Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_024792.1
Length=160281
Score E
Sequences producing significant alignments: (Bits) Value
seq3061 91.5 2e-13
>seq3061
Length=4438
Score = 91.5 bits (100), Expect = 2e-13
Identities = 239/353 (68%), Gaps = 15/353 (4%)
Strand=Plus/Minus
Query 69198 TCAACAAATTTATCCGGGATAACAACTCCAATAGAAAGTGTCTTTGCA-CGAACATCCTC 69256
|||| | |||||| || ||||| || || ||| |||||| | ||| | ||| || ||
Sbjct 1156 TCAATCATTTTATCGGGTATAACTACGCCGATATTAAGTGT-TGAGCATCTAACGTCATC 1098
Query 69257 ATCCGCAGAAATTTTCTTCGTATCAAGGAAATCATTGATATCAGGATGGAATACGTTTAG 69316
||||| ||| |||||||| ||||||| || |||||| | |||||||||||||||
Sbjct 1097 GTCCGCGCTAATCTTCTTCGTTGCAAGGAAGTCGAAGATATCGGCATGGAATACGTTTAG 1038
Query 69317 ATATACGCTCCCCGATCCTTGTCTTTG--CAGACCATTCGACTAGGT-TCGCTACGCCTA 69373
||| ||||| | || | || || || | | || || || ||| || |
Sbjct 1037 ATAAACGCTGGCACTACCATTTCGCTGCTCATATGTTCCG--TACGTGTCGTTAATACGT 980
Query 69374 GCCCGTTCTCTGATGAACTGCTCTGTGTTACCACAGAGATTAGACTATATCTTGGTCTTA 69433
| || ||| | |||||| | ||| ||| | || |||||||||| | || ||
Sbjct 979 ACGCG-TCT---TTCGACTGCTTTATGTCGCCATAAAGGACAGACTATATCATCATCGTA 924
Query 69434 GGCGTTACCCTAAGTACCTCTCCCATTTCCACCTGCTTAGGTGTACTCTACTCGGT--TA 69491
||||||| || | || |||| ||||| | | |||| | |||||||||| || ||
Sbjct 923 CGCGTTACTGTACG-ACGCCTCCTTTTTCCGCATACTTATGCGTACTCTACTTAGTTGTA 865
Query 69492 CTCACTCGTGTCCTCTCGACAGGA-GCTTCCCTTTCGATAGTCGTTGCACGTT 69543
| ||||||||||| | ||| | ||||||||||||||||||||
Sbjct 864 TTACGATAAGTCCTCTCGACGTAACGCTCACTGTTCGATAGTCGTTGCACGTT 812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 512617849363000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |