Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_028104.1
Length=73689
Score E
Sequences producing significant alignments: (Bits) Value
seq1768 86.0 3e-12
seq7 86.0 3e-12
>seq1768
Length=37857
Score = 86.0 bits (94), Expect = 3e-12
Identities = 126/176 (72%), Gaps = 2/176 (1%)
Strand=Plus/Plus
Query 65090 GTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTCTGA 65149
|| ||||||||||| | || ||| ||||| |||||||| |||| | |||| |||
Sbjct 30894 GTACCAAACTGACCTATGGGTTGTAACAAATTTATATTGTTACTTCCAACATAATTTTGA 30953
Query 65150 GCCATTCCGATAATTGCTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAATGTTCA 65209
|| | | ||||| || | ||| | |||| |||||||||||| | ||||| |||
Sbjct 30954 GCTAAGTTAACAATTGTTGACATCAAAGACACTTCGCCGTGATGATATGCAGAATGCTCA 31013
Query 65210 GAGACATATCCACTAAATTGAGCAACTTTTATTTC-CGTTGTTAAATTCTTTTTAA 65264
| ||| | ||| | |||||||||||| ||||| |||| | |||| ||||||
Sbjct 31014 GCTACAGAACCAGCTAGTTGAGCAACTTTAATTTCACGTT-TATCATTCCTTTTAA 31068
>seq7
Length=2848108
Score = 86.0 bits (94), Expect = 3e-12
Identities = 126/176 (72%), Gaps = 2/176 (1%)
Strand=Plus/Plus
Query 65090 GTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTCTGA 65149
|| ||||||||||| | || ||| ||||| |||||||| |||| | |||| |||
Sbjct 2417620 GTACCAAACTGACCTATGGGTTGTAACAAATTTATATTGTTACTTCCAACATAATTTTGA 2417679
Query 65150 GCCATTCCGATAATTGCTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAATGTTCA 65209
|| | | ||||| || | ||| | |||| |||||||||||| | ||||| |||
Sbjct 2417680 GCTAAGTTAACAATTGTTGACATCAAAGACACTTCGCCGTGATGATATGCAGAATGCTCA 2417739
Query 65210 GAGACATATCCACTAAATTGAGCAACTTTTATTTC-CGTTGTTAAATTCTTTTTAA 65264
| ||| | ||| | |||||||||||| ||||| |||| | |||| ||||||
Sbjct 2417740 GCTACAGAACCAGCTAGTTGAGCAACTTTAATTTCACGTT-TATCATTCCTTTTAA 2417794
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 235611279026250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |