||||| |||||| || | ||||| |||
Sbjct 1486 TTTAAATGCTTTTGC-CATCCAGTAACA 1512
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 57046614667800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |