Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_024792.1 Length=160281 Score E Sequences producing significant alignments: (Bits) Value seq3061 91.5 2e-13 >seq3061 Length=4438 Score = 91.5 bits (100), Expect = 2e-13 Identities = 239/353 (68%), Gaps = 15/353 (4%) Strand=Plus/Minus Query 69198 TCAACAAATTTATCCGGGATAACAACTCCAATAGAAAGTGTCTTTGCA-CGAACATCCTC 69256 |||| | |||||| || ||||| || || ||| |||||| | ||| | ||| || || Sbjct 1156 TCAATCATTTTATCGGGTATAACTACGCCGATATTAAGTGT-TGAGCATCTAACGTCATC 1098 Query 69257 ATCCGCAGAAATTTTCTTCGTATCAAGGAAATCATTGATATCAGGATGGAATACGTTTAG 69316 ||||| ||| |||||||| ||||||| || |||||| | ||||||||||||||| Sbjct 1097 GTCCGCGCTAATCTTCTTCGTTGCAAGGAAGTCGAAGATATCGGCATGGAATACGTTTAG 1038 Query 69317 ATATACGCTCCCCGATCCTTGTCTTTG--CAGACCATTCGACTAGGT-TCGCTACGCCTA 69373 ||| ||||| | || | || || || | | || || || ||| || | Sbjct 1037 ATAAACGCTGGCACTACCATTTCGCTGCTCATATGTTCCG--TACGTGTCGTTAATACGT 980 Query 69374 GCCCGTTCTCTGATGAACTGCTCTGTGTTACCACAGAGATTAGACTATATCTTGGTCTTA 69433 | || ||| | |||||| | ||| ||| | || |||||||||| | || || Sbjct 979 ACGCG-TCT---TTCGACTGCTTTATGTCGCCATAAAGGACAGACTATATCATCATCGTA 924 Query 69434 GGCGTTACCCTAAGTACCTCTCCCATTTCCACCTGCTTAGGTGTACTCTACTCGGT--TA 69491 ||||||| || | || |||| ||||| | | |||| | |||||||||| || || Sbjct 923 CGCGTTACTGTACG-ACGCCTCCTTTTTCCGCATACTTATGCGTACTCTACTTAGTTGTA 865 Query 69492 CTCACTCGTGTCCTCTCGACAGGA-GCTTCCCTTTCGATAGTCGTTGCACGTT 69543 | ||||||||||| | ||| | |||||||||||||||||||| Sbjct 864 TTACGATAAGTCCTCTCGACGTAACGCTCACTGTTCGATAGTCGTTGCACGTT 812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512617849363000