Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_024450.1
Length=204054
Score E
Sequences producing significant alignments: (Bits) Value
seq3178 102 1e-16
seq22 100 4e-16
seq4978 98.7 1e-15
seq341 98.7 1e-15
seq251 98.7 1e-15
seq93 98.7 1e-15
seq1493 96.9 5e-15
seq564 96.9 5e-15
seq147 96.9 5e-15
seq71 96.9 5e-15
seq884 95.1 2e-14
seq208 95.1 2e-14
seq10 95.1 2e-14
seq257 93.3 6e-14
seq2 93.3 6e-14
seq186 89.7 7e-13
seq1991 86.0 8e-12
>seq3178
Length=39119
Score = 102 bits (112), Expect = 1e-16
Identities = 72/81 (89%), Gaps = 1/81 (1%)
Strand=Plus/Minus
Query 11722 TAACCCAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGG 11780
|||| ||||||||| ||||||||||||| |||| |||| ||||| | |||||||||||||
Sbjct 3545 TAACACAGTCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGG 3486
Query 11781 TTCGATTCCCCGACGAGGAGG 11801
|||||||||||| || |||||
Sbjct 3485 TTCGATTCCCCGCCGGGGAGG 3465
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 3537 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 3478
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 3477 CCCGCCGGGGAG 3466
Score = 86.0 bits (94), Expect = 8e-12
Identities = 67/80 (84%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 3466 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 3525
Query 139413 TACTAACGAGGATTTTGGTA 139432
||||| |||||| | || ||
Sbjct 3526 TACTACCGAGGACTGTGTTA 3545
>seq22
Length=1296824
Score = 100 bits (110), Expect = 4e-16
Identities = 71/80 (89%), Gaps = 1/80 (1%)
Strand=Plus/Plus
Query 11723 AACCCAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGT 11781
||| ||||||||| ||||||||||||| |||| |||| ||||| | ||||||||||||||
Sbjct 740658 AACACAGTCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGT 740717
Query 11782 TCGATTCCCCGACGAGGAGG 11801
||||||||||| || |||||
Sbjct 740718 TCGATTCCCCGCCGGGGAGG 740737
Score = 100 bits (110), Expect = 4e-16
Identities = 71/80 (89%), Gaps = 1/80 (1%)
Strand=Plus/Plus
Query 11723 AACCCAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGT 11781
||| ||||||||| ||||||||||||| |||| |||| ||||| | ||||||||||||||
Sbjct 752144 AACACAGTCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGT 752203
Query 11782 TCGATTCCCCGACGAGGAGG 11801
||||||||||| || |||||
Sbjct 752204 TCGATTCCCCGCCGGGGAGG 752223
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 740665 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 740724
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 740725 CCCGCCGGGGAG 740736
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 752151 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 752210
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 752211 CCCGCCGGGGAG 752222
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 740736 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 740677
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 740676 TACTACCGAGGA 740665
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 752222 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 752163
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 752162 TACTACCGAGGA 752151
>seq4978
Length=4776
Score = 98.7 bits (108), Expect = 1e-15
Identities = 69/79 (87%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714
|| |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||
Sbjct 1825 TAGTCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 1884
Query 8715 TTCCCCGACGAGGAGCAGA 8733
||||||| || |||| |||
Sbjct 1885 TTCCCCGCCGGGGAGGAGA 1903
Score = 96.9 bits (106), Expect = 5e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 11728 AGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786
|||||||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||
Sbjct 1826 AGTCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 1885
Query 11787 TCCCCGACGAGGAGG 11801
|||||| || |||||
Sbjct 1886 TCCCCGCCGGGGAGG 1900
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 1899 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 1840
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 1839 TACTACCGAGGA 1828
>seq341
Length=494976
Score = 98.7 bits (108), Expect = 1e-15
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand=Plus/Plus
Query 11727 CAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
||||||||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||
Sbjct 230953 CAGTCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 231012
Query 11786 TTCCCCGACGAGGAGG 11801
||||||| || |||||
Sbjct 231013 TTCCCCGCCGGGGAGG 231028
Score = 96.9 bits (106), Expect = 5e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 11728 AGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786
|||||||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||
Sbjct 235518 AGTCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 235459
Query 11787 TCCCCGACGAGGAGG 11801
|||||| || |||||
Sbjct 235458 TCCCCGCCGGGGAGG 235444
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 189199 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 189140
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 189139 CCCGCCGGGGAG 189128
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 193675 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 193734
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 193735 CCCGCCGGGGAG 193746
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 230956 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 231015
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 231016 CCCGCCGGGGAG 231027
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714
|| |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||
Sbjct 235519 TAGTCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 235460
Query 8715 TTCCCCGACGAGGAG 8729
||||||| || ||||
Sbjct 235459 TTCCCCGCCGGGGAG 235445
Score = 93.3 bits (102), Expect = 6e-14
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand=Plus/Minus
Query 11727 CAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
|| |||||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||
Sbjct 189202 CAATCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 189143
Query 11786 TTCCCCGACGAGGAGG 11801
||||||| || |||||
Sbjct 189142 TTCCCCGCCGGGGAGG 189127
Score = 93.3 bits (102), Expect = 6e-14
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand=Plus/Plus
Query 11727 CAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
|| |||||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||
Sbjct 193672 CAATCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 193731
Query 11786 TTCCCCGACGAGGAGG 11801
||||||| || |||||
Sbjct 193732 TTCCCCGCCGGGGAGG 193747
Score = 89.7 bits (98), Expect = 7e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 189128 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 189187
Query 139413 TACTAACGAGGATTTTG 139429
||||| |||||||| ||
Sbjct 189188 TACTACCGAGGATTGTG 189204
Score = 89.7 bits (98), Expect = 7e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 193746 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 193687
Query 139413 TACTAACGAGGATTTTG 139429
||||| |||||||| ||
Sbjct 193686 TACTACCGAGGATTGTG 193670
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 231027 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 230968
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 230967 TACTACCGAGGA 230956
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 235445 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 235504
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 235505 TACTACCGAGGA 235516
>seq251
Length=308917
Score = 98.7 bits (108), Expect = 1e-15
Identities = 69/79 (87%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714
|| |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||
Sbjct 134267 TAGTCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 134326
Query 8715 TTCCCCGACGAGGAGCAGA 8733
||||||| || |||| |||
Sbjct 134327 TTCCCCGCCGGGGAGGAGA 134345
Score = 96.9 bits (106), Expect = 5e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 11728 AGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786
|||||||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||
Sbjct 134268 AGTCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 134327
Query 11787 TCCCCGACGAGGAGG 11801
|||||| || |||||
Sbjct 134328 TCCCCGCCGGGGAGG 134342
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 134341 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 134282
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 134281 TACTACCGAGGA 134270
>seq93
Length=972031
Score = 98.7 bits (108), Expect = 1e-15
Identities = 68/77 (88%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 8654 TTATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCG 8713
|| ||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||
Sbjct 74630 TTTTTCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCG 74689
Query 8714 ATTCCCCGACGAGGAGC 8730
|||||||| || |||||
Sbjct 74690 ATTCCCCGCCGGGGAGC 74706
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/72 (89%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||||
Sbjct 74634 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 74693
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 74694 CCCGCCGGGGAG 74705
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 74705 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 74646
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 74645 TACTACCGAGGA 74634
>seq1493
Length=111453
Score = 96.9 bits (106), Expect = 5e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 11728 AGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786
|||||||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||
Sbjct 104023 AGTCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 104082
Query 11787 TCCCCGACGAGGAGG 11801
|||||| || |||||
Sbjct 104083 TCCCCGCCGGGGAGG 104097
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 104025 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 104084
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 104085 CCCGCCGGGGAG 104096
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 104096 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 104037
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 104036 TACTACCGAGGA 104025
>seq564
Length=290911
Score = 96.9 bits (106), Expect = 5e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||||
Sbjct 175310 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 175251
Query 11789 CCCGACGAGGAGGGA 11803
|||| || |||||||
Sbjct 175250 CCCGCCGGGGAGGGA 175236
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714
|| |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||
Sbjct 175313 TAATCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 175254
Query 8715 TTCCCCGACGAGGAG 8729
||||||| || ||||
Sbjct 175253 TTCCCCGCCGGGGAG 175239
Score = 89.7 bits (98), Expect = 7e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 175239 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 175298
Query 139413 TACTAACGAGGATT 139426
||||| ||||||||
Sbjct 175299 TACTACCGAGGATT 175312
>seq147
Length=672183
Score = 96.9 bits (106), Expect = 5e-15
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 128389 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 128448
Query 8718 CCCGACGAGGAGC 8730
|||| || |||||
Sbjct 128449 CCCGCCGGGGAGC 128461
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/72 (89%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||||
Sbjct 128389 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 128448
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 128449 CCCGCCGGGGAG 128460
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 128460 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 128401
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 128400 TACTACCGAGGA 128389
>seq71
Length=1863596
Score = 96.9 bits (106), Expect = 5e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 11728 AGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786
|||||||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||
Sbjct 1289093 AGTCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 1289152
Query 11787 TCCCCGACGAGGAGG 11801
|||||| || |||||
Sbjct 1289153 TCCCCGCCGGGGAGG 1289167
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714
|| |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||
Sbjct 1289092 TAGTCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 1289151
Query 8715 TTCCCCGACGAGGAG 8729
||||||| || ||||
Sbjct 1289152 TTCCCCGCCGGGGAG 1289166
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 1289166 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 1289107
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 1289106 TACTACCGAGGA 1289095
>seq884
Length=173229
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 2563 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 2504
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 2503 CCCGCCGGGGAG 2492
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 7029 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 7088
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 7089 CCCGCCGGGGAG 7100
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 38258 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 38199
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 38198 CCCGCCGGGGAG 38187
Score = 93.3 bits (102), Expect = 6e-14
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand=Plus/Minus
Query 11727 CAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
|| |||||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||
Sbjct 2566 CAATCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 2507
Query 11786 TTCCCCGACGAGGAGG 11801
||||||| || |||||
Sbjct 2506 TTCCCCGCCGGGGAGG 2491
Score = 93.3 bits (102), Expect = 6e-14
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand=Plus/Plus
Query 11727 CAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
|| |||||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||
Sbjct 7026 CAATCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 7085
Query 11786 TTCCCCGACGAGGAGG 11801
||||||| || |||||
Sbjct 7086 TTCCCCGCCGGGGAGG 7101
Score = 93.3 bits (102), Expect = 6e-14
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand=Plus/Minus
Query 11727 CAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
|| |||||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||
Sbjct 38261 CAATCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 38202
Query 11786 TTCCCCGACGAGGAGG 11801
||||||| || |||||
Sbjct 38201 TTCCCCGCCGGGGAGG 38186
Score = 89.7 bits (98), Expect = 7e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 2492 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 2551
Query 139413 TACTAACGAGGATTTTG 139429
||||| |||||||| ||
Sbjct 2552 TACTACCGAGGATTGTG 2568
Score = 89.7 bits (98), Expect = 7e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 7100 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 7041
Query 139413 TACTAACGAGGATTTTG 139429
||||| |||||||| ||
Sbjct 7040 TACTACCGAGGATTGTG 7024
Score = 89.7 bits (98), Expect = 7e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 38187 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 38246
Query 139413 TACTAACGAGGATTTTG 139429
||||| |||||||| ||
Sbjct 38247 TACTACCGAGGATTGTG 38263
>seq208
Length=594663
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 1099 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1040
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 1039 CCCGCCGGGGAG 1028
Score = 93.3 bits (102), Expect = 6e-14
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand=Plus/Minus
Query 11727 CAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
|| |||||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||
Sbjct 1102 CAATCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 1043
Query 11786 TTCCCCGACGAGGAGG 11801
||||||| || |||||
Sbjct 1042 TTCCCCGCCGGGGAGG 1027
Score = 89.7 bits (98), Expect = 7e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 1028 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 1087
Query 139413 TACTAACGAGGATTTTG 139429
||||| |||||||| ||
Sbjct 1088 TACTACCGAGGATTGTG 1104
>seq10
Length=3073041
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 11729 GTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
||||||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||||
Sbjct 709775 GTCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 709834
Query 11788 CCCCGACGAGGAGG 11801
||||| || |||||
Sbjct 709835 CCCCGCCGGGGAGG 709848
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 709776 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 709835
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 709836 CCCGCCGGGGAG 709847
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 709847 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 709788
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 709787 TACTACCGAGGA 709776
>seq257
Length=825446
Score = 93.3 bits (102), Expect = 6e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716
||||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||
Sbjct 595633 TTCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 595574
Query 8717 CCCCGACGAGGAGC 8730
||| | || |||||
Sbjct 595573 CCCAGGCGGGGAGC 595560
Score = 87.8 bits (96), Expect = 2e-12
Identities = 67/78 (86%), Gaps = 1/78 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||||
Sbjct 595632 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 595573
Query 11789 CCCGACGAGGAGGGAGGT 11806
|| | || |||| ||||
Sbjct 595572 CCAGGCGGGGAGCCAGGT 595555
>seq2
Length=2384549
Score = 93.3 bits (102), Expect = 6e-14
Identities = 68/79 (86%), Gaps = 4/79 (5%)
Strand=Plus/Minus
Query 11727 CAGTCCTCGTTAGTATAGTGGTA----GTATGCCCGTCTGTCGCACGGGAGACCGGGGTT 11782
||||||||| ||||||||||||| |||| |||| ||||| | |||||||||||||||
Sbjct 446213 CAGTCCTCGGTAGTATAGTGGTAAGACGTATCCCCGCCTGTCACGCGGGAGACCGGGGTT 446154
Query 11783 CGATTCCCCGACGAGGAGG 11801
|||||||||| || |||||
Sbjct 446153 CGATTCCCCGCCGGGGAGG 446135
Score = 84.2 bits (92), Expect = 3e-11
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAG---TATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714
|||||| |||||||||||| || ||| |||| ||||| | ||||||||||||||||||
Sbjct 446210 TCCTCGGTAGTATAGTGGTAAGACGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 446151
Query 8715 TTCCCCGACGAGGAG 8729
||||||| || ||||
Sbjct 446150 TTCCCCGCCGGGGAG 446136
>seq186
Length=692473
Score = 89.7 bits (98), Expect = 7e-13
Identities = 66/76 (87%), Gaps = 1/76 (1%)
Strand=Plus/Minus
Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGA-CCGGGGTTCG 8713
|| |||||| |||||||||||| ||||| |||| ||||| | ||||||| ||||||||||
Sbjct 111337 TAATCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCCGGGGTTCG 111278
Query 8714 ATTCCCCGACGAGGAG 8729
|||||||| || ||||
Sbjct 111277 ATTCCCCGCCGGGGAG 111262
Score = 86.0 bits (94), Expect = 8e-12
Identities = 65/74 (88%), Gaps = 2/74 (3%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACC-GGGGTTCGATT 11787
|||||| ||||||||||||| |||| |||| ||||| | ||||||||| |||||||||||
Sbjct 111334 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCCGGGGTTCGATT 111275
Query 11788 CCCCGACGAGGAGG 11801
||||| || |||||
Sbjct 111274 CCCCGCCGGGGAGG 111261
Score = 82.4 bits (90), Expect = 1e-10
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGG-TCTCCCGTGCGACAAACGGGGATATTAACCACT 139411
|||| || |||||| ||||||||||| ||||||| | |||| |||||||| | ||||||
Sbjct 111262 CTCCCCGGCGGGGAATCGAACCCCGGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 111321
Query 139412 ATACTAACGAGGATT 139426
|||||| ||||||||
Sbjct 111322 ATACTACCGAGGATT 111336
>seq1991
Length=14245
Score = 86.0 bits (94), Expect = 8e-12
Identities = 61/70 (87%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 8661 TCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCC 8720
||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||| ||||||
Sbjct 12069 TCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGTTTCCCC 12010
Query 8721 GACGAGGAGC 8730
| || |||||
Sbjct 12009 GCCGGGGAGC 12000
Score = 84.2 bits (92), Expect = 3e-11
Identities = 73/88 (83%), Gaps = 2/88 (2%)
Strand=Plus/Minus
Query 11733 TCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCC 11791
||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||| ||||||
Sbjct 12069 TCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGTTTCCCC 12010
Query 11792 GACGAGGAGGGAGGTTAACGCGATCCTG 11819
| || |||| | ||| | ||| |||||
Sbjct 12009 GCCGGGGAGCCA-GTTGATGCGGTCCTG 11983
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 652649558602000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |