Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_023693.1
Length=148612
Score E
Sequences producing significant alignments: (Bits) Value
seq2127 107 2e-18
>seq2127
Length=8356
Score = 107 bits (118), Expect = 2e-18
Identities = 331/504 (66%), Gaps = 20/504 (4%)
Strand=Plus/Minus
Query 74751 TGATCGATGGACATATTCAGTTCTTAGATCGTAATACAGGTTTAACTGTAGATCCTACAG 74810
|||| || || ||| |||| ||||| |||||||| |||||| | ||| || |
Sbjct 7774 TGATTGAAGGGCATTGGAAGTTTTTAGAACGTAATACGGGTTTAGTTAATGATAATAAAA 7715
Query 74811 TGCAACACTATGTATTAAACCCACAAAACGTTCTAGCTAATAACAGACACTTTAT----- 74865
| ||||||||| |||| |||||||||||| || ||| ||||| ||||||||
Sbjct 7714 CAGATCACTATGTACTAAATCCACAAAACGTTATATGTAACAACAGGCACTTTATAGCGG 7655
Query 74866 AAACTGGACTGCTCAAGAAGGGCAACCAAACGGGGATGCTACAACAGAAGGTCAATCCGT 74925
|||| ||| || |||| ||||| |||| || || || |||||||| |||||| |
Sbjct 7654 AAACGGGA-TG----GGAAGCACAACCGGACGGTGACGCAACCACAGAAGGACAATCCTT 7600
Query 74926 GCTTATTCTTGGTTGCGCT-TATGCATACCTAGCTTCCGGCGATACAAAGTATTTAGACT 74984
|||||||| ||| | |||||||| | || || || | | || || |
Sbjct 7599 AGCAATTCTTGG-TGCTATCTATGCATATCAGGCAACCAAAGAACCGTATTACCTACAAC 7541
Query 74985 CTGCTAAAAAATATTGGCAAGCCTATATAGATTAC-TTCTTTGGTGGTCAACCTATCCCA 75043
||||||| | | || | |||||| | || | ||||| ||||| | | | ||
Sbjct 7540 GTGCTAAAGACTTTTTCAACGCCTAT-CACATGGCGTTCTTCCGTGGTGTAGCGTTTCCC 7482
Query 75044 GATCCGCC---AGCAAAATATCGCCCTAACTGGATTATTAACGGTAAAGAACCACGTCTT 75100
||||| || | | || ||||||||| |||||| |||| ||| ||
Sbjct 7481 GATCCACCTAATGGTTCTTTGCGTTGTAACTGGATCTGTAACGGCAAAGCTCCAGTACTG 7422
Query 75101 GCACACTATCCTCTTACAGATGATGGCTACCCTACACACGGAGGTTTTAAGGGTAGCTTA 75160
||||| || || | |||| | || || || ||||| || || ||||| ||
Sbjct 7421 GCACATTACCCATT---AGATCCAGAGTATCCAACTCACGGCGGGTTCAAGGGCGTATTG 7365
Query 75161 ATGACGTGGACTAACGGTAGAACAGTTATTCCTCATGGTGCTCCACATTGGGGAGAATAC 75220
| || ||||| ||||| |||| || ||||||||| | || || | || ||||||
Sbjct 7364 TTCACATGGACGAACGGACAAACACAGATACCTCATGGTTCACCTCACTACGGTGAATAC 7305
Query 75221 CTTGATAAAGCATGGTTTGCTTTT 75244
|| ||| | ||||||||| |||
Sbjct 7304 CTCGATGCTGTATGGTTTGCCTTT 7281
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475288216596000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |