Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_024359.1 Length=133048 Score E Sequences producing significant alignments: (Bits) Value seq3748 89.7 4e-13 >seq3748 Length=4031 Score = 89.7 bits (98), Expect = 4e-13 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 31585 CTGGTCTAGTTGGATTCGAACCAACGTATCACGGAATCAAAATCCGTTGCCTTACCGCTT 31644 |||| |||| ||||||||||||| || | ||||| ||||| |||||||||||||||||| Sbjct 3689 CTGGGCTAGCTGGATTCGAACCAGCGAGTGACGGAGTCAAAGTCCGTTGCCTTACCGCTT 3630 Query 31645 GGCTACAGACCAATAGTACCAAGTAAG 31671 ||||| || ||| || || || |||| Sbjct 3629 GGCTATAGCCCATTAATATAAAATAAG 3603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425504692627325