Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq322 82.4 1e-10 >seq322 Length=669892 Score = 82.4 bits (90), Expect = 1e-10 Identities = 112/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 193443 ATACCTGAAATAGGGGATAAATTTTGTTCA-GGAATGGCCCAAAAAGGAACTTGTGGTAT 193501 |||||| |||| || ||||||||| ||| || |||| | |||||||||| ||||| || Sbjct 12603 ATACCTCAAATTGGTGATAAATTTGCTTCCCGGCATGGTC-AAAAAGGAACATGTGGAAT 12545 Query 193502 GATTTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTATTAT 193561 || ||| ||||||||||| || || | ||| || ||| ||||||||||| Sbjct 12544 ACAATACAGACAGGAAGATATGCCTTTCACTTGTGAAGGCATCACACCTGATATTATTAT 12485 Query 193562 TAATCCAAATTGTATTCCATCCAGAATGACCATT 193595 |||||| | ||| || ||| | ||||| ||| Sbjct 12484 TAATCCTCACGCTATCCCTTCCCGTATGACAATT 12451 Score = 82.4 bits (90), Expect = 1e-10 Identities = 123/168 (73%), Gaps = 10/168 (6%) Strand=Plus/Minus Query 192952 ATTATCCACAAAAACCCCTTGTTACCACA-GATAT-TGCAAAATTTAATAAATTAGACGA 193009 |||||||||| ||||| ||||| || ||| ||| | || | ||||| | ||| | Sbjct 13130 ATTATCCACATAAACCTCTTGTAACAACAAGATCTATGGAGTATTTACGTT-TCAGAGAA 13072 Query 193010 TTATCCAAATGGTATTAATGCTATTGTTGCTATAGCTTGCTATACTGGTTATAATCAAGA 193069 | ||| ||||||||| ||||||| || || || |||||||||||||||||||| Sbjct 13071 CTG-CCAGCTGGTATTAACTCTATTGTGGCAATTTTATGTTATACTGGTTATAATCAAGA 13013 Query 193070 AGACAGTATTATTTTAAATAAAGCTTCTA---TTGAAAGAGGATTATT 193114 ||| ||| | || |||||| |||||| | ||||||||||| || Sbjct 13012 AGATAGTGTAATATTAAAT---GCTTCTGCAGTAGAAAGAGGATTTTT 12968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634987642199000