Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_027398.1
Length=38742
Score E
Sequences producing significant alignments: (Bits) Value
seq14394 113 1e-20
>seq14394
Length=813
Score = 113 bits (124), Expect = 1e-20
Identities = 168/235 (71%), Gaps = 4/235 (2%)
Strand=Plus/Plus
Query 17845 GTAGCGGATGCCTCACT--ATCACATAGTGATGGTTCATTACTGCTTTGTAGAATGGACA 17902
|||| ||||| ||||| ||| | | ||||||| ||||| ||| | || || |||||
Sbjct 238 GTAGTCGATGCGTCACTGAATC-CGT-GTGATGGCTCATTGCTGGTATGCAGGATGGAAG 295
Query 17903 GAGAACTGAGGATAAAAAGATATCCCAAAACCCCAAAAGCTCATCTTTAGGATTTGCAGA 17962
| || ||||||||||| | |||| || ||| | | || ||| | ||||||||||
Sbjct 296 GCGAGCTGAGGATAAAGCGCTATCGTAAGCATCCACAGCCACACCTTGAAGATTTGCAGA 355
Query 17963 AAGGTAGTCATGAACAGATACCTGCGCATGAAGACGGAACTAGTCCAGATGTGATATTTG 18022
|| || | ||| ||||||| | || || |||||||| || || |||| || ||||
Sbjct 356 CTGGCAGGCGAGAAGAGATACCAGTTCACGATGACGGAACGAGCCCGGATGCTATCTTTG 415
Query 18023 TGGTGATCGCATACATCATCAACGATGCTCGTTATGGTGAGTTTGATGACTACCC 18077
||||||| ||||| |||||||||| | ||||||||||| || | |||
Sbjct 416 GGGTGATCACATACTGCATCAACGATATGAGGGCGGGTGAGTTTGACGATTGCCC 470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 123817612258400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |