Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_023611.1
Length=198533
Score E
Sequences producing significant alignments: (Bits) Value
seq322 82.4 1e-10
>seq322
Length=669892
Score = 82.4 bits (90), Expect = 1e-10
Identities = 112/154 (73%), Gaps = 2/154 (1%)
Strand=Plus/Minus
Query 193443 ATACCTGAAATAGGGGATAAATTTTGTTCA-GGAATGGCCCAAAAAGGAACTTGTGGTAT 193501
|||||| |||| || ||||||||| ||| || |||| | |||||||||| ||||| ||
Sbjct 12603 ATACCTCAAATTGGTGATAAATTTGCTTCCCGGCATGGTC-AAAAAGGAACATGTGGAAT 12545
Query 193502 GATTTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTATTAT 193561
|| ||| ||||||||||| || || | ||| || ||| |||||||||||
Sbjct 12544 ACAATACAGACAGGAAGATATGCCTTTCACTTGTGAAGGCATCACACCTGATATTATTAT 12485
Query 193562 TAATCCAAATTGTATTCCATCCAGAATGACCATT 193595
|||||| | ||| || ||| | ||||| |||
Sbjct 12484 TAATCCTCACGCTATCCCTTCCCGTATGACAATT 12451
Score = 82.4 bits (90), Expect = 1e-10
Identities = 123/168 (73%), Gaps = 10/168 (6%)
Strand=Plus/Minus
Query 192952 ATTATCCACAAAAACCCCTTGTTACCACA-GATAT-TGCAAAATTTAATAAATTAGACGA 193009
|||||||||| ||||| ||||| || ||| ||| | || | ||||| | ||| |
Sbjct 13130 ATTATCCACATAAACCTCTTGTAACAACAAGATCTATGGAGTATTTACGTT-TCAGAGAA 13072
Query 193010 TTATCCAAATGGTATTAATGCTATTGTTGCTATAGCTTGCTATACTGGTTATAATCAAGA 193069
| ||| ||||||||| ||||||| || || || ||||||||||||||||||||
Sbjct 13071 CTG-CCAGCTGGTATTAACTCTATTGTGGCAATTTTATGTTATACTGGTTATAATCAAGA 13013
Query 193070 AGACAGTATTATTTTAAATAAAGCTTCTA---TTGAAAGAGGATTATT 193114
||| ||| | || |||||| |||||| | ||||||||||| ||
Sbjct 13012 AGATAGTGTAATATTAAAT---GCTTCTGCAGTAGAAAGAGGATTTTT 12968
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 634987642199000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |