Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_027339.1
Length=38389
Score E
Sequences producing significant alignments: (Bits) Value
seq1477 257 4e-64
>seq1477
Length=14545
Score = 257 bits (284), Expect = 4e-64
Identities = 284/378 (75%), Gaps = 3/378 (1%)
Strand=Plus/Plus
Query 9253 GAGGAGTCCGCATAATGGCCCGTATCGGGGGAACCTGTTATTTCAAAATTGACGGTCAGC 9312
|||||| || |||||||||||||| | || ||| ||||||||| | ||||| | |
Sbjct 1 GAGGAGAGCGAATAATGGCCCGTATTGCTGGTACCACGTATTTCAAACTCGACGGGCTTC 60
Query 9313 AGCTATCGCTGACCGGCGGCATTGAGGTGCCCATGAACAGGACGGTCAATGATGACATCA 9372
|| | ||||| || ||||| ||||| ||||| ||||||| | ||| || ||||| | |
Sbjct 61 AGTTGTCGCTTACTGGCGGTATTGAAGTGCCGATGAACACCAAGGTAAACGATGATGTGA 120
Query 9373 TCGGCCTGGACGGTTCAGTGGACCGCAAGGAAACTCACCGTGCGCCTTATGTCAAAGGGA 9432
||||||| || ||||| || ||||| || ||||| ||||| ||||| || | ||||| |
Sbjct 121 TCGGCCTTGATGGTTCTGTTGACCGTAAAGAAACGCACCGCGCGCCCTACATTAAAGGCA 180
Query 9433 CCTTCAAGGTGCCGAAGAATTTTCCGGTGAGCAAAATCACCTCGTCTGATGAGATGACCA 9492
|||| || ||||| ||| || ||| | |||||||||||| ||| || ||||||
Sbjct 181 CCTTTAAAGTGCCTAAGGGCTTCCCGCTCAGCAAAATCACCGAGTCCGACAGCATGACCG 240
Query 9493 TCACTGCCGAGCTGGCGAACGGTCAGGTCTATGTATTGTCGTCCGCCTGGCTGCACGGAG 9552
||||| || |||||||| |||||||| ||||| || | ||||||||| || |
Sbjct 241 GTACTGCTGAACTGGCGAATGGTCAGGTGTATGTCCTGACCGAAGCCTGGCTGTTTGGTG 300
Query 9553 AAGCGAACCATAATGCCGAAGAAGGCACGGTTGATCTTGAGTTCCACGGTGAAGAAGGGG 9612
| || ||||| ||||| ||||| ||||||||||| ||||| ||||||||| |||||
Sbjct 301 AGGCCAACCACAATGCTGAAGAGGGCACGGTTGACCTTGAATTCCACGGTTCTGAAGGAT 360
Query 9613 ATTACCAGTAATGAAAGA 9630
|||||| |||||||
Sbjct 361 TCTACCAG---TGAAAGA 375
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 122688333188350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |