Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_028693.1
Length=18607
Score E
Sequences producing significant alignments: (Bits) Value
seq2572 123 3e-24
>seq2572
Length=8270
Score = 123 bits (136), Expect = 3e-24
Identities = 308/455 (68%), Gaps = 12/455 (3%)
Strand=Plus/Minus
Query 16867 ACACCACCCAAGTCAGGGAATGC-AATAATACGGTCTGAGAAGTCAATACCGTTTATATG 16925
||||| || ||||| | || || ||| | | |||||| |||||||| || | ||
Sbjct 463 ACACCGCCTAAGTC-GTCAAAGCTAATTACATGGTCTGTAAAGTCAATGCCTGATGCTTG 405
Query 16926 GTATGTGTTAGCGAGTTTGCTGTCAAGTAAACGAGCTTTAATTTTTGTTGTCGTTAAAAT 16985
| |||||||||| | ||| | || | ||| | |||||| | ||| ||||||||
Sbjct 404 GAATGTGTTAGCAATTTTTGTATCTAATAAGAATGATTTAATACTATCTGTTGTTAAAAT 345
Query 16986 CATTAATTT-AGACATATCTGAAACTGTTGTGTAACGACCAATAGCACCACCTGAAGCTT 17044
| ||| | ||||| | ||||||||||||||||||||||| | |||||||||||
Sbjct 344 -AGCAATATCAGACAATTTAGAAACTGTTGTGTAACGACCAATTGACCCACCTGAAGCAG 286
Query 17045 TAGGTGCTTCGTTGTATTTGTCTTGGTTTGTTTGTAAGTTCATCATTTGTTCAGCGATTT 17104
|| ||||| ||||||||||| ||| |||| | ||| | | |||| | ||
Sbjct 285 TATTAGCTTCATTGTATTTGTCACTGTTATTTTGCATGTTTAGTACAGCTTCAAATACTT 226
Query 17105 GTTCAAAC-ATACCTTCCAAGTTATCTA-CTT--CGATTTTTTGAGAGTCAGATAGTTGG 17160
| | | | | ||| | || || || | | ||| | ||| |||||||||| ||||
Sbjct 225 -TACTTGCTAAATCTT-CTTGTGATGTAGCGTAACGAATATTT--GAGTCAGATAATTGG 170
Query 17161 TTCTCTGCGTAGTCTACTAACATACCTTTGATTTGACGTTCTTCGTCGACGTTAATATCA 17220
|| ||| ||||| || | ||| | ||||| |||||| || ||||||||||||
Sbjct 169 TTAATTGCATAGTCAACAACCATGGCACGGATTTCTTTTTCTTCTTCTACGTTAATATCA 110
Query 17221 GAGATTTTCTTTTTGTAAACAGCAATAGCATATTTAACACCATCTTTTAATGTTAACCAG 17280
|| || || || || | || || | ||||| || | | || ||| | ||
Sbjct 109 GAAATCTTTTTCTTCAATACTGCTAGGGCATAGTTTGTAGCGTCACCTAAGTCTTTGAAG 50
Query 17281 TTTTGGCGAACATCGTTATTATTTAATGTAAATTT 17315
|| || |||||||||||||||||||||||||
Sbjct 49 TTAAAACGTGCATCGTTATTATTTAATGTAAATTT 15
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 59407561371750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |