Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_023693.1 Length=148612 Score E Sequences producing significant alignments: (Bits) Value seq2127 107 2e-18 >seq2127 Length=8356 Score = 107 bits (118), Expect = 2e-18 Identities = 331/504 (66%), Gaps = 20/504 (4%) Strand=Plus/Minus Query 74751 TGATCGATGGACATATTCAGTTCTTAGATCGTAATACAGGTTTAACTGTAGATCCTACAG 74810 |||| || || ||| |||| ||||| |||||||| |||||| | ||| || | Sbjct 7774 TGATTGAAGGGCATTGGAAGTTTTTAGAACGTAATACGGGTTTAGTTAATGATAATAAAA 7715 Query 74811 TGCAACACTATGTATTAAACCCACAAAACGTTCTAGCTAATAACAGACACTTTAT----- 74865 | ||||||||| |||| |||||||||||| || ||| ||||| |||||||| Sbjct 7714 CAGATCACTATGTACTAAATCCACAAAACGTTATATGTAACAACAGGCACTTTATAGCGG 7655 Query 74866 AAACTGGACTGCTCAAGAAGGGCAACCAAACGGGGATGCTACAACAGAAGGTCAATCCGT 74925 |||| ||| || |||| ||||| |||| || || || |||||||| |||||| | Sbjct 7654 AAACGGGA-TG----GGAAGCACAACCGGACGGTGACGCAACCACAGAAGGACAATCCTT 7600 Query 74926 GCTTATTCTTGGTTGCGCT-TATGCATACCTAGCTTCCGGCGATACAAAGTATTTAGACT 74984 |||||||| ||| | |||||||| | || || || | | || || | Sbjct 7599 AGCAATTCTTGG-TGCTATCTATGCATATCAGGCAACCAAAGAACCGTATTACCTACAAC 7541 Query 74985 CTGCTAAAAAATATTGGCAAGCCTATATAGATTAC-TTCTTTGGTGGTCAACCTATCCCA 75043 ||||||| | | || | |||||| | || | ||||| ||||| | | | || Sbjct 7540 GTGCTAAAGACTTTTTCAACGCCTAT-CACATGGCGTTCTTCCGTGGTGTAGCGTTTCCC 7482 Query 75044 GATCCGCC---AGCAAAATATCGCCCTAACTGGATTATTAACGGTAAAGAACCACGTCTT 75100 ||||| || | | || ||||||||| |||||| |||| ||| || Sbjct 7481 GATCCACCTAATGGTTCTTTGCGTTGTAACTGGATCTGTAACGGCAAAGCTCCAGTACTG 7422 Query 75101 GCACACTATCCTCTTACAGATGATGGCTACCCTACACACGGAGGTTTTAAGGGTAGCTTA 75160 ||||| || || | |||| | || || || ||||| || || ||||| || Sbjct 7421 GCACATTACCCATT---AGATCCAGAGTATCCAACTCACGGCGGGTTCAAGGGCGTATTG 7365 Query 75161 ATGACGTGGACTAACGGTAGAACAGTTATTCCTCATGGTGCTCCACATTGGGGAGAATAC 75220 | || ||||| ||||| |||| || ||||||||| | || || | || |||||| Sbjct 7364 TTCACATGGACGAACGGACAAACACAGATACCTCATGGTTCACCTCACTACGGTGAATAC 7305 Query 75221 CTTGATAAAGCATGGTTTGCTTTT 75244 || ||| | ||||||||| ||| Sbjct 7304 CTCGATGCTGTATGGTTTGCCTTT 7281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475288216596000