Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_028656.1
Length=65955
Score E
Sequences producing significant alignments: (Bits) Value
seq3026 349 1e-91
>seq3026
Length=4301
Score = 349 bits (386), Expect = 1e-91
Identities = 451/623 (72%), Gaps = 0/623 (0%)
Strand=Plus/Minus
Query 65295 AGGTCATCAATATAATCACCACAATCTTTGCCGCACCCGCTGCAGGAAACATCCATACCA 65354
||||||||| | ||||||||| || || ||||| ||||| ||| |||||||| ||||
Sbjct 735 AGGTCATCATCACAATCACCACGATTTTGGCCGCGCCCGCGTAAGGGAACATCCAGACCA 676
Query 65355 TAGTGGCGATCAGCCAGCCGGAAATGATCGCGTTGGCAAACATCTCGCTGGGGGTGTTCT 65414
| |||||||| | ||| | ||||| | || ||||||||||| |||||||||| ||| |
Sbjct 675 TGGTGGCGATAATCCATCGTGAAATCACGGCATTGGCAAACATTTCGCTGGGGGAGTTGT 616
Query 65415 TCATCACATCCATGCCGATTTTGACAAATGCATCGCGAGTTTCTTCATTGAAGATTGGCA 65474
|||||| | || || | || || | ||||||| | || | || || ||||
Sbjct 615 CCATCACCTTTTCGCTAATCACGGTGAAGGCCTGGCGAGTTGCCTCGTCAAAAATCGGCA 556
Query 65475 TATATTCAAATGCCCACGCCGCAATACCTGTCCCGAGAATATTACCCAGCAGCACGACGC 65534
||| | ||| ||| | || | | | || |||| | ||| || |||||| | |
Sbjct 555 TATGATTAAACGCCAATGCGCCGAGCGCCGTACCGATCAAATTTCCTGCCAGCACTATGA 496
Query 65535 CCCATAACCGCATAAGTAAGCCAACGTTGCTCATTGTCGGTTTTTGCATGACGGGTAGTA 65594
|||| | || | | | || || | || ||||| ||||| || |||| ||
Sbjct 495 CCCACAGACGAAACAACAGCATAAAATTACCGCCAGTGGGTTTGTGCATCACCGGTAATA 436
Query 65595 CCGCAGTCACGGTGTTTTCGGTAAATAATTGCTGGCGGGCCATAATGACGATAATAAAAC 65654
||||||| || ||||| || || || | ||||||||| |||||||||||||| | ||| |
Sbjct 435 CCGCAGTAACTGTGTTCTCAGTGAACAGTTGCTGGCGCGCCATAATGACGATGACAAAGC 376
Query 65655 CAAAGGTATAACCGAGATTCTCCAGCAAGAAGCTGCCCGGCACACCTTCCAGTTCGACAT 65714
| ||||||||||| ||||||||||||| ||| | ||| |||||| | ||| | ||||
Sbjct 375 CGAAGGTATAACCCAGATTCTCCAGCAGGAAACCGCCTGGCACATCGGCCAAATGCACAT 316
Query 65715 GAAATATCCCTTTTGCCAGTAATGAAGCGCCCATCGACAGACCCGCCGCAATGGCTGACC 65774
| || |||||||| |||| | ||||||| ||| || || ||||| || | ||| ||||
Sbjct 315 GGAAAATCCCTTTGGCCATCAGCGAAGCGCTCATGGAGAGCCCCGCAGCCACGGCAGACC 256
Query 65775 ACAGTAGTGCCATTGCGTCGCGTTCCAGCTCTTTTTCACCATCCTGGCGGATATGCTCAT 65834
| | || ||||| ||||||| || |||||||| || |||||||||||||| | ||||
Sbjct 255 ATAATAAGGCCATGCCGTCGCGCTCTAGCTCTTTCTCGCCATCCTGGCGGATCTCTTCAT 196
Query 65835 GAATTGCCATCGCCCGGGAGGGGAGTCGATCTTCATCTATTTCTAtttttttGCCACGCT 65894
|||| || ||||| ||||| || ||||||||| | |||||| | ||| || | |
Sbjct 195 GAATGGCAGCAGCCCGTGAGGGCAGGGCATCTTCATCCACTTCTATCTCTTTCCCCTGGT 136
Query 65895 CTTTTTCTTCGCTCTCAACTTCA 65917
| ||||| |||||||| || |||
Sbjct 135 CCTTTTCGTCGCTCTCGACATCA 113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 210869695428300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |